Miyakogusa Predicted Gene

Lj2g3v3007310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3007310.1 Non Characterized Hit- tr|D1R967|D1R967_9CHLA
Putative uncharacterized protein OS=Parachlamydia
acan,33.33,7e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Trp_Tyr_perm,Tryptophan/tyrosine permease,CUFF.39574.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g088730.1 | tyrosine-specific transporter, putative | HC |...   426   e-119
Medtr6g032995.1 | transmembrane amino acid transporter family pr...    62   8e-10

>Medtr5g088730.1 | tyrosine-specific transporter, putative | HC |
           chr5:38520992-38515762 | 20130731
          Length = 491

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/308 (73%), Positives = 241/308 (78%), Gaps = 14/308 (4%)

Query: 5   SSSPFFQIPTFVIQQRNQQQLLWKVPXXXXXXXXXXXXXXXXXPCHV-RRNLHKCFXXXX 63
           S SPFF IP F+I+ R + QLL  VP                 P  + R+NLHKCF    
Sbjct: 9   SLSPFFHIPNFLIKPR-KTQLLCNVP---PFHQTKLQSTSLYLPSSMNRKNLHKCFSQQE 64

Query: 64  XXXXXXXXXXXXXX---------XRLFSNLNQATLKREPGSLSSAIFLVAGTTVGAGILA 114
                                   RLFSNLNQ T KREPGSLSSAIFLVAGTTVGAGILA
Sbjct: 65  QSQSIQEEQDDEQEQELQHSFQFERLFSNLNQVTFKREPGSLSSAIFLVAGTTVGAGILA 124

Query: 115 IPAVTQEAGFLASAVTCIFCWAFMVVTGLLVAEVNVSTMCELGSGGVSLVSMARRTLGAA 174
           IPAVTQE+GFLAS VTCI CWAFMVVTGLLVAEVNV+TMC+LGSGGVSLVSMARRTLG  
Sbjct: 125 IPAVTQESGFLASTVTCILCWAFMVVTGLLVAEVNVNTMCDLGSGGVSLVSMARRTLGTV 184

Query: 175 GVQISCWSYIFIHYALLVAYIARSSDILTKFLGIPIWESATLFSLIFGGICFFGSQRFIG 234
           GVQISCWSYIFIHYALL+AYIARSSDILT FLGIPIWESATLFSLIFGGIC+FGSQRFIG
Sbjct: 185 GVQISCWSYIFIHYALLIAYIARSSDILTNFLGIPIWESATLFSLIFGGICYFGSQRFIG 244

Query: 235 AVNGVLVFGIISSFAALVAVASGDIHLDALLKANFQAAPMSLPIIALSFVYQNVVPVLCT 294
           A+NGVLV GII  FAALV VASG++HLDALLKANFQAAPMS+PIIALSFVYQNVVPVLCT
Sbjct: 245 AINGVLVVGIIGFFAALVTVASGNLHLDALLKANFQAAPMSIPIIALSFVYQNVVPVLCT 304

Query: 295 NLEGDLLK 302
           NLEGDLLK
Sbjct: 305 NLEGDLLK 312


>Medtr6g032995.1 | transmembrane amino acid transporter family
           protein | HC | chr6:10305757-10308331 | 20130731
          Length = 530

 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 15/232 (6%)

Query: 85  NQATLKR----EPGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVTCIFCWAFMVV 140
           N+  +K+    E  S   A+ L+ G  VG G+L +P++T ++G L S +  +  W +++ 
Sbjct: 81  NENFIKKNQCPEKKSFWGAVSLIIGAAVGPGMLGLPSLTIKSGPLPSTIIILISWLYVIS 140

Query: 141 TGLLVAEVNVSTMCELGSGGVSLVSMARRTLGAAGVQISCWSYIFIHYALLVAYIARSSD 200
           + +LVAE+    M       VS  ++A RTLG          Y  + ++LLVA +A    
Sbjct: 141 SIILVAELCFDAMENDNVDEVSFTNLATRTLGQKFGSFVALVYTSLCFSLLVACVAGIGS 200

Query: 201 ILTKFLGIPIWES---ATLFSLIFGGICFFGSQRFIGAVNGVLVFGIISSFAALVAVA-- 255
           IL      P + S    +LF  + G +  F     I   N VL F ++ S   LV +   
Sbjct: 201 ILAPIF--PKFSSLVLHSLFPFVVGTLIVFFPFNTIDFANRVLCFFMLVSITGLVGIGIV 258

Query: 256 ---SGDIHLDALLKANFQAAPMSLPIIALSFVYQNVVPVLCTNLEGDLLKEC 304
              +  I   A +   F +    +P+  L+  +  + P +C  + G+ + E 
Sbjct: 259 VARANIISSFASISWKFSSILPIIPVAVLTLGFHVITPFIC-KIAGNTIDEA 309