Miyakogusa Predicted Gene

Lj2g3v2902520.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2902520.2 tr|G7JAE3|G7JAE3_MEDTR Neurochondrin OS=Medicago
truncatula GN=MTR_3g106410 PE=4 SV=1,74.51,0.0000000000003,
,CUFF.39488.2
         (100 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g106410.1 | neurochondrin protein | HC | chr3:49176740-491...    80   4e-16
Medtr3g106410.2 | neurochondrin protein | HC | chr3:49176740-491...    80   5e-16

>Medtr3g106410.1 | neurochondrin protein | HC |
           chr3:49176740-49185818 | 20130731
          Length = 620

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 47/51 (92%)

Query: 11  SKGIKILASQMSSVQDGSHLVEISVKLLQLILRRISLDTIQNNYLAELSVI 61
           S+GIKI ASQ+ S++DGSHLVEIS+KLLQ +L RISLDTIQN+YL+ELSVI
Sbjct: 148 SRGIKIAASQLPSMEDGSHLVEISIKLLQSVLSRISLDTIQNDYLSELSVI 198


>Medtr3g106410.2 | neurochondrin protein | HC |
           chr3:49176740-49182193 | 20130731
          Length = 435

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 47/51 (92%)

Query: 11  SKGIKILASQMSSVQDGSHLVEISVKLLQLILRRISLDTIQNNYLAELSVI 61
           S+GIKI ASQ+ S++DGSHLVEIS+KLLQ +L RISLDTIQN+YL+ELSVI
Sbjct: 148 SRGIKIAASQLPSMEDGSHLVEISIKLLQSVLSRISLDTIQNDYLSELSVI 198