Miyakogusa Predicted Gene

Lj2g3v2905080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2905080.2 Non Characterized Hit- tr|B9SUJ2|B9SUJ2_RICCO
Structural maintenance of chromosome, putative OS=Rici,92.78,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; seg,NULL; SMC_N,RecF,CUFF.39507.2
         (268 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g051825.2 | structural maintenance of chromosomes protein ...   477   e-135
Medtr1g051825.3 | structural maintenance of chromosomes protein ...   477   e-135
Medtr1g051825.1 | structural maintenance of chromosomes protein ...   476   e-135
Medtr3g110058.1 | structural maintenance of chromosomes protein ...   153   2e-37
Medtr8g037325.1 | structural maintenance of chromosomes protein ...   116   2e-26
Medtr8g072890.1 | structural maintenance of chromosomes protein ...    78   1e-14
Medtr7g091420.1 | structural maintenance of chromosomes protein ...    76   4e-14
Medtr0003s0460.1 | structural maintenance of chromosomes protein...    50   3e-06
Medtr5g086975.1 | hypothetical protein | LC | chr5:37630389-3763...    49   5e-06

>Medtr1g051825.2 | structural maintenance of chromosomes protein |
           HC | chr1:20727128-20747784 | 20130731
          Length = 1204

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/268 (87%), Positives = 242/268 (90%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           M+IKQ+VIEGFKSYREQIATE FSPKVNCVVGANGSGKT FFHAIRFVLSDLFQNLRSED
Sbjct: 1   MFIKQVVIEGFKSYREQIATEDFSPKVNCVVGANGSGKTIFFHAIRFVLSDLFQNLRSED 60

Query: 61  RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE 120
           RHALLHEGAGH VLSAFVEIVFDNSDNRIPVDKEEV LRRTIGLKKDEYFLDGKHITKTE
Sbjct: 61  RHALLHEGAGHPVLSAFVEIVFDNSDNRIPVDKEEVHLRRTIGLKKDEYFLDGKHITKTE 120

Query: 121 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 180
           VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
Sbjct: 121 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 180

Query: 181 ETGNKRKQIIQVVQYXXXXXXXXXXXXXXXXXYQQLDKQRKSLEYAIYNKEVQDAQQKLI 240
           +TGNKRKQIIQVVQY                 YQ LDKQRKSLEYAI++KEVQDAQQKL 
Sbjct: 181 DTGNKRKQIIQVVQYLDERLKELDEEKEELRKYQHLDKQRKSLEYAIFSKEVQDAQQKLA 240

Query: 241 EIEEARNKVSETSSKMYNDVLDAHEKSK 268
           EIE+ARNKVSE S+K YN+VLDA EKSK
Sbjct: 241 EIEQARNKVSEISAKKYNEVLDAQEKSK 268


>Medtr1g051825.3 | structural maintenance of chromosomes protein |
           HC | chr1:20727036-20747784 | 20130731
          Length = 1204

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/268 (87%), Positives = 242/268 (90%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           M+IKQ+VIEGFKSYREQIATE FSPKVNCVVGANGSGKT FFHAIRFVLSDLFQNLRSED
Sbjct: 1   MFIKQVVIEGFKSYREQIATEDFSPKVNCVVGANGSGKTIFFHAIRFVLSDLFQNLRSED 60

Query: 61  RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE 120
           RHALLHEGAGH VLSAFVEIVFDNSDNRIPVDKEEV LRRTIGLKKDEYFLDGKHITKTE
Sbjct: 61  RHALLHEGAGHPVLSAFVEIVFDNSDNRIPVDKEEVHLRRTIGLKKDEYFLDGKHITKTE 120

Query: 121 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 180
           VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
Sbjct: 121 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 180

Query: 181 ETGNKRKQIIQVVQYXXXXXXXXXXXXXXXXXYQQLDKQRKSLEYAIYNKEVQDAQQKLI 240
           +TGNKRKQIIQVVQY                 YQ LDKQRKSLEYAI++KEVQDAQQKL 
Sbjct: 181 DTGNKRKQIIQVVQYLDERLKELDEEKEELRKYQHLDKQRKSLEYAIFSKEVQDAQQKLA 240

Query: 241 EIEEARNKVSETSSKMYNDVLDAHEKSK 268
           EIE+ARNKVSE S+K YN+VLDA EKSK
Sbjct: 241 EIEQARNKVSEISAKKYNEVLDAQEKSK 268


>Medtr1g051825.1 | structural maintenance of chromosomes protein |
           HC | chr1:20727826-20747759 | 20130731
          Length = 1228

 Score =  476 bits (1226), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/268 (87%), Positives = 242/268 (90%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           M+IKQ+VIEGFKSYREQIATE FSPKVNCVVGANGSGKT FFHAIRFVLSDLFQNLRSED
Sbjct: 25  MFIKQVVIEGFKSYREQIATEDFSPKVNCVVGANGSGKTIFFHAIRFVLSDLFQNLRSED 84

Query: 61  RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE 120
           RHALLHEGAGH VLSAFVEIVFDNSDNRIPVDKEEV LRRTIGLKKDEYFLDGKHITKTE
Sbjct: 85  RHALLHEGAGHPVLSAFVEIVFDNSDNRIPVDKEEVHLRRTIGLKKDEYFLDGKHITKTE 144

Query: 121 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 180
           VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
Sbjct: 145 VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ 204

Query: 181 ETGNKRKQIIQVVQYXXXXXXXXXXXXXXXXXYQQLDKQRKSLEYAIYNKEVQDAQQKLI 240
           +TGNKRKQIIQVVQY                 YQ LDKQRKSLEYAI++KEVQDAQQKL 
Sbjct: 205 DTGNKRKQIIQVVQYLDERLKELDEEKEELRKYQHLDKQRKSLEYAIFSKEVQDAQQKLA 264

Query: 241 EIEEARNKVSETSSKMYNDVLDAHEKSK 268
           EIE+ARNKVSE S+K YN+VLDA EKSK
Sbjct: 265 EIEQARNKVSEISAKKYNEVLDAQEKSK 292


>Medtr3g110058.1 | structural maintenance of chromosomes protein |
           HC | chr3:50931665-50924711 | 20130731
          Length = 527

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 91/121 (75%), Gaps = 2/121 (1%)

Query: 122 MNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQE 181
           M+LLESAGFSRSNPYYVVQQGKIA+LTLMK+SERLDLLKEIGGTR YEERRRES KI+Q 
Sbjct: 1   MSLLESAGFSRSNPYYVVQQGKIAALTLMKNSERLDLLKEIGGTRTYEERRRESFKIIQN 60

Query: 182 TGNKRKQIIQVVQYXXXXXXXXXXXXXXXXXYQQLDKQRKSLEYAIYNKEVQDAQQKLIE 241
           TG  +K I QVVQ                  Y  L+KQRKSLEYAI +KEVQDA+Q L +
Sbjct: 61  TG--KKHIDQVVQNLDERLKELDEEKEELGKYHDLEKQRKSLEYAILDKEVQDAKQNLAK 118

Query: 242 I 242
           +
Sbjct: 119 V 119


>Medtr8g037325.1 | structural maintenance of chromosomes protein |
           HC | chr8:13910705-13922893 | 20130731
          Length = 1175

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 114/196 (58%), Gaps = 8/196 (4%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVL--SDLFQNLRS 58
           MYIK+I +EGFKSY  +     F    N + G NGSGK+N   +I FVL  ++L Q +R 
Sbjct: 1   MYIKEICLEGFKSYATRTVVPGFDRFFNAITGLNGSGKSNILDSICFVLGITNLTQ-VRC 59

Query: 59  EDRHALLHEGAGHQVLSAFVEIVFDNSD-NRIPVDKE---EVRLRRTIGLK-KDEYFLDG 113
            +   L+++     +  A V IVFDNS+  R P+  E   E+ + R I +  +++Y ++G
Sbjct: 60  SNLQELVYKQGQAGITKATVSIVFDNSERGRSPLGYEAHSEITVTRQIVVGGRNKYLING 119

Query: 114 KHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRR 173
           K    ++V NL  S   + +NP++++ QG+I  +  MK  E L +L+E  GTR+YE ++ 
Sbjct: 120 KLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKE 179

Query: 174 ESLKIMQETGNKRKQI 189
            +LK +++  +K  +I
Sbjct: 180 AALKTLEKKQSKVDEI 195


>Medtr8g072890.1 | structural maintenance of chromosomes protein |
           HC | chr8:30809876-30822392 | 20130731
          Length = 1233

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           ++I+++V+  FKSY  +     F    + VVG NGSGK+N   A+ FV     + +R   
Sbjct: 14  LFIQEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNK 73

Query: 61  RHALLHEGAGHQVL-SAFVEIVF-------DNSDNRIPVDKEEVRLRRTIGLKKDEYFLD 112
              L+H  + HQ L SA V + F       D +   +P   + V  R        +Y+++
Sbjct: 74  VSELIHNSSNHQNLDSAGVSVHFQEIVDLEDGTYETVP-GTDFVITRVAFRDNSSKYYIN 132

Query: 113 GKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMK-------DSERLDLLKEIGGT 165
            +    TEV   L+  G    N  +++ QG++  ++LMK       D   L+ L++I GT
Sbjct: 133 NRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGT 192

Query: 166 RVYEERRRESLKIMQETGNKRKQIIQVVQ 194
             Y E+  ES K ++    +R  ++Q+V+
Sbjct: 193 NKYVEKIDESYKQLESLNERRSGVVQMVK 221


>Medtr7g091420.1 | structural maintenance of chromosomes protein |
           HC | chr7:36130079-36133932 | 20130731
          Length = 399

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 1   MYIKQIVIEGFKSYREQIATETFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           ++IK++V+  FKSY  +     F    + VVG NGSGK+N   A+ FV     +  R   
Sbjct: 9   LFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQRRLNK 68

Query: 61  RHALLHEGAGHQVLSA------FVEIVFDNSDNRIPVDKEEVRLRRTIGLKKD--EYFLD 112
              L+H    H  L +      F EI+         V   + ++ R +  + +  +Y+++
Sbjct: 69  VSELIHNSTDHHNLDSAEVSVYFQEILDLEDGTHKAVSGRDFKITR-VAFRDNSSKYYIN 127

Query: 113 GKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMK-------DSERLDLLKEIGGT 165
                 TEV N L+  G    N  +++ QG++  ++LMK       D   L+ L++I GT
Sbjct: 128 NISSNFTEVTNKLKEKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIAGT 187

Query: 166 RVYEERRRESLKIMQETGNKRKQIIQVVQ 194
           + Y E+  ES K ++    +R  ++Q+V+
Sbjct: 188 KKYVEKIDESYKQLEFLNERRSGVVQMVK 216


>Medtr0003s0460.1 | structural maintenance of chromosomes protein |
           HC | scaffold0003:229552-233442 | 20130731
          Length = 1208

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 17/197 (8%)

Query: 3   IKQIVIEGFKSYREQIATETFSP--KVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED 60
           I ++ IE FKSY+    ++   P      ++G NG+GK+N   AI FVL     +LR   
Sbjct: 6   IHRLEIENFKSYK---GSQIIGPFAGFTAIIGPNGAGKSNLMDAICFVLGVRTFHLRGSQ 62

Query: 61  RHALLHEGAGHQV--LSAFVEIVFDNSDNRIPVDKEEVRLRRTI-GLKKDEYFLDGKHIT 117
              L+++ +  Q    SA V +++         DK E++  RTI      +YF+D   +T
Sbjct: 63  LTDLIYDDSEKQKNERSALVRLIYQ------LADKSEIQFARTITATGASQYFIDDNVVT 116

Query: 118 KTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLK 177
                  L S         ++V QG + S+      E   L ++I G+  +   +RE  K
Sbjct: 117 WDVYNAKLISLDILVKARNFLVFQGYVESIASKNPKELTLLFEQISGSDQF---KREYDK 173

Query: 178 IMQETGNKRKQIIQVVQ 194
           +  E  +  +++  V Q
Sbjct: 174 LEDEKNSAEEKMALVYQ 190


>Medtr5g086975.1 | hypothetical protein | LC |
           chr5:37630389-37633545 | 20130731
          Length = 294

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/28 (78%), Positives = 26/28 (92%)

Query: 240 IEIEEARNKVSETSSKMYNDVLDAHEKS 267
           +E+EEAR KVSE S+KMYN+VLDAHEKS
Sbjct: 57  LELEEARTKVSEVSAKMYNEVLDAHEKS 84