Miyakogusa Predicted Gene
- Lj2g3v2986050.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2986050.2 Non Characterized Hit- tr|I1JIR6|I1JIR6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9030
PE=,72.91,0,La,RNA-binding protein Lupus La; Domain in the RNA-binding
Lupus La protein;,RNA-binding protein Lup,CUFF.39560.2
(926 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain pro... 1093 0.0
Medtr5g488160.1 | MYB-like DNA-binding domain, shaqkyf class pro... 135 3e-31
Medtr5g088060.1 | MYB-like DNA-binding domain, shaqkyf class pro... 135 3e-31
Medtr5g088005.1 | LA RNA-binding protein | HC | chr5:38164646-38... 120 7e-27
Medtr5g022790.3 | ATP synthase, A subunit | HC | chr5:9031583-90... 112 2e-24
Medtr5g022790.2 | ATP synthase, A subunit | HC | chr5:9031583-90... 111 3e-24
Medtr5g022790.1 | ATP synthase, A subunit | HC | chr5:9032818-90... 111 3e-24
Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain pro... 107 7e-23
Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain pro... 103 6e-22
Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain pro... 102 1e-21
Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain pro... 100 6e-21
Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain pro... 87 5e-17
Medtr5g027770.1 | hypothetical protein | LC | chr5:11587777-1158... 84 7e-16
Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain pro... 79 2e-14
Medtr3g114450.3 | LA-related protein 6 LA RNA-binding domain pro... 65 3e-10
Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain pro... 58 4e-08
Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain pro... 58 4e-08
Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain pro... 56 2e-07
>Medtr5g088200.1 | LA-related protein 2 LA RNA-binding domain
protein | HC | chr5:38241687-38234903 | 20130731
Length = 911
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/942 (62%), Positives = 662/942 (70%), Gaps = 47/942 (4%)
Query: 1 MVSAENEIGGEDHKEFSAPKSPWKTPAVVDGRGADVPVMM-GTESWPALSDAQXXXXXXX 59
MV A+NE+ ED KE +APKSPWK P+V DG+ DVPV++ GT+SWPALSDAQ
Sbjct: 1 MVIADNEVV-EDQKEMNAPKSPWKRPSV-DGKSVDVPVLVVGTKSWPALSDAQTPKPKNH 58
Query: 60 XXXXXXXXXXXXXXXXGAGVIAARPPSVQQKSNGPGNLNPSHKGPPSRYQKPGPKRNGN- 118
G +A R PSVQ KSNG GN NP +K P RYQKPGPKRN N
Sbjct: 59 VENVSAKGEDVAVSVPSVGQVAPRAPSVQ-KSNGSGNFNPMNKMPTPRYQKPGPKRNSNT 117
Query: 119 -GAP--PFXXXXXXXXXXXXXXXXXXXXXXHIAVPGYAXXXXXXXXXSVENPLAKPGS-Q 174
GAP P HIA+P YA + ENPL KP S
Sbjct: 118 NGAPHFPVATMPYHQQPPVAPYFHPMAPPPHIAIPAYAFPPGSGPYPNGENPLVKPVSPA 177
Query: 175 APGQAFTPPAHAVEGKNVKPPVQGDPNGYAVNFSNGRPNVQEQGDHLNPAWHHQRP--SR 232
A GQ FT PAHAV+ K+V+PPVQGDPN YAVN+ NGRPN+QEQGDH+N WHHQRP +R
Sbjct: 178 AAGQGFTSPAHAVDAKHVQPPVQGDPNAYAVNYPNGRPNIQEQGDHVNHGWHHQRPFPAR 237
Query: 233 GNMSMQHGLXXXXXXXXXXXXXXXXYMVGPSFXXXXXXXXXXXXXXXSIRGPHPRHFVSY 292
NM MQHG+ YMVGPSF SIRGP PRHF Y
Sbjct: 238 ANMPMQHGMGPRPFIRPPFYGPPPGYMVGPSFPGHAPIWCVPMPPPGSIRGPPPRHFAPY 297
Query: 293 P-VNPTPQPMPPETLALRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKR 351
P VN PQ PET +LR SI+KQIEYYFSDENL NDRYLI LMD+QGWVPISTVA FKR
Sbjct: 298 PPVNSAPQSPTPETQSLRASILKQIEYYFSDENLHNDRYLIGLMDDQGWVPISTVADFKR 357
Query: 352 VKRMSSDIAFIIDALQSSNTVEVQGDKIRKSNDWSKWIQVSSGNSGSSTAQIQQSRLVKG 411
VKRMS+DI FI+D LQ+S+ VEVQ DKIRK N+WSKWIQ SSGNSGSS AQ+QQ + V+
Sbjct: 358 VKRMSTDIPFIVDVLQNSDNVEVQDDKIRKRNNWSKWIQTSSGNSGSSVAQVQQDQHVES 417
Query: 412 ADNS-QNIDALGDKTMESSNEDHRDAAHNSVSMEHNQSNKDASQISHLKREQDTESHHSN 470
NS QN D + DKT ESS D+AH+S S E NQSNKD ++S + ++QDT SH S
Sbjct: 418 TANSCQNSDTVVDKTKESSEATLNDSAHDSTSTEQNQSNKDTFEVSDVNQKQDTNSHPSK 477
Query: 471 DVSHAVTGESVTFSSFDRTNNSCHSQETEPKIFDYDETENMDVLADMEIGDHSNDFGNTF 530
++SHAV ++ T R N C QET+ KI DY+ET NMDV AD DFGNTF
Sbjct: 478 NISHAVMNKNAT----TRINFYCRPQETKTKIVDYNETGNMDVSAD--------DFGNTF 525
Query: 531 MLDEEIELEQKMLKKSEVSSPTRIDDEDDEMAVIEQDVQRLVIVTQNGDPKQGSGDGGKE 590
+LDEEIELEQKM KK+E+SS RI+DEDDEMAVIEQDVQRLVIVTQNGDPK+ + G KE
Sbjct: 526 LLDEEIELEQKMPKKTELSSTGRIEDEDDEMAVIEQDVQRLVIVTQNGDPKKDTS-GSKE 584
Query: 591 SKSISNELASAINDGLYFYEQELKH-RRSNRRKNNCDNRGRNLKSPSQTSGVLNMKVGEN 649
SK ISNELASAINDGLYFYEQEL+H RRSNRRK + G N+K GEN
Sbjct: 585 SKPISNELASAINDGLYFYEQELRHNRRSNRRK-------------TLLQGASNIKTGEN 631
Query: 650 TGGSSVPEEVGSNNSRRKQKVFP--KQQSSIKQRFFSSNFRNHGTGRNSHGVISESPPSN 707
GS EE GSNN RRKQK F KQQSS+KQRFFS+NFRNHGTGRNSHGVISESPPSN
Sbjct: 632 AVGSL--EEPGSNNPRRKQKGFHNHKQQSSLKQRFFSNNFRNHGTGRNSHGVISESPPSN 689
Query: 708 SVGFFFASTPPENHGLKPSIXXXXXXXXXXXXXXXXXXTPKSFPPFQHPSHQLLEENGFK 767
SVGFFF+STPPEN L S PKSFPPFQHPSHQLLEENGFK
Sbjct: 690 SVGFFFSSTPPENQSLMLSKLGSSPHGGVSGSSPPVGSMPKSFPPFQHPSHQLLEENGFK 749
Query: 768 QQKYLKYQKRCLNERKKLGVGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKLAMEDAAAN 827
QQKYLKY K+CLN+RKKLG+GCSEEMNTLYRFW YFLRD+FVPSMY+EFKKLAMEDAAAN
Sbjct: 750 QQKYLKYHKKCLNDRKKLGIGCSEEMNTLYRFWCYFLRDMFVPSMYDEFKKLAMEDAAAN 809
Query: 828 YHYGMECLFRFFSYGLEKEFRDDLYKDFEQLSLDFYHKGNLYGLEKYWAFHHYRKLRNQK 887
Y+YGMECLFRF+SYGLEKEFRDDLYKDFEQL+LD+YHKGNLYGLEKYWAFHHYRK+RNQK
Sbjct: 810 YYYGMECLFRFYSYGLEKEFRDDLYKDFEQLTLDYYHKGNLYGLEKYWAFHHYRKMRNQK 869
Query: 888 EPLHKHPELEKLLREEYRSLEDFR---AKEKNLVKEDTKKVE 926
EPL KHPEL++LL EEYRSLEDFR K+DT KVE
Sbjct: 870 EPLKKHPELDRLLNEEYRSLEDFRAKEKNAAKAAKDDTNKVE 911
>Medtr5g488160.1 | MYB-like DNA-binding domain, shaqkyf class
protein | LC | chr5:38202522-38200002 | 20130731
Length = 461
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 110/216 (50%), Gaps = 47/216 (21%)
Query: 29 VDGRGADVPVMM-GTESWPALSDAQXXXXXXXXXXXXXXXXXXXXXXXGAGVIAARPPSV 87
VD + DVPV++ GT+S PALSDAQ G +A R PSV
Sbjct: 13 VDEKSVDVPVLVVGTKSSPALSDAQTPKPINHVEKLSVP---------SVGQVAPRAPSV 63
Query: 88 QQKSNGPGNLNPSHKGPPSRYQKPGPKRN--GNGAPPFXXXXXXXXXXXXXXXXXXXXXX 145
Q KSNG GN N +K P R +KPGPKRN NG P F
Sbjct: 64 Q-KSNGSGNFNLKNKMPSPRSRKPGPKRNRNTNGTPHFP--------------------- 101
Query: 146 HIAVPGYAXXXXXXXXXSVENPLAKPGSQAPGQAFTPPAHAVEGKNVKPPVQGDPNGYAV 205
+A Y ENP A GQ FTPPAHA++ K+V+PPVQ D N YAV
Sbjct: 102 -VATMPYPNG---------ENP-KHVSPAAAGQGFTPPAHAIDAKHVQPPVQEDLNAYAV 150
Query: 206 NFSNGRPNVQEQGDHLNPAWHHQR--PSRGNMSMQH 239
N+ NGRPN+QEQGDH+N HHQR P++ NM MQH
Sbjct: 151 NYPNGRPNIQEQGDHVNHGRHHQRPFPAKANMPMQH 186
>Medtr5g088060.1 | MYB-like DNA-binding domain, shaqkyf class
protein | LC | chr5:38175298-38172778 | 20130731
Length = 461
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 110/216 (50%), Gaps = 47/216 (21%)
Query: 29 VDGRGADVPVMM-GTESWPALSDAQXXXXXXXXXXXXXXXXXXXXXXXGAGVIAARPPSV 87
VD + DVPV++ GT+S PALSDAQ G +A R PSV
Sbjct: 13 VDEKSVDVPVLVVGTKSSPALSDAQTPKPINHVEKLSVP---------SVGQVAPRAPSV 63
Query: 88 QQKSNGPGNLNPSHKGPPSRYQKPGPKRN--GNGAPPFXXXXXXXXXXXXXXXXXXXXXX 145
Q KSNG GN N +K P R +KPGPKRN NG P F
Sbjct: 64 Q-KSNGSGNFNLKNKMPSPRSRKPGPKRNRNTNGTPHFP--------------------- 101
Query: 146 HIAVPGYAXXXXXXXXXSVENPLAKPGSQAPGQAFTPPAHAVEGKNVKPPVQGDPNGYAV 205
+A Y ENP A GQ FTPPAHA++ K+V+PPVQ D N YAV
Sbjct: 102 -VATMPYPNG---------ENP-KHVSPAAAGQGFTPPAHAIDAKHVQPPVQEDLNAYAV 150
Query: 206 NFSNGRPNVQEQGDHLNPAWHHQR--PSRGNMSMQH 239
N+ NGRPN+QEQGDH+N HHQR P++ NM MQH
Sbjct: 151 NYPNGRPNIQEQGDHVNHGRHHQRPFPAKANMPMQH 186
>Medtr5g088005.1 | LA RNA-binding protein | HC |
chr5:38164646-38165512 | 20130731
Length = 164
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 112/226 (49%), Gaps = 69/226 (30%)
Query: 1 MVSAENEIGGEDHKEFSAPKSPWKTPAVVDGRGADVPVMM-GTESWPALSDAQXXXXXXX 59
MV A+NEI SAPKS K P+V + + DVPV++ GT+SWPALS AQ
Sbjct: 1 MVIADNEI--------SAPKSSRKRPSV-EEKSVDVPVLVVGTKSWPALSHAQTPKPMNH 51
Query: 60 XXXXXXXXXXXXXXXXGAGVIAARPPSVQQKSNGPGNLNPSHKGPPSRYQKPGPKRNGN- 118
QKSNG GN NP +K P RY+KPGPKRN N
Sbjct: 52 VENVSV-----------------------QKSNGSGNFNPKNKMPSPRYRKPGPKRNSNT 88
Query: 119 -GAPPFXXXXXXXXXXXXXXXXXXXXXXHIAVPGYAXXXXXXXXXSVENPLAKPGS-QAP 176
G P F +A Y ENP KP S A
Sbjct: 89 NGTPHFP----------------------VATMPYPNG---------ENP--KPVSLAAA 115
Query: 177 GQAFTPPAHAVEGKNVKPPVQGDPNGYAVNFSNGRPNVQEQGDHLN 222
GQ FTPPAH ++ K+V+PPVQGDPN YAVN+ NGRPN+Q++GDH+N
Sbjct: 116 GQGFTPPAHVIDAKHVQPPVQGDPNAYAVNYPNGRPNIQKEGDHVN 161
>Medtr5g022790.3 | ATP synthase, A subunit | HC |
chr5:9031583-9028239 | 20130731
Length = 387
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 64/85 (75%)
Query: 308 LRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDALQ 367
L + I+ QI+YYFS+ENL D +L MD QGWVPI+ +AGFK+V ++ +I IIDA++
Sbjct: 221 LHSKIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIR 280
Query: 368 SSNTVEVQGDKIRKSNDWSKWIQVS 392
+S+ VEVQGDKIR+ NDW KWI S
Sbjct: 281 TSSVVEVQGDKIRRQNDWEKWIMPS 305
>Medtr5g022790.2 | ATP synthase, A subunit | HC |
chr5:9031583-9026232 | 20130731
Length = 535
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 64/85 (75%)
Query: 308 LRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDALQ 367
L + I+ QI+YYFS+ENL D +L MD QGWVPI+ +AGFK+V ++ +I IIDA++
Sbjct: 221 LHSKIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKKVMDLTDNIQLIIDAIR 280
Query: 368 SSNTVEVQGDKIRKSNDWSKWIQVS 392
+S+ VEVQGDKIR+ NDW KWI S
Sbjct: 281 TSSVVEVQGDKIRRQNDWEKWIMPS 305
>Medtr5g022790.1 | ATP synthase, A subunit | HC |
chr5:9032818-9026232 | 20130731
Length = 670
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 8/101 (7%)
Query: 292 YPVNPTPQPMPPETLALRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKR 351
Y P PQ L + I+ QI+YYFS+ENL D +L MD QGWVPI+ +AGFK+
Sbjct: 348 YYAGPDPQ--------LHSKIVNQIDYYFSNENLVKDIFLRKNMDAQGWVPITLIAGFKK 399
Query: 352 VKRMSSDIAFIIDALQSSNTVEVQGDKIRKSNDWSKWIQVS 392
V ++ +I IIDA+++S+ VEVQGDKIR+ NDW KWI S
Sbjct: 400 VMDLTDNIQLIIDAIRTSSVVEVQGDKIRRQNDWEKWIMPS 440
>Medtr8g075120.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr8:31755422-31758254 | 20130731
Length = 455
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 8/124 (6%)
Query: 301 MPPETLALRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIA 360
PP L+T I+ QI+YYFSD NL ND YL MD+QGWVP++ +AGF +VK ++ +I
Sbjct: 328 FPPPDSELQTKIVNQIDYYFSDLNLNNDTYLKRNMDDQGWVPLNLIAGFNKVKLLTDNIQ 387
Query: 361 FIIDALQSSNTVEVQGDKIRKSNDWSKWIQVSSGNSGSSTAQIQQSRLVKGADNSQNIDA 420
++DA+++S+ VEVQ DKIR+ N WI +SS + +QI + A N QNID
Sbjct: 388 IVVDAVRTSSVVEVQDDKIRRRN----WITLSSQFHNVNGSQI----AAQLAKNIQNIDL 439
Query: 421 LGDK 424
+K
Sbjct: 440 ETNK 443
>Medtr3g114450.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr3:53444494-53441023 | 20130731
Length = 471
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDALQSSNT 371
I+KQI+YYFSD NL ND +L S MDE GWVP+S +A F RVK ++++I I+D+L++S+
Sbjct: 370 ILKQIDYYFSDVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSV 429
Query: 372 VEVQGDKIRKSNDWSKWIQVSSGNSGSST 400
VEV GDK+RK +W++++ GSS+
Sbjct: 430 VEVNGDKLRKRKEWARFLSPVYQQVGSSS 458
>Medtr3g114340.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr3:53401536-53399026 | 20130731
Length = 432
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 62/78 (79%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDALQSSNT 371
I+KQI+YYFSD NL ND +L S MDE GWVP+S +A F RVK ++++I I+D+L++S+
Sbjct: 300 ILKQIDYYFSDVNLTNDEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSV 359
Query: 372 VEVQGDKIRKSNDWSKWI 389
VEV GDK+RK +W++++
Sbjct: 360 VEVNGDKLRKRKEWARFL 377
>Medtr1g025920.1 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr1:8346097-8339214 | 20130731
Length = 546
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Query: 307 ALRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDAL 366
+L I+ QI+YYFSD NL ND +L S MDE+GWVPI+ +A F RVK ++S+I I+D++
Sbjct: 407 SLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSM 466
Query: 367 QSSNTVEVQGDKIRKSNDWSKWI 389
++SN V+VQGDK+R+ N WI
Sbjct: 467 RNSNVVDVQGDKLRRRN----WI 485
>Medtr1g025920.2 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr1:8346097-8339222 | 20130731
Length = 518
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 307 ALRTSIIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRVKRMSSDIAFIIDAL 366
+L I+ QI+YYFSD NL ND +L S MDE+GWVPI+ +A F RVK ++S+I I+D++
Sbjct: 407 SLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSM 466
Query: 367 QSSNTVEVQ 375
++SN V+VQ
Sbjct: 467 RNSNVVDVQ 475
>Medtr5g027770.1 | hypothetical protein | LC |
chr5:11587777-11589324 | 20130731
Length = 320
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 30 DGRGADVPVMM-GTESWPALSDAQXXXXXXXXXXXXXXXXXXXXXXXGAGVIAARPPSVQ 88
DG+ DVPV++ GT+SWPALSD Q G IA R PSVQ
Sbjct: 171 DGKSVDVPVLVVGTKSWPALSDVQTPKAKNLVDNVSAKGENVAVSVPSVGHIAPRAPSVQ 230
Query: 89 QKSNGPGNLNPSHKGPPSRYQKPGPKRNGNG-APPFXXXXXXXXXXXXXXXXXXXXXXHI 147
K+N GN +P +K P YQKPGPKRN APP HI
Sbjct: 231 -KANSSGNFSPMNKMPSPSYQKPGPKRNVRPVAPP----------------------PHI 267
Query: 148 AVPGYAXXXXXXXXXSVENPLAKPGSQ-APGQAFTPPAHAVEGK 190
AVP YA + ENP KP S A GQ FTPPA A++ K
Sbjct: 268 AVPAYAFPPGSGPYPNAENP--KPVSPVAAGQGFTPPARAIDAK 309
>Medtr2g019620.1 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr2:6438990-6443888 | 20130731
Length = 406
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 308 LRTSIIKQIEYYFSDENLQNDRYLISLM--DEQGWVPISTVAGFKRVKRMSSDIAFIIDA 365
L+ IIKQ+EYYFSDENL D+Y++SL+ +++G+VPI +A F+++KR++ D FI A
Sbjct: 103 LKLKIIKQVEYYFSDENLPTDKYMLSLVKRNKEGFVPIPAIASFRKMKRLTRDHLFIAAA 162
Query: 366 LQSSNTVEVQGDKIR 380
L+ S+ + V GD R
Sbjct: 163 LKESSLLVVSGDGKR 177
>Medtr3g114450.3 | LA-related protein 6 LA RNA-binding domain
protein | HC | chr3:53444494-53442560 | 20130731
Length = 411
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLMDEQGWVPISTVAGFKRV 352
I+KQI+YYFSD NL ND +L S MDE GWVP+S +A F RV
Sbjct: 370 ILKQIDYYFSDVNLTNDEFLKSNMDEHGWVPVSLIANFPRV 410
>Medtr7g117595.3 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48774734 |
20130731
Length = 424
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLM--DEQGWVPISTVAGFKRVKRMSSDIAFIIDALQSS 369
I+KQ+EYYFSD NL +L+ + D +G+VPIS VA FK++K + + + + + L++S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177
Query: 370 NTVEVQ--GDKIRK 381
+ + V G KI++
Sbjct: 178 SKLVVSEDGKKIKR 191
>Medtr7g117595.1 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48774734 |
20130731
Length = 440
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLM--DEQGWVPISTVAGFKRVKRMSSDIAFIIDALQSS 369
I+KQ+EYYFSD NL +L+ + D +G+VPIS VA FK++K + + + + + L++S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177
Query: 370 NTVEVQ--GDKIRK 381
+ + V G KI++
Sbjct: 178 SKLVVSEDGKKIKR 191
>Medtr7g117595.2 | LA-related protein 6 LA RNA-binding domain
protein, putative | HC | chr7:48763422-48773797 |
20130731
Length = 363
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 312 IIKQIEYYFSDENLQNDRYLISLM--DEQGWVPISTVAGFKRVKRMSSDIAFIIDALQSS 369
I+KQ+EYYFSD NL +L+ + D +G+VPIS VA FK++K + + + + + L++S
Sbjct: 118 ILKQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALITSHSQLANVLRNS 177
Query: 370 NTVEVQ--GDKIRK 381
+ + V G KI++
Sbjct: 178 SKLVVSEDGKKIKR 191