Miyakogusa Predicted Gene

Lj2g3v2971720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2971720.1 tr|G7K2X2|G7K2X2_MEDTR Geranylgeranyl reductase
OS=Medicago truncatula GN=MTR_5g087700 PE=4 SV=1,82.28,0,no
description,NULL; FAD/NAD(P)-binding domain,NULL;
RNGMNOXGNASE,Aromatic-ring hydroxylase-like;
se,NODE_63261_length_1027_cov_40.390457.path2.1
         (316 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g087700.1 | pyridine nucleotide-disulfide oxidoreductase |...   469   e-132

>Medtr5g087700.1 | pyridine nucleotide-disulfide oxidoreductase | HC
           | chr5:38025002-38027118 | 20130731
          Length = 450

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/316 (73%), Positives = 253/316 (80%), Gaps = 3/316 (0%)

Query: 1   MAAKIQPFLPSLSIQTPTSKPKPRSLTXXXXXXXXXXXXXXGRKLRXXXXXXXXXXXXXX 60
           MA KIQ F PS S+  PTSKPK    +              GRKLR              
Sbjct: 1   MALKIQTFSPSFSV--PTSKPKQHFHSITISASNSTRPSIAGRKLRAAVIGGGPAGSSAA 58

Query: 61  XXXXXXXIETFLFERNPPSVPKPCGGAIPLCMLEEFDIPHHLIDRHVTSMRIFSPSNIAV 120
                  +ETFLFERNPPS PKPCGGAIPLCMLEEFDIPHHLIDRHVT MRIFSPSNIAV
Sbjct: 59  EALASGGVETFLFERNPPSTPKPCGGAIPLCMLEEFDIPHHLIDRHVTQMRIFSPSNIAV 118

Query: 121 DFGKTLKPHEFIAMVRREVLDSFLRSRAVSSGATLVSGLVTSFDLRSTPRSPYTVHYTAD 180
           DFGKTLKP+EFIAM+RREVLDSFLRSRAVS+GA  +SGLVTS D+ ++P SPYT++YT +
Sbjct: 119 DFGKTLKPNEFIAMLRREVLDSFLRSRAVSAGAEHISGLVTSLDVPTSPNSPYTINYT-N 177

Query: 181 KNSSRRSLAVDVVIGADGANSRVAKSISAGNYSTAIAFQERIKLPDEKMAYYENLAEMYI 240
           K SS+ SLAVDVVIGADGANSRVAKSISAG+Y+ AIAFQERIKL DEKM YYENLAEMYI
Sbjct: 178 KTSSKNSLAVDVVIGADGANSRVAKSISAGDYTCAIAFQERIKLSDEKMKYYENLAEMYI 237

Query: 241 GDDVSPDFYAWVFPKCDHVAVGTGTVRSKQDIKKFQRGIRERVRSKINGGKVIKVEAHPI 300
           GDDVSPDFYAWVFPKCDHVAVGTGTVRSK DIK +QR IRER  SKI+GGKVIKVEAHPI
Sbjct: 238 GDDVSPDFYAWVFPKCDHVAVGTGTVRSKHDIKLYQRAIRERAMSKIDGGKVIKVEAHPI 297

Query: 301 PEHPRPVRVRGRVALI 316
           PEHPRP+RVRGRVAL+
Sbjct: 298 PEHPRPIRVRGRVALV 313