Miyakogusa Predicted Gene

Lj2g3v3007310.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007310.2 tr|G7KCR9|G7KCR9_MEDTR Tyrosine-specific
transport protein OS=Medicago truncatula GN=MTR_5g088730
PE,79.28,0,Trp_Tyr_perm,Tryptophan/tyrosine permease; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.39574.2
         (485 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g088730.1 | tyrosine-specific transporter, putative | HC |...   673   0.0  
Medtr6g032995.1 | transmembrane amino acid transporter family pr...    99   1e-20

>Medtr5g088730.1 | tyrosine-specific transporter, putative | HC |
           chr5:38520992-38515762 | 20130731
          Length = 491

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/491 (73%), Positives = 384/491 (78%), Gaps = 18/491 (3%)

Query: 5   SSSPFFQIPTFVIQQRNQQQLLWKVPXXXXXXXXXXXXXXXXXPCHV-RRNLHKCFXXXX 63
           S SPFF IP F+I+ R + QLL  VP                 P  + R+NLHKCF    
Sbjct: 9   SLSPFFHIPNFLIKPR-KTQLLCNVP---PFHQTKLQSTSLYLPSSMNRKNLHKCFSQQE 64

Query: 64  XXXXXXXXXXXXXX---------XRLFSNLNQATLKREPGSLSSAIFLVAGTTVGAGILA 114
                                   RLFSNLNQ T KREPGSLSSAIFLVAGTTVGAGILA
Sbjct: 65  QSQSIQEEQDDEQEQELQHSFQFERLFSNLNQVTFKREPGSLSSAIFLVAGTTVGAGILA 124

Query: 115 IPAVTQEAGFLASAVTCIFCWAFMVVTGLLVAEVNVSTMCELGSGGVSLVSMARRTLGAA 174
           IPAVTQE+GFLAS VTCI CWAFMVVTGLLVAEVNV+TMC+LGSGGVSLVSMARRTLG  
Sbjct: 125 IPAVTQESGFLASTVTCILCWAFMVVTGLLVAEVNVNTMCDLGSGGVSLVSMARRTLGTV 184

Query: 175 GVQISCWSYIFIHYALLVAYIARSSDILTKFLGIPIWESATLFSLIFGGICFFGSQRFIG 234
           GVQISCWSYIFIHYALL+AYIARSSDILT FLGIPIWESATLFSLIFGGIC+FGSQRFIG
Sbjct: 185 GVQISCWSYIFIHYALLIAYIARSSDILTNFLGIPIWESATLFSLIFGGICYFGSQRFIG 244

Query: 235 AVNGVLVFGIISSFAALVAVASGDIHLDALLKANFQAAPMSLPIIALSFVYQNVVPVLCT 294
           A+NGVLV GII  FAALV VASG++HLDALLKANFQAAPMS+PIIALSFVYQNVVPVLCT
Sbjct: 245 AINGVLVVGIIGFFAALVTVASGNLHLDALLKANFQAAPMSIPIIALSFVYQNVVPVLCT 304

Query: 295 NLEGDLLKVRSAIILGTGIPLGLFLIWNGVILGTVTDNVTGLDPIQQLRSTNGTIGPIVE 354
           NLEGDLLKVRSAIILGTGIPL LFL+WNGVILGTV DN  GLDP+QQLRS+NGTIGPIVE
Sbjct: 305 NLEGDLLKVRSAIILGTGIPLILFLVWNGVILGTVGDNPMGLDPLQQLRSSNGTIGPIVE 364

Query: 355 AFSLLAIGTSFIGFVLGLTDFLADLLNLPTGQNKXXXXXXXXXXXXXXXXXXXXXFFKAL 414
            FSLLAI TS+IGFVLGLTDFLADLLNLPTGQN+                     FFKAL
Sbjct: 365 VFSLLAIATSYIGFVLGLTDFLADLLNLPTGQNRPLPYILTLVPPLILSLLDPEIFFKAL 424

Query: 415 DFAGTYGVLVLFGVIPAAMSWSDRXXXXXXXXXXXVKLPELVPGGRITLLLVLGGSGFVI 474
           DFAGTYGVL+LFGVIPAAMSWSDR           VKLPE+VPGGRITLL+VLG SG+VI
Sbjct: 425 DFAGTYGVLLLFGVIPAAMSWSDR----NSNSTSSVKLPEIVPGGRITLLMVLGCSGYVI 480

Query: 475 VSELIENLQHL 485
           +SEL ENLQHL
Sbjct: 481 LSELFENLQHL 491


>Medtr6g032995.1 | transmembrane amino acid transporter family
           protein | HC | chr6:10305757-10308331 | 20130731
          Length = 530

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 19/318 (5%)

Query: 85  NQATLKR----EPGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVTCIFCWAFMVV 140
           N+  +K+    E  S   A+ L+ G  VG G+L +P++T ++G L S +  +  W +++ 
Sbjct: 81  NENFIKKNQCPEKKSFWGAVSLIIGAAVGPGMLGLPSLTIKSGPLPSTIIILISWLYVIS 140

Query: 141 TGLLVAEVNVSTMCELGSGGVSLVSMARRTLGAAGVQISCWSYIFIHYALLVAYIARSSD 200
           + +LVAE+    M       VS  ++A RTLG          Y  + ++LLVA +A    
Sbjct: 141 SIILVAELCFDAMENDNVDEVSFTNLATRTLGQKFGSFVALVYTSLCFSLLVACVAGIGS 200

Query: 201 ILTKFLGIPIWES---ATLFSLIFGGICFFGSQRFIGAVNGVLVFGIISSFAALVAVA-- 255
           IL      P + S    +LF  + G +  F     I   N VL F ++ S   LV +   
Sbjct: 201 ILAPIF--PKFSSLVLHSLFPFVVGTLIVFFPFNTIDFANRVLCFFMLVSITGLVGIGIV 258

Query: 256 ---SGDIHLDALLKANFQAAPMSLPIIALSFVYQNVVPVLCTNLEGDLLKVRSAIILGTG 312
              +  I   A +   F +    +P+  L+  +  + P +C      + + R AI++G  
Sbjct: 259 VARANIISSFASISWKFSSILPIIPVAVLTLGFHVITPFICKIAGNTIDEARKAILIGGV 318

Query: 313 IPLGLFLIWNGVILGTVTDN----VTGLDPIQQLRSTNGTIGPIVEAFSLLAIGTSFIGF 368
           +PL + L WN ++LG V  N      G DPI  L S N +    V+ F+  A+ TS IG+
Sbjct: 319 VPLVMVLSWNLIVLGLVGANKGPDFVG-DPITLLLSVNPSALSAVQGFAFSAMATSLIGY 377

Query: 369 VLGLTDFLADLLNLPTGQ 386
            + L   + D L L +G+
Sbjct: 378 AVSLPKQILDTLELVSGK 395