Miyakogusa Predicted Gene

Lj2g3v2904560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2904560.1 Non Characterized Hit- tr|G7J6P6|G7J6P6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,66.67,0.0000000000002,seg,NULL,CUFF.39443.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g080060.1 | Clavata3/ESR (CLE) gene family member MtCLE23 ...    76   8e-15
Medtr5g085990.1 | Clavata3/ESR (CLE) gene family member MtCLE17 ...    62   2e-10

>Medtr3g080060.1 | Clavata3/ESR (CLE) gene family member MtCLE23 |
          HC | chr3:36207269-36207546 | 20130731
          Length = 72

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 1/51 (1%)

Query: 27 YAIRIKFSAPSRQQEAFFHPFANSPISSRGGDFMSEKRRVPTGSNPLHNKR 77
          Y  R KFS PS QQ+AF H +ANSPISSRG +F S+KRRVPTG+NPLHNK+
Sbjct: 23 YTTRTKFSGPSTQQQAF-HRWANSPISSRGKEFESQKRRVPTGANPLHNKK 72


>Medtr5g085990.1 | Clavata3/ESR (CLE) gene family member MtCLE17 |
          HC | chr5:37177432-37176480 | 20130731
          Length = 72

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 41/54 (75%), Gaps = 2/54 (3%)

Query: 26 VYAIRIKFSAPSRQ--QEAFFHPFANSPISSRGGDFMSEKRRVPTGSNPLHNKR 77
          VYAIRIKFS+PS      AF  PF NSP  S+G +F S+KR+VPTGSNPLHNKR
Sbjct: 19 VYAIRIKFSSPSSTSSHHAFHIPFFNSPSRSKGKEFKSQKRKVPTGSNPLHNKR 72