Miyakogusa Predicted Gene

Lj2g3v2926350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2926350.1 CUFF.39498.1
         (533 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g087490.1 | molybdenum cofactor biosynthesis protein CNX1 ...   919   0.0  
Medtr5g087490.3 | molybdenum cofactor biosynthesis protein CNX1 ...   802   0.0  
Medtr5g087490.2 | molybdenum cofactor biosynthesis protein CNX1 ...   603   e-172

>Medtr5g087490.1 | molybdenum cofactor biosynthesis protein CNX1 |
           HC | chr5:37915144-37906738 | 20130731
          Length = 653

 Score =  919 bits (2375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/517 (86%), Positives = 478/517 (92%)

Query: 2   RVRILVKTTQGNDIRPVGVDIEKDAVVLTAGERLGASEIGLLATVGVTMVKVYPTPTVAV 61
           RVRILVKT QGNDIRPVGVDIEKDAVVLT+GE LGASEIGLLA VG T VKVYPTPT+AV
Sbjct: 121 RVRILVKTNQGNDIRPVGVDIEKDAVVLTSGEILGASEIGLLAAVGATTVKVYPTPTIAV 180

Query: 62  LSTGDELVEPTTGHLSRGQIRDSNRAMLLAALAQHQCKVLDLSIAKDDEEYQGGVLDKAF 121
           LSTGDELVEP+TGHLSRGQIRDSNRAMLLAA  QH CKV+DL IAKDDEE QG +LDKAF
Sbjct: 181 LSTGDELVEPSTGHLSRGQIRDSNRAMLLAAAVQHHCKVVDLGIAKDDEESQGRILDKAF 240

Query: 122 ASGINILLTSGGVSMGDKDFIKPLLEKRGKVHFSKVSMKPGKPCTFAEIDFQSTDSKILA 181
           ASGINIL+TSGGVSMGDKDFI+PLLEKRGK+HF KVS+KPGKP TFAEID QST+SKILA
Sbjct: 241 ASGINILITSGGVSMGDKDFIRPLLEKRGKLHFDKVSIKPGKPFTFAEIDSQSTESKILA 300

Query: 182 FALPGNPVSSLVCFHLYVVPAIRQLAGWTNPHHLRVHARLQRPIKTDPFRAEYHRATIIW 241
           F LPGNPVSS VCFHL+VVPAIRQLAGWTNPHHLRV ARLQ+PIKTD FR EYHRAT+IW
Sbjct: 301 FGLPGNPVSSSVCFHLFVVPAIRQLAGWTNPHHLRVQARLQQPIKTDQFRPEYHRATVIW 360

Query: 242 TDNDGTGSPGFVAQSTGHQRSSRLLSMKSANALLEFPATGDVLSAGTPVSAIIISDLTPM 301
           TDNDGTGSPGFVA+STGHQRSSRLLSMKSANA LEFPATG V+SAGTPV+AIIIS+LTP+
Sbjct: 361 TDNDGTGSPGFVAKSTGHQRSSRLLSMKSANAFLEFPATGSVVSAGTPVAAIIISNLTPV 420

Query: 302 AFDENLMSPDSASAFPGIKSHKVTTASSEDAEFRVAILTVSDTVAMGAGPDRSGPRAVSV 361
            F +N +S DS  A PGIKS+K+TT SS  A+ RVAILTVSDTVA GAGPDRSGPRAVSV
Sbjct: 421 DFAKNHISSDSNFAPPGIKSNKITTDSSGSADLRVAILTVSDTVAAGAGPDRSGPRAVSV 480

Query: 362 INSSSKRLGGARVVETAVVPDNVAKIQNILRRWSDIEQMDFIITLGGTGFTSRDVTPEAT 421
           INSSS+RLGGA+VV T+VVPDNVAKIQ+ILRRWSD EQMD IITLGGTGFTSRDVTPEAT
Sbjct: 481 INSSSERLGGAKVVATSVVPDNVAKIQDILRRWSDNEQMDLIITLGGTGFTSRDVTPEAT 540

Query: 422 KELIEKETPGLLHVMMQESLKVTPSAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLP 481
           KELIEKETPGLL+VMMQESLKVTPSAMLSRSAAGIRGSTLIINMPGNPNAVAEC EALLP
Sbjct: 541 KELIEKETPGLLYVMMQESLKVTPSAMLSRSAAGIRGSTLIINMPGNPNAVAECTEALLP 600

Query: 482 ALKHGLKQLRGDKREKHPRHVPHAETVPTDAWEQSYM 518
           ALKHGLKQLRGDKREKHPRH+PHAE VPTD WE+SYM
Sbjct: 601 ALKHGLKQLRGDKREKHPRHIPHAEAVPTDVWERSYM 637


>Medtr5g087490.3 | molybdenum cofactor biosynthesis protein CNX1 |
           HC | chr5:37915144-37907279 | 20130731
          Length = 582

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/460 (86%), Positives = 424/460 (92%)

Query: 2   RVRILVKTTQGNDIRPVGVDIEKDAVVLTAGERLGASEIGLLATVGVTMVKVYPTPTVAV 61
           RVRILVKT QGNDIRPVGVDIEKDAVVLT+GE LGASEIGLLA VG T VKVYPTPT+AV
Sbjct: 121 RVRILVKTNQGNDIRPVGVDIEKDAVVLTSGEILGASEIGLLAAVGATTVKVYPTPTIAV 180

Query: 62  LSTGDELVEPTTGHLSRGQIRDSNRAMLLAALAQHQCKVLDLSIAKDDEEYQGGVLDKAF 121
           LSTGDELVEP+TGHLSRGQIRDSNRAMLLAA  QH CKV+DL IAKDDEE QG +LDKAF
Sbjct: 181 LSTGDELVEPSTGHLSRGQIRDSNRAMLLAAAVQHHCKVVDLGIAKDDEESQGRILDKAF 240

Query: 122 ASGINILLTSGGVSMGDKDFIKPLLEKRGKVHFSKVSMKPGKPCTFAEIDFQSTDSKILA 181
           ASGINIL+TSGGVSMGDKDFI+PLLEKRGK+HF KVS+KPGKP TFAEID QST+SKILA
Sbjct: 241 ASGINILITSGGVSMGDKDFIRPLLEKRGKLHFDKVSIKPGKPFTFAEIDSQSTESKILA 300

Query: 182 FALPGNPVSSLVCFHLYVVPAIRQLAGWTNPHHLRVHARLQRPIKTDPFRAEYHRATIIW 241
           F LPGNPVSS VCFHL+VVPAIRQLAGWTNPHHLRV ARLQ+PIKTD FR EYHRAT+IW
Sbjct: 301 FGLPGNPVSSSVCFHLFVVPAIRQLAGWTNPHHLRVQARLQQPIKTDQFRPEYHRATVIW 360

Query: 242 TDNDGTGSPGFVAQSTGHQRSSRLLSMKSANALLEFPATGDVLSAGTPVSAIIISDLTPM 301
           TDNDGTGSPGFVA+STGHQRSSRLLSMKSANA LEFPATG V+SAGTPV+AIIIS+LTP+
Sbjct: 361 TDNDGTGSPGFVAKSTGHQRSSRLLSMKSANAFLEFPATGSVVSAGTPVAAIIISNLTPV 420

Query: 302 AFDENLMSPDSASAFPGIKSHKVTTASSEDAEFRVAILTVSDTVAMGAGPDRSGPRAVSV 361
            F +N +S DS  A PGIKS+K+TT SS  A+ RVAILTVSDTVA GAGPDRSGPRAVSV
Sbjct: 421 DFAKNHISSDSNFAPPGIKSNKITTDSSGSADLRVAILTVSDTVAAGAGPDRSGPRAVSV 480

Query: 362 INSSSKRLGGARVVETAVVPDNVAKIQNILRRWSDIEQMDFIITLGGTGFTSRDVTPEAT 421
           INSSS+RLGGA+VV T+VVPDNVAKIQ+ILRRWSD EQMD IITLGGTGFTSRDVTPEAT
Sbjct: 481 INSSSERLGGAKVVATSVVPDNVAKIQDILRRWSDNEQMDLIITLGGTGFTSRDVTPEAT 540

Query: 422 KELIEKETPGLLHVMMQESLKVTPSAMLSRSAAGIRGSTL 461
           KELIEKETPGLL+VMMQESLKVTPSAMLSRSAAGIRGSTL
Sbjct: 541 KELIEKETPGLLYVMMQESLKVTPSAMLSRSAAGIRGSTL 580


>Medtr5g087490.2 | molybdenum cofactor biosynthesis protein CNX1 |
           HC | chr5:37915144-37911233 | 20130731
          Length = 475

 Score =  603 bits (1555), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 296/352 (84%), Positives = 319/352 (90%)

Query: 2   RVRILVKTTQGNDIRPVGVDIEKDAVVLTAGERLGASEIGLLATVGVTMVKVYPTPTVAV 61
           RVRILVKT QGNDIRPVGVDIEKDAVVLT+GE LGASEIGLLA VG T VKVYPTPT+AV
Sbjct: 121 RVRILVKTNQGNDIRPVGVDIEKDAVVLTSGEILGASEIGLLAAVGATTVKVYPTPTIAV 180

Query: 62  LSTGDELVEPTTGHLSRGQIRDSNRAMLLAALAQHQCKVLDLSIAKDDEEYQGGVLDKAF 121
           LSTGDELVEP+TGHLSRGQIRDSNRAMLLAA  QH CKV+DL IAKDDEE QG +LDKAF
Sbjct: 181 LSTGDELVEPSTGHLSRGQIRDSNRAMLLAAAVQHHCKVVDLGIAKDDEESQGRILDKAF 240

Query: 122 ASGINILLTSGGVSMGDKDFIKPLLEKRGKVHFSKVSMKPGKPCTFAEIDFQSTDSKILA 181
           ASGINIL+TSGGVSMGDKDFI+PLLEKRGK+HF KVS+KPGKP TFAEID QST+SKILA
Sbjct: 241 ASGINILITSGGVSMGDKDFIRPLLEKRGKLHFDKVSIKPGKPFTFAEIDSQSTESKILA 300

Query: 182 FALPGNPVSSLVCFHLYVVPAIRQLAGWTNPHHLRVHARLQRPIKTDPFRAEYHRATIIW 241
           F LPGNPVSS VCFHL+VVPAIRQLAGWTNPHHLRV ARLQ+PIKTD FR EYHRAT+IW
Sbjct: 301 FGLPGNPVSSSVCFHLFVVPAIRQLAGWTNPHHLRVQARLQQPIKTDQFRPEYHRATVIW 360

Query: 242 TDNDGTGSPGFVAQSTGHQRSSRLLSMKSANALLEFPATGDVLSAGTPVSAIIISDLTPM 301
           TDNDGTGSPGFVA+STGHQRSSRLLSMKSANA LEFPATG V+SAGTPV+AIIIS+LTP+
Sbjct: 361 TDNDGTGSPGFVAKSTGHQRSSRLLSMKSANAFLEFPATGSVVSAGTPVAAIIISNLTPV 420

Query: 302 AFDENLMSPDSASAFPGIKSHKVTTASSEDAEFRVAILTVSDTVAMGAGPDR 353
            F +N +S DS  A PGIKS+K+TT SS  A+ RVAILTVSDTVA GAGPDR
Sbjct: 421 DFAKNHISSDSNFAPPGIKSNKITTDSSGSADLRVAILTVSDTVAAGAGPDR 472