Miyakogusa Predicted Gene

Lj2g3v3007550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007550.1 Non Characterized Hit- tr|B4FMG9|B4FMG9_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55.43,3e-16,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,CUFF.39594.1
         (303 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g088860.2 | Cyclin 4 | HC | chr5:38592817-38587725 | 20130731   498   e-141
Medtr5g088860.3 | Cyclin 4 | HC | chr5:38592999-38587723 | 20130731   498   e-141
Medtr5g088860.1 | Cyclin 4 | HC | chr5:38592337-38588120 | 20130731   498   e-141
Medtr3g045180.1 | Cyclin 4 | HC | chr3:14610141-14617178 | 20130731   441   e-124
Medtr7g089090.3 | myosin heavy chain-like protein | HC | chr7:34...   318   5e-87
Medtr7g089090.2 | myosin heavy chain-like protein | HC | chr7:34...   318   5e-87
Medtr7g089090.1 | myosin heavy chain-like protein | HC | chr7:34...   318   5e-87
Medtr6g079040.1 | myosin heavy chain-like protein, putative | HC...   137   2e-32

>Medtr5g088860.2 | Cyclin 4 | HC | chr5:38592817-38587725 | 20130731
          Length = 494

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/295 (83%), Positives = 265/295 (89%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+RDFGDTMQ EAVPAVSSDV FATSRFP+Y+IGANNQIME KDDPKV+SMKEV+AR
Sbjct: 1   MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 60

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETA LL+Q NRLSVRDLA+KFEKG                     HVLLKKLRD+LESL+
Sbjct: 61  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 120

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRVAGRN+DDVE+AIAMVEALAVQLTQREGEL+QEK+EVKKLANFLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEDAIAMVEALAVQLTQREGELLQEKAEVKKLANFLKQASEDAKKLVDEE 180

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFARAEIDNAR+AVQRVEE+L+EHERMSQASGKQD+EQL KEVQEARRIKMLHQPSKVM
Sbjct: 181 RAFARAEIDNARSAVQRVEESLQEHERMSQASGKQDVEQLMKEVQEARRIKMLHQPSKVM 240

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DMEHELQALRAQLAEKTRHYLRLQKE+ RTKKGEENVPH YELEGNE LGSYLQ+
Sbjct: 241 DMEHELQALRAQLAEKTRHYLRLQKEITRTKKGEENVPHLYELEGNETLGSYLQI 295


>Medtr5g088860.3 | Cyclin 4 | HC | chr5:38592999-38587723 | 20130731
          Length = 494

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/295 (83%), Positives = 265/295 (89%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+RDFGDTMQ EAVPAVSSDV FATSRFP+Y+IGANNQIME KDDPKV+SMKEV+AR
Sbjct: 1   MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 60

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETA LL+Q NRLSVRDLA+KFEKG                     HVLLKKLRD+LESL+
Sbjct: 61  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 120

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRVAGRN+DDVE+AIAMVEALAVQLTQREGEL+QEK+EVKKLANFLKQASEDAKKLVDEE
Sbjct: 121 GRVAGRNKDDVEDAIAMVEALAVQLTQREGELLQEKAEVKKLANFLKQASEDAKKLVDEE 180

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFARAEIDNAR+AVQRVEE+L+EHERMSQASGKQD+EQL KEVQEARRIKMLHQPSKVM
Sbjct: 181 RAFARAEIDNARSAVQRVEESLQEHERMSQASGKQDVEQLMKEVQEARRIKMLHQPSKVM 240

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DMEHELQALRAQLAEKTRHYLRLQKE+ RTKKGEENVPH YELEGNE LGSYLQ+
Sbjct: 241 DMEHELQALRAQLAEKTRHYLRLQKEITRTKKGEENVPHLYELEGNETLGSYLQI 295


>Medtr5g088860.1 | Cyclin 4 | HC | chr5:38592337-38588120 | 20130731
          Length = 516

 Score =  498 bits (1283), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/295 (83%), Positives = 265/295 (89%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+RDFGDTMQ EAVPAVSSDV FATSRFP+Y+IGANNQIME KDDPKV+SMKEV+AR
Sbjct: 23  MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 82

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETA LL+Q NRLSVRDLA+KFEKG                     HVLLKKLRD+LESL+
Sbjct: 83  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 142

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRVAGRN+DDVE+AIAMVEALAVQLTQREGEL+QEK+EVKKLANFLKQASEDAKKLVDEE
Sbjct: 143 GRVAGRNKDDVEDAIAMVEALAVQLTQREGELLQEKAEVKKLANFLKQASEDAKKLVDEE 202

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFARAEIDNAR+AVQRVEE+L+EHERMSQASGKQD+EQL KEVQEARRIKMLHQPSKVM
Sbjct: 203 RAFARAEIDNARSAVQRVEESLQEHERMSQASGKQDVEQLMKEVQEARRIKMLHQPSKVM 262

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DMEHELQALRAQLAEKTRHYLRLQKE+ RTKKGEENVPH YELEGNE LGSYLQ+
Sbjct: 263 DMEHELQALRAQLAEKTRHYLRLQKEITRTKKGEENVPHLYELEGNETLGSYLQI 317


>Medtr3g045180.1 | Cyclin 4 | HC | chr3:14610141-14617178 | 20130731
          Length = 498

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/295 (76%), Positives = 244/295 (82%), Gaps = 4/295 (1%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIMETKDDPKVVSMKEVVAR 60
           MTRV+  FGDTM       VS+DV FA+ RFP+Y+IG+NN+IM   DDPKV+SMKEVVAR
Sbjct: 1   MTRVTHSFGDTMMMHK-DVVSADVIFASLRFPTYQIGSNNKIM---DDPKVLSMKEVVAR 56

Query: 61  ETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESLR 120
           ETAQLLEQQ RLSVRDLA+KFEKG                     HVLLKKLRD LESL+
Sbjct: 57  ETAQLLEQQKRLSVRDLASKFEKGLAAAAKLSEEAKLREAASLEKHVLLKKLRDGLESLK 116

Query: 121 GRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDEE 180
           GRV GRN+DDV EAI++VEALAVQLT REGEL+QEK+EVKKL NFLKQASEDAKKLV EE
Sbjct: 117 GRVTGRNKDDVHEAISLVEALAVQLTHREGELVQEKAEVKKLTNFLKQASEDAKKLVYEE 176

Query: 181 RAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKVM 240
           RAFAR EIDNARAAVQRVEEAL+EHERMS+ SG QDLEQL KEVQEARRIKMLHQPSKVM
Sbjct: 177 RAFARFEIDNARAAVQRVEEALQEHERMSRTSGNQDLEQLMKEVQEARRIKMLHQPSKVM 236

Query: 241 DMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQM 295
           DMEHELQALR QLAEK+RHYLRLQKELAR KKGEENVPH YELEG E LGSYLQ+
Sbjct: 237 DMEHELQALRTQLAEKSRHYLRLQKELAREKKGEENVPHLYELEGTETLGSYLQI 291


>Medtr7g089090.3 | myosin heavy chain-like protein | HC |
           chr7:34815836-34810879 | 20130731
          Length = 490

 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/304 (55%), Positives = 223/304 (73%), Gaps = 1/304 (0%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIM-ETKDDPKVVSMKEVVA 59
           MT++S +    M  EAVP VS+DV+F ++ FP YK+GA++Q+  ET +D +  S+KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESL 119
           +E + L EQ NR+SVRDLA+KF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 RGRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDE 179
           +GR  GRN++DV  AI+MVEALAV+LTQ EGELIQEK EVKKL NFLKQASEDAKKLV++
Sbjct: 121 KGRFTGRNKEDVANAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180

Query: 180 ERAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKV 239
           E++FA AEI++ARA V R+ EAL+E E++++AS  QD++ L +EVQEARRI++LHQPSKV
Sbjct: 181 EKSFACAEIESARAVVLRIGEALEEQEKVTEASKPQDVDGLVEEVQEARRIRLLHQPSKV 240

Query: 240 MDMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQMSYQI 299
           M ME+EL+ALR Q+ EK+   ++LQKEL  +K  +EN  H Y+L+G+E LGSY+Q+    
Sbjct: 241 MAMEYELRALRDQIQEKSVFSIQLQKELTMSKWDKENKSHSYKLDGSEALGSYMQVKPCT 300

Query: 300 SICP 303
           S  P
Sbjct: 301 SEVP 304


>Medtr7g089090.2 | myosin heavy chain-like protein | HC |
           chr7:34816463-34811080 | 20130731
          Length = 490

 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/304 (55%), Positives = 223/304 (73%), Gaps = 1/304 (0%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIM-ETKDDPKVVSMKEVVA 59
           MT++S +    M  EAVP VS+DV+F ++ FP YK+GA++Q+  ET +D +  S+KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESL 119
           +E + L EQ NR+SVRDLA+KF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 RGRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDE 179
           +GR  GRN++DV  AI+MVEALAV+LTQ EGELIQEK EVKKL NFLKQASEDAKKLV++
Sbjct: 121 KGRFTGRNKEDVANAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180

Query: 180 ERAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKV 239
           E++FA AEI++ARA V R+ EAL+E E++++AS  QD++ L +EVQEARRI++LHQPSKV
Sbjct: 181 EKSFACAEIESARAVVLRIGEALEEQEKVTEASKPQDVDGLVEEVQEARRIRLLHQPSKV 240

Query: 240 MDMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQMSYQI 299
           M ME+EL+ALR Q+ EK+   ++LQKEL  +K  +EN  H Y+L+G+E LGSY+Q+    
Sbjct: 241 MAMEYELRALRDQIQEKSVFSIQLQKELTMSKWDKENKSHSYKLDGSEALGSYMQVKPCT 300

Query: 300 SICP 303
           S  P
Sbjct: 301 SEVP 304


>Medtr7g089090.1 | myosin heavy chain-like protein | HC |
           chr7:34816460-34811349 | 20130731
          Length = 490

 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/304 (55%), Positives = 223/304 (73%), Gaps = 1/304 (0%)

Query: 1   MTRVSRDFGDTMQNEAVPAVSSDVTFATSRFPSYKIGANNQIM-ETKDDPKVVSMKEVVA 59
           MT++S +    M  EAVP VS+DV+F ++ FP YK+GA++Q+  ET +D +  S+KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQNRLSVRDLANKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALESL 119
           +E + L EQ NR+SVRDLA+KF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 RGRVAGRNQDDVEEAIAMVEALAVQLTQREGELIQEKSEVKKLANFLKQASEDAKKLVDE 179
           +GR  GRN++DV  AI+MVEALAV+LTQ EGELIQEK EVKKL NFLKQASEDAKKLV++
Sbjct: 121 KGRFTGRNKEDVANAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQ 180

Query: 180 ERAFARAEIDNARAAVQRVEEALKEHERMSQASGKQDLEQLKKEVQEARRIKMLHQPSKV 239
           E++FA AEI++ARA V R+ EAL+E E++++AS  QD++ L +EVQEARRI++LHQPSKV
Sbjct: 181 EKSFACAEIESARAVVLRIGEALEEQEKVTEASKPQDVDGLVEEVQEARRIRLLHQPSKV 240

Query: 240 MDMEHELQALRAQLAEKTRHYLRLQKELARTKKGEENVPHFYELEGNEILGSYLQMSYQI 299
           M ME+EL+ALR Q+ EK+   ++LQKEL  +K  +EN  H Y+L+G+E LGSY+Q+    
Sbjct: 241 MAMEYELRALRDQIQEKSVFSIQLQKELTMSKWDKENKSHSYKLDGSEALGSYMQVKPCT 300

Query: 300 SICP 303
           S  P
Sbjct: 301 SEVP 304


>Medtr6g079040.1 | myosin heavy chain-like protein, putative | HC |
           chr6:29735252-29736825 | 20130731
          Length = 179

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 92/107 (85%), Gaps = 2/107 (1%)

Query: 106 HVLLKKLRDALESLRGRVAGRNQDDVEEAIAMVEALAVQLTQR-EGELIQEKSEVKKLAN 164
           HVLLKK RDALE L+GR  GRN++DV  +I+MVEALAV+LTQ+ EGELIQEK +VKKL N
Sbjct: 57  HVLLKKQRDALEYLKGRFTGRNKEDVANSISMVEALAVKLTQKNEGELIQEKFKVKKLLN 116

Query: 165 FLKQASEDAKKLVDEERAFARAEIDNARAAVQRVEEALKEHERMSQA 211
           FLKQASEDAKKLV++E++FA AEI+NARA V R  EAL+E E+++QA
Sbjct: 117 FLKQASEDAKKLVNQEQSFACAEIENARAVVLRFGEALEE-EKVTQA 162