Miyakogusa Predicted Gene

Lj2g3v2925130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2925130.1 Non Characterized Hit- tr|I1JVG6|I1JVG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12658
PE,40.15,2e-18,SUBFAMILY NOT NAMED,NULL; SER/THR-RICH PROTEIN T10 IN
DGCR REGION,Protein of unknown function DUF833,gene.g43935.t1.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g083440.1 | ser/thr-rich protein T10 in DGCR region-like p...   226   1e-59
Medtr3g074080.1 | ser/thr-rich protein T10 in DGCR region-like p...   127   5e-30

>Medtr4g083440.1 | ser/thr-rich protein T10 in DGCR region-like
           protein | HC | chr4:32470418-32471984 | 20130731
          Length = 275

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 136/188 (72%), Gaps = 24/188 (12%)

Query: 32  SRSLGSIVEGLSKGNQSPEEFAEQVLKEAHQYNGFNLILADMSTSSMVYVFNRPKPDLLS 91
           S + G +     + ++SPEEFAE+VLKEAH YNGFNL+LAD+ TS+MVYVFNRP    LS
Sbjct: 87  SNTRGDLPLRFLQSDKSPEEFAEEVLKEAHLYNGFNLVLADICTSTMVYVFNRPNHGYLS 146

Query: 92  VAPGVH-------------AERLRHSFKELIDQYGESEFPIKEMVEKLMTNTIKDEE-YM 137
           V PG+H             AERLRHSFKEL+DQYG+ EFPIKEMVEKLMTNT+KD++  +
Sbjct: 147 VTPGIHVLTNASLDAPWSKAERLRHSFKELVDQYGDGEFPIKEMVEKLMTNTVKDDDKCL 206

Query: 138 LPGIYPPERELPVSS----------GRYGTRSSSALLVKSNKEATFYEKHLDQEKWKEKM 187
           LPGI PPE E P+SS          G YGTRS+SAL V SNKE TFYEKHLDQ++WK+ M
Sbjct: 207 LPGIRPPEFEFPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKEVTFYEKHLDQKQWKDNM 266

Query: 188 VTYQIIEA 195
           VTYQI E 
Sbjct: 267 VTYQISET 274


>Medtr3g074080.1 | ser/thr-rich protein T10 in DGCR region-like
           protein | LC | chr3:33453395-33449150 | 20130731
          Length = 385

 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 120/206 (58%), Gaps = 26/206 (12%)

Query: 13  SQIKIFLLPTLEATFHFVSSRSLGSIVEGLSKGNQSPEEFAEQVLKEAHQYNGFNLILAD 72
           SQ K+  L  +        +++ G +     K +++P+EFAE + +EA  YNGFNL++AD
Sbjct: 58  SQGKVAFLTNVLELHTCPEAKTRGDLPLMFLKSSKNPKEFAESLKREAQYYNGFNLVIAD 117

Query: 73  MSTSSMVYVFNRPKPDLLSVA---PGVH-------------AERLRHSFKELIDQYGESE 116
           +++ SMVY+ NRPK   ++V    PG+H             A+RL+  FKE + + GE E
Sbjct: 118 INSKSMVYISNRPKGQPITVQEVPPGLHVLSNAKLNSPWHKAQRLQFRFKEHLAKNGEGE 177

Query: 117 FPIKEMVEKLMTNTIKDEEYMLPGIYPPERELPVSS---------GRYGTRSSSALLVKS 167
             +KE+++KLM + IK ++ MLP I   + E  +SS         G YGTRSS+AL V+S
Sbjct: 178 IHVKEVIKKLMKDKIKADKSMLPNICSLDWEFNLSSIFVEVETPLGVYGTRSSAALTVRS 237

Query: 168 NKEATFYEKHLDQEK-WKEKMVTYQI 192
           + + +FYE +LD +  WK+ ++ + I
Sbjct: 238 SGKVSFYEDYLDDDNVWKDHVIDFHI 263