Miyakogusa Predicted Gene

Lj2g3v2959580.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2959580.2 Non Characterized Hit- tr|I1M7C5|I1M7C5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23061
PE,75.62,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
MULE,MULE transposase domain; SWIM,Zinc f,CUFF.39521.2
         (986 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC | chr6:17...   107   7e-23
Medtr7g087480.1 | hypothetical protein | HC | chr7:34052848-3405...    80   7e-15
Medtr6g025550.1 | hypothetical protein | LC | chr6:8837741-88352...    64   5e-10
Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC | chr4:12...    63   1e-09
Medtr0558s0020.1 | FAR1 DNA-binding domain protein | HC | scaffo...    60   7e-09
Medtr8g446020.1 | FAR1-related sequence protein, putative | HC |...    59   3e-08
Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-76698...    58   4e-08
Medtr0645s0010.1 | FAR-RED impaired response-like protein, putat...    53   2e-06
Medtr6g090505.1 | FAR1 DNA-binding domain protein | HC | chr6:34...    52   4e-06

>Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC |
           chr6:17965556-17964534 | 20130731
          Length = 340

 Score =  107 bits (266), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 28/210 (13%)

Query: 50  VKEHSHSMVSGNKVNNLLPRRHFSSVGRTMPETYQGVGLVPSGVMSISLNGSHSATENIH 109
           + +H+H++V        L +RH     R + ET         G++   +N     T    
Sbjct: 115 IMDHNHALVP-------LEQRHLLRSMRKVSET-------KGGLIKSMVNAGMKVTHVWS 160

Query: 110 GIRNNPAPAAAAGETSRPVKIGPVSMNYTVRRPPTRNRTFGRDAQNMLEYFKKVQAENPG 169
            +          G T + V     +  YT +    +    G DAQ+++ + +  QA++  
Sbjct: 161 YLGEEVGGFDKLGMTMKDVH----NFVYTEKSKLIK----GGDAQSLINHLQNRQAQDAM 212

Query: 170 FFYAIQLDEDSHMSNVFWADARSRAAYSHFGDAVSLDTTYRVYQYRVPFAPFTGVNHHGQ 229
           F+Y++QLD++S ++NVFW D +S+  Y  FGD V  DTTYR   Y +  APF GV HH Q
Sbjct: 213 FYYSVQLDQESRLTNVFWRDGKSKVDYDCFGDVVVFDTTYRTNTYDLICAPFVGVIHHLQ 272

Query: 230 MILFGCALLLDNSEASF------VWLLKTF 253
            ++FGC LL D +   F      +W+ K +
Sbjct: 273 NVMFGCVLLSDETSCVFGFPNCCIWISKFY 302


>Medtr7g087480.1 | hypothetical protein | HC |
           chr7:34052848-34055798 | 20130731
          Length = 283

 Score = 80.5 bits (197), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 6/118 (5%)

Query: 808 VWPLQDETT--RFNLNDSGASVQLVADRNLPQTSPVSLQQDDGPPENMV---ALPCLKTM 862
           +WP QD  +  R N  D G     VA+ N+    P   Q D    EN+V   +LP LK+M
Sbjct: 151 LWPRQDSDSLARLNCGDLGVPTSPVAEVNVSGL-PTCFQCDITSSENLVLEESLPHLKSM 209

Query: 863 TWVMQNKNSTPESRVAVINLKLQDFNRTPSIESVVTFNLTSVSLEPMLNYMTHINEQL 920
           TW M+++ S+P  RVA+I+LKL D++++ + E+ V F LT  +LE ML  MT + E+L
Sbjct: 210 TWTMESRGSSPAERVAIISLKLHDYSKSTAGETDVKFQLTRDTLETMLKSMTFVGERL 267


>Medtr6g025550.1 | hypothetical protein | LC | chr6:8837741-8835263
           | 20130731
          Length = 128

 Score = 64.3 bits (155), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query: 301 LAHVCHSHPNFQVELYNCINLTETIEEFDSSWNSIISKYELGRNDWLQSLYGIRAKWVPA 360
           L+H+ H H  F+ ++Y CI    T++EFD  W ++I+KY L    W++++Y IR KW+  
Sbjct: 47  LSHIHHEHSEFKNQIYKCIQQYTTVKEFDFDWEALINKYVLQDTQWVKTIYSIREKWISR 106

Query: 361 Y 361
           +
Sbjct: 107 F 107


>Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC |
           chr4:12632859-12628018 | 20130731
          Length = 668

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 150 GRDAQNMLEYFKKVQAENPGFFYAIQLDEDSHMSNVFWADARSRAAYSHFGDAVSLDTTY 209
           G D  ++L+Y +  +  +  F YA  LDE+  + ++FW+ A     Y  +GD V  DTTY
Sbjct: 251 GSDVMDLLKYCEGAKKTSSKFQYAYTLDEERRLEHIFWSSASCFDWYQKYGDVVVFDTTY 310

Query: 210 RVYQYRVPFAPFTG 223
           +V  Y +PF  F G
Sbjct: 311 KVNSYEMPFGIFCG 324



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 357 WVPAYFRDSFFAVISPNQRFGG--SFFDGFVNQQTTLPIFFRQYELALENWFEKEIESDF 414
           W  AY RD FF  ++   R     +F   F+N  T+L  F +Q ++A+++  +KE     
Sbjct: 327 WALAYLRDHFFGGMTTTGRSESINAFIKRFINSHTSLTDFAKQVDVAIDDIKQKEDHDIM 386

Query: 415 ETICTTPVLKTPSPMEKQAADLYTQKIFLKFQEELVETFAY 455
              C    +K  SP+++QA  + T+  F KFQEEL   F +
Sbjct: 387 LEKCKGSNMKLMSPLQEQAHCVLTRFSFQKFQEELASIFLH 427


>Medtr0558s0020.1 | FAR1 DNA-binding domain protein | HC |
           scaffold0558:3043-3933 | 20130731
          Length = 296

 Score = 60.5 bits (145), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 152 DAQNMLEYFKKVQAENPGFFYAIQLDEDSHMSNVFWADARSRAAYSHFGDAVSLDTTYRV 211
           +A  + E+F+      P F+Y IQ+D   +++++FWAD   +  YS FGD +SLDTTYR 
Sbjct: 229 EATIIQEFFRNEALSKPSFYYDIQVDAAENIASIFWADGIMQLDYSLFGDVISLDTTYRT 288

Query: 212 -YQYR 215
             QYR
Sbjct: 289 NNQYR 293


>Medtr8g446020.1 | FAR1-related sequence protein, putative | HC |
           chr8:17591916-17592802 | 20130731
          Length = 256

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%)

Query: 152 DAQNMLEYFKKVQAENPGFFYAIQLDEDSHMSNVFWADARSRAAYSHFGDAVSLDTTYRV 211
           +A  + E+F+      P F+Y IQ+D    ++++FWAD   +  YS FGD +S DTTYR 
Sbjct: 189 EATVIQEFFRNEALSKPSFYYDIQVDAAEDIASIFWADGIMQLDYSLFGDVISFDTTYRT 248

Query: 212 YQYRVPFA 219
               +P  
Sbjct: 249 NNQYLPLG 256


>Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-7669835
           | 20130731
          Length = 337

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 273 IQTAVSQVMPQVRHRINKWDVLREGHEKLAHVCHSHPNFQVELYNCINLTETIEEFDSSW 332
           ++ A+  V P   H +    + R     +       P F  +   C+     IEEF+S W
Sbjct: 1   MRNAIRTVFPNDHHHLCAKHLARNAASNI-----KTPQFVPKFKQCMFGDFDIEEFESRW 55

Query: 333 NSIISKYELGRNDWLQSLYGIRAKWVPAYFRDSFFAVISPNQRFGG--SFFDGFVNQQTT 390
            +   ++ L  N W+  LY  R +   A+   +F+A      R+ G  S F  +V+  + 
Sbjct: 56  ENFFGEFGLENNKWIHELYEKRNQCSTAHIWGTFYAGFRTTSRWEGLHSEFGKYVSVLSN 115

Query: 391 LPIFFRQYELALENWFEKEIESDFETICTTPVLKTP-SPMEKQAADLYTQKI 441
           L  F   +   L     +EIE+D+ +     VL+T    +E  AA +YT+K+
Sbjct: 116 LIDFLNHFLRWLNYERYREIEADYASFFGETVLQTQHKSLENLAAKIYTRKL 167


>Medtr0645s0010.1 | FAR-RED impaired response-like protein, putative
           | LC | scaffold0645:7070-7447 | 20130731
          Length = 125

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 357 WVPAYFRDSFFAVISPNQRFGG--SFFDGFVNQQTTLPIFFRQYELALENWFEKEIESDF 414
           W  +Y RD F   +       G  SF   + N   +L  F   +E A++++   E+ +DF
Sbjct: 2   WASSYMRDHFVCRVRTTSICEGVNSFIRKYKN---SLVDFLHNFERAVKDYRHNELLADF 58

Query: 415 ETICTTPVLKTPSP-MEKQAADLYTQKIFLKFQEELVETFAYTANRVEEDGENSIFRVAK 473
           ++    PVL T  P  E++A++++T K FL+ ++ + +  A       E G + IFRV  
Sbjct: 59  KSFYYKPVLTTSLPGFEREASEIFTFKKFLEVKKAIKDVAAEFVTHHAEVGNSVIFRVNV 118

Query: 474 FEDD 477
           +  D
Sbjct: 119 YRKD 122


>Medtr6g090505.1 | FAR1 DNA-binding domain protein | HC |
           chr6:34400401-34402867 | 20130731
          Length = 364

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 158 EYFKKVQAENPGFFYAIQLDEDSHMSNVFWADARSRAAYSHFGDAVSLDTTYRV-YQYR 215
           E+F+      P F+Y IQ+D    ++++F A+   +  YS FGD +S DTTYR   QYR
Sbjct: 170 EFFRNEALSKPSFYYDIQVDAAEDITSIFLANGIMQLDYSLFGDVISFDTTYRTNNQYR 228