Miyakogusa Predicted Gene

Lj2g3v2997270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2997270.1 Non Characterized Hit- tr|I1LWB5|I1LWB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20705
PE,72.76,0,RINT1_TIP20,RINT-1/TIP-1; RINT1_TIP1,RINT-1/TIP-1;
RAD50-INTERACTING PROTEIN 1 (PROTEIN RINT-1),NULL,CUFF.39572.1
         (824 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g040540.1 | RINT-1/TIP-1 family protein | HC | chr3:142790...  1150   0.0  
Medtr3g040540.2 | RINT-1/TIP-1 family protein | HC | chr3:142790...   944   0.0  
Medtr7g059230.1 | RINT-1/TIP-1 family protein | HC | chr7:214268...   468   e-132
Medtr1g023390.1 | hypothetical protein | LC | chr1:7485073-74848...    52   3e-06

>Medtr3g040540.1 | RINT-1/TIP-1 family protein | HC |
           chr3:14279045-14273756 | 20130731
          Length = 831

 Score = 1150 bits (2975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/811 (70%), Positives = 651/811 (80%), Gaps = 10/811 (1%)

Query: 21  TPQHR-----AFLDQHFKTRQDLSLESTHRVLSSSLTQQCSHLESHLLNRLTKRTVSWIS 75
           T QH       FLDQ+ KT+QDL +EST  ++SSSLT+QCS ++S+LLNR+TKRTVSWIS
Sbjct: 21  TKQHNIDEIIGFLDQNLKTKQDLFIESTQFLISSSLTKQCSQIQSYLLNRITKRTVSWIS 80

Query: 76  RSFNATSSFHQLTLSLQNLSLRTSPHGVGSKSFRWVLNEELPRLAKEMNRIDSLRSYLET 135
           RSF A SSFHQLTLSLQNLSL TSPHGVGSK FRWVL++ELPRLAKE+NR++S+RSYLET
Sbjct: 81  RSFKANSSFHQLTLSLQNLSLLTSPHGVGSKRFRWVLSDELPRLAKELNRVESVRSYLET 140

Query: 136 ALQLEALVGDLEDAALFVMACLTGXXXXXXXXXXXXXEE--RKHDNLLQAIKAMNGIEEV 193
           A+QLEA VGDLEDAAL+VMAC TG             ++  RKHD LLQAIK+MN IE+V
Sbjct: 141 AVQLEASVGDLEDAALYVMACHTGNMFSSKLSVSSISDDNARKHDKLLQAIKSMNDIEQV 200

Query: 194 LITVVKLHPRWHCLLRSVDVRADKILAALRPQVFADHRALLVSLGWPPKLLSLKNGCEQI 253
           L+ +VK H +W CLLRSVDVR DKILAALRP+VFADHRALL SLGWPPKLL  +NG EQI
Sbjct: 201 LVVIVKFHSQWLCLLRSVDVRVDKILAALRPKVFADHRALLASLGWPPKLLQSENGSEQI 260

Query: 254 AGLPNPLVLMHEDKRRNYSRSFIALCALQHLQNRREERQLNNLTKREKHNTQLWAISELV 313
             LPNPLVLM EDKRRNYS+SFIALCALQHLQ++REERQ NNL K EK N +LW+I ELV
Sbjct: 261 TDLPNPLVLMLEDKRRNYSQSFIALCALQHLQDKREERQNNNLKKSEKRNLRLWSIDELV 320

Query: 314 SPMASRMEYHFAKWTEQPEYMFALAYKVTSDFIVGVDDVLQPLIDKARLISCSAKEAWVS 373
           SP++SRMEYHF KWTEQPEYMFAL YKVT  FI GVDDVLQP+IDKA LISCSAKEAWV 
Sbjct: 321 SPISSRMEYHFGKWTEQPEYMFALTYKVTRGFITGVDDVLQPIIDKAGLISCSAKEAWVY 380

Query: 374 AMVQMLSGFLEKKVFPLLAERYQVKHLKPDVLSSWLHLIDLIIAFDKKMQSLVNLDTCFL 433
           AMVQ+LSGFLEKKV  LLAERY  KHLK DVLSSWLHL+DLIIAFDKKMQ LVNLDTCFL
Sbjct: 381 AMVQVLSGFLEKKVIALLAERYNAKHLKSDVLSSWLHLVDLIIAFDKKMQCLVNLDTCFL 440

Query: 434 PXXXXXXXXXXXXXVLSIFCDRQDWLKIWAKIEFKNAWKKLNTELKEERAWVICSNSKPG 493
                         VLSIFCDR DWLKIWAK+EFKNAW KLNTELKEE+ WV+    K G
Sbjct: 441 VESGNFEGPSRGMSVLSIFCDRHDWLKIWAKLEFKNAWTKLNTELKEEKMWVVSGTCKSG 500

Query: 494 LGTDQEYVFPNIEDHKALPIAKSFLKIIWEIIERCQTMPSILLRAQFIRSAAGRLIWYFM 553
           + TDQE++    ED KA PIA  FLK+IWE+IERCQTMPS+L RAQFIRSAAGR IWYF 
Sbjct: 501 IDTDQEHLLSTTEDLKAPPIADFFLKVIWEMIERCQTMPSLLPRAQFIRSAAGRFIWYFF 560

Query: 554 KILLFRFKGNELCPDISDGVSVIKACGFINTARYMWVKLQEWSDAVDFLEMKIAENDSTK 613
           KILL RFK  EL P   D  S+++ACG IN +RY+ +KLQEWSDAVDFLEMKIAENDS+K
Sbjct: 561 KILLLRFKATELSPHNFDDGSIVRACGLINASRYISIKLQEWSDAVDFLEMKIAENDSSK 620

Query: 614 LIQDDIMDSGCFFYEEIKSLSEMETNWLMEIMSIVLREFETLSWDYIQNKENFEEGQDDT 673
              DD MDS CFF EEI+SLSEMETNWL+EI++++LR+FE LSW+Y+QNK +FEE QD +
Sbjct: 621 KKLDDRMDSDCFFDEEIRSLSEMETNWLVEIIAVILRQFEILSWEYVQNKYSFEEDQDYS 680

Query: 674 NLVAVREDVDLAVSNDFIEALDNLKSWLRIVKINLNTKDFIDLWRSIAEGLDHYISCSIV 733
           NL A R+ +DL VSNDF+EALD LKSWL IVK NLN KDF+DLWRSIAEGLDHYIS SI 
Sbjct: 681 NLGASRDSIDLVVSNDFVEALDALKSWLNIVKKNLNKKDFLDLWRSIAEGLDHYISSSIS 740

Query: 734 KNEIRFTKMGINQFEVDMHAMIFIFQPFCARPQAFFPCINXXXXXXXXXXXXX---XXFL 790
            +EIRF+K+GINQF+ DM A+IFIFQP+CARP AFFPCIN                   L
Sbjct: 741 TSEIRFSKIGINQFDADMQALIFIFQPYCARPHAFFPCINEILKLLKLKEEEANIIKGLL 800

Query: 791 SNDENGSKCLHLYGISHLSVDQVLQVLTYRN 821
           S++E+G KCLHL GI HLSV+QVLQVL YRN
Sbjct: 801 SSEESGRKCLHLRGIRHLSVNQVLQVLRYRN 831


>Medtr3g040540.2 | RINT-1/TIP-1 family protein | HC |
           chr3:14279045-14273164 | 20130731
          Length = 661

 Score =  944 bits (2440), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/650 (71%), Positives = 524/650 (80%), Gaps = 3/650 (0%)

Query: 175 RKHDNLLQAIKAMNGIEEVLITVVKLHPRWHCLLRSVDVRADKILAALRPQVFADHRALL 234
           RKHD LLQAIK+MN IE+VL+ +VK H +W CLLRSVDVR DKILAALRP+VFADHRALL
Sbjct: 12  RKHDKLLQAIKSMNDIEQVLVVIVKFHSQWLCLLRSVDVRVDKILAALRPKVFADHRALL 71

Query: 235 VSLGWPPKLLSLKNGCEQIAGLPNPLVLMHEDKRRNYSRSFIALCALQHLQNRREERQLN 294
            SLGWPPKLL  +NG EQI  LPNPLVLM EDKRRNYS+SFIALCALQHLQ++REERQ N
Sbjct: 72  ASLGWPPKLLQSENGSEQITDLPNPLVLMLEDKRRNYSQSFIALCALQHLQDKREERQNN 131

Query: 295 NLTKREKHNTQLWAISELVSPMASRMEYHFAKWTEQPEYMFALAYKVTSDFIVGVDDVLQ 354
           NL K EK N +LW+I ELVSP++SRMEYHF KWTEQPEYMFAL YKVT  FI GVDDVLQ
Sbjct: 132 NLKKSEKRNLRLWSIDELVSPISSRMEYHFGKWTEQPEYMFALTYKVTRGFITGVDDVLQ 191

Query: 355 PLIDKARLISCSAKEAWVSAMVQMLSGFLEKKVFPLLAERYQVKHLKPDVLSSWLHLIDL 414
           P+IDKA LISCSAKEAWV AMVQ+LSGFLEKKV  LLAERY  KHLK DVLSSWLHL+DL
Sbjct: 192 PIIDKAGLISCSAKEAWVYAMVQVLSGFLEKKVIALLAERYNAKHLKSDVLSSWLHLVDL 251

Query: 415 IIAFDKKMQSLVNLDTCFLPXXXXXXXXXXXXXVLSIFCDRQDWLKIWAKIEFKNAWKKL 474
           IIAFDKKMQ LVNLDTCFL              VLSIFCDR DWLKIWAK+EFKNAW KL
Sbjct: 252 IIAFDKKMQCLVNLDTCFLVESGNFEGPSRGMSVLSIFCDRHDWLKIWAKLEFKNAWTKL 311

Query: 475 NTELKEERAWVICSNSKPGLGTDQEYVFPNIEDHKALPIAKSFLKIIWEIIERCQTMPSI 534
           NTELKEE+ WV+    K G+ TDQE++    ED KA PIA  FLK+IWE+IERCQTMPS+
Sbjct: 312 NTELKEEKMWVVSGTCKSGIDTDQEHLLSTTEDLKAPPIADFFLKVIWEMIERCQTMPSL 371

Query: 535 LLRAQFIRSAAGRLIWYFMKILLFRFKGNELCPDISDGVSVIKACGFINTARYMWVKLQE 594
           L RAQFIRSAAGR IWYF KILL RFK  EL P   D  S+++ACG IN +RY+ +KLQE
Sbjct: 372 LPRAQFIRSAAGRFIWYFFKILLLRFKATELSPHNFDDGSIVRACGLINASRYISIKLQE 431

Query: 595 WSDAVDFLEMKIAENDSTKLIQDDIMDSGCFFYEEIKSLSEMETNWLMEIMSIVLREFET 654
           WSDAVDFLEMKIAENDS+K   DD MDS CFF EEI+SLSEMETNWL+EI++++LR+FE 
Sbjct: 432 WSDAVDFLEMKIAENDSSKKKLDDRMDSDCFFDEEIRSLSEMETNWLVEIIAVILRQFEI 491

Query: 655 LSWDYIQNKENFEEGQDDTNLVAVREDVDLAVSNDFIEALDNLKSWLRIVKINLNTKDFI 714
           LSW+Y+QNK +FEE QD +NL A R+ +DL VSNDF+EALD LKSWL IVK NLN KDF+
Sbjct: 492 LSWEYVQNKYSFEEDQDYSNLGASRDSIDLVVSNDFVEALDALKSWLNIVKKNLNKKDFL 551

Query: 715 DLWRSIAEGLDHYISCSIVKNEIRFTKMGINQFEVDMHAMIFIFQPFCARPQAFFPCINX 774
           DLWRSIAEGLDHYIS SI  +EIRF+K+GINQF+ DM A+IFIFQP+CARP AFFPCIN 
Sbjct: 552 DLWRSIAEGLDHYISSSISTSEIRFSKIGINQFDADMQALIFIFQPYCARPHAFFPCINE 611

Query: 775 XXXXXXXXXXXX---XXFLSNDENGSKCLHLYGISHLSVDQVLQVLTYRN 821
                             LS++E+G KCLHL GI HLSV+QVLQVL YRN
Sbjct: 612 ILKLLKLKEEEANIIKGLLSSEESGRKCLHLRGIRHLSVNQVLQVLRYRN 661


>Medtr7g059230.1 | RINT-1/TIP-1 family protein | HC |
           chr7:21426843-21422844 | 20130731
          Length = 801

 Score =  468 bits (1204), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/821 (34%), Positives = 435/821 (52%), Gaps = 68/821 (8%)

Query: 26  AFLDQHFKTRQDLSLESTHRVLSSSLTQQCSHLESHLLNRLTKRTVSWISRSFNATSSFH 85
            FLD +F T   L+ ES + V  + L  QCS L+   L+ LT+R  + +++  + +   H
Sbjct: 19  TFLDHNFHTATVLT-ESPNFV--AELQTQCSELD-RALDDLTRRLGAGLAKYASFSGEIH 74

Query: 86  QL----TLSLQNLSL-----------RTSPHGVGSKSFRWVLNEELPRLAKEMNRIDSLR 130
            L       L  +S            R    G G K FR    EEL  LAKE+ R++++R
Sbjct: 75  SLFDGVKFKLNEISATCSSSIVPDGGRCEGDGKGEKGFR----EELATLAKEVARLETVR 130

Query: 131 SYLETALQLEALVGDLEDAALFVMACLTGXXXXXXXXXXXXXEERKHDNLLQAIKAMNGI 190
            Y ETAL+L+ LVGD+EDA  + M+                 +E   D  L AIK +   
Sbjct: 131 VYAETALKLDTLVGDIEDAVSYTMS--------NKNIRKHSSDENSGDMRLFAIKKLKMT 182

Query: 191 EEVLITVVKLHPRWHCLLRSVDVRADKILAALRPQVFADHRALLVSLGWPPKLLSLKNGC 250
           EE L ++  +HP+W  L+ +VD R D+ LA LRPQ  ADHRALL SLGWPP L +L +  
Sbjct: 183 EETLTSITNIHPQWRNLVSAVDHRVDRALAILRPQAIADHRALLSSLGWPPPLSALTSSH 242

Query: 251 EQIAGLPNPLVLMHEDKRRNYSRSFIALCALQHLQNRREERQLNNLTKREKHNTQLWAIS 310
              A + NPL  MH D +  YS +F+ALC LQ LQ +R+ RQL    +       LWAI 
Sbjct: 243 SD-ARIANPLQSMHADHKLRYSENFLALCNLQELQRKRKSRQLVGHDREIALRQPLWAIE 301

Query: 311 ELVSPMASRMEYHFAKWTEQPEYMFALAYKVTSDFIVGVDDVLQPLIDKARLISCSAKEA 370
           ELV+P++   E HF+KW ++PE++F L YK+T D++  VD++LQPL+D+A+++  S +E 
Sbjct: 302 ELVNPLSLASEKHFSKWVDKPEFIFTLVYKITRDYVDSVDEMLQPLVDEAKVVGYSCREE 361

Query: 371 WVSAMVQMLSGFLEKKVFPLLA---ERYQVKHLKPDVLSSWLHLIDLIIAFDKKMQSLVN 427
           W+SAMV  LS +L K++FP      E   +  ++     SWLHLIDL+IAFDKK+ SLV 
Sbjct: 362 WISAMVTSLSTYLAKEIFPSYITQLEEESITGIQSSSRISWLHLIDLMIAFDKKIMSLVE 421

Query: 428 LDTCFLPXXXXXXXXXXXXXVLSIFCDRQDWLKIWAKIEFKNAWKKLNTELKEERAWVIC 487
                L               LS+FCDR DWL +WA+IE  +A  KL  +++ E  W   
Sbjct: 422 NSGVLLSLDDDILQRISS---LSVFCDRPDWLDLWAEIELGDALDKLKPDIENENNWRKK 478

Query: 488 SNSKPGLGTDQEYVFPNIEDHKALPIAKSFLKIIWEIIERCQTMPSILLRAQFIRSAAGR 547
             S          +  NI+DHK+  ++ +F++ +  ++ERC+++P++ LR++F+R     
Sbjct: 479 IESVA--------LSSNIDDHKSPLVSSAFVRHLASVVERCRSLPNVTLRSKFLRLVGVP 530

Query: 548 LIWYFMKILLFRFKGNELCPDISDGVSVIKACGFINTARYMWVKLQEWSDAVDFLEMKIA 607
           +I  F   +L R +  E    ++D  ++ K    IN A Y    L EWS+ V FLEM + 
Sbjct: 531 IIRKFSDSILVRCQEAEGLTALTDNDALTKVAISINAAHYFESVLNEWSEDVFFLEMGVD 590

Query: 608 ENDSTKLIQDDIMDSG--------CFFYEEIKSLSEMETNWLMEIMSIVLREFETLSWDY 659
           E D  +L  +   DS           F +EIK L E  T W+ +I  ++LR F+  S +Y
Sbjct: 591 EEDKVELPSNSNRDSEGWPESSNRVIFDDEIKKLEEFRTEWVEKIAVVILRGFDARSREY 650

Query: 660 IQNKENFEEGQDDTNLVAVREDVDLAVSNDFIEALDNLKSWLRIVKINLNTKDFIDLWRS 719
           ++NK+ +++ ++              VS   IEALD L+  + +V+  LN++DF+ +WRS
Sbjct: 651 LKNKKQWQKSEE-----------GWTVSKTLIEALDYLQGKMAVVEEGLNSRDFVGVWRS 699

Query: 720 IAEGLDHYISCSIVKNEIRFTKMGINQFEVDMHAMIFIFQPFCARPQAFFPCINXXXXXX 779
           +A G+D  I   I+ +  +F   G+ +F  D+  +  +F  +C RP+ FFP         
Sbjct: 700 LAAGIDRLIFNGILLSNAKFHNSGVERFGSDLDVLFGVFGSWCLRPEGFFPNTIEGLKLL 759

Query: 780 XXXXXXXXXFLSNDENGSKCLHLYGISHLSVDQVLQVLTYR 820
                     ++    G + L   GI HLSV +  ++L  R
Sbjct: 760 KMDEKRVQECMT---GGKRRLKENGIRHLSVSEAEKILKNR 797


>Medtr1g023390.1 | hypothetical protein | LC | chr1:7485073-7484897
           | 20130731
          Length = 58

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)

Query: 375 MVQMLSGFLEK-KVFPLLAERYQVKHLKPDVLSSWLHLIDLIIAFDKKMQS 424
           MVQ++S FLE+  V    +E Y+  HLKP+V+SSW  LI+L  AFDKKMQS
Sbjct: 1   MVQIISVFLEETNVLYWFSEIYKAGHLKPNVISSWPQLIEL-FAFDKKMQS 50