Miyakogusa Predicted Gene
- Lj2g3v2902400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2902400.1 Non Characterized Hit- tr|F6GZL7|F6GZL7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,56.98,2e-19,no
description,NULL; Nucleotide-diphospho-sugar transferases,NULL;
BETA-1,3-GLUCURONYLTRANSFERASE,NU,CUFF.39428.1
(101 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC | c... 100 2e-22
Medtr3g110142.3 | beta-1,4-xylosyltransferase, putative | HC | c... 67 4e-12
Medtr3g110142.2 | beta-1,4-xylosyltransferase, putative | HC | c... 67 4e-12
Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC | c... 67 4e-12
Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC | c... 67 4e-12
>Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC |
chr3:51891978-51896004 | 20130731
Length = 441
Score = 100 bits (250), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 2 KHFVIDPVV---SLSAEKQSQSLVA-----VERFDFVLRKLLVVVTPTYNCGSQSYFLNR 53
K F+I+ V +++AEK +++L E+ D V RK L++VTPTYN QSYFLNR
Sbjct: 149 KGFMIEQVSLSSNMNAEKDNENLKERELGESEKIDIVARKQLIIVTPTYNRSFQSYFLNR 208
Query: 54 LGQVLRLVSPPVLWVVVETKAASLETAEVLRKT 86
LGQVLRLV PP+LWVVVE +AS+ETAE+LRKT
Sbjct: 209 LGQVLRLVPPPLLWVVVEMNSASMETAELLRKT 241
>Medtr3g110142.3 | beta-1,4-xylosyltransferase, putative | HC |
chr3:51104211-51107592 | 20130731
Length = 394
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 32 RKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKT 86
+KL ++VTPTYN Q+Y+L+ L Q L+LVSPP+LW+VVE + S ETA++L +
Sbjct: 181 QKLFIIVTPTYNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSS 235
>Medtr3g110142.2 | beta-1,4-xylosyltransferase, putative | HC |
chr3:51104211-51107592 | 20130731
Length = 394
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 32 RKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKT 86
+KL ++VTPTYN Q+Y+L+ L Q L+LVSPP+LW+VVE + S ETA++L +
Sbjct: 181 QKLFIIVTPTYNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSS 235
>Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC |
chr3:51104209-51107598 | 20130731
Length = 438
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 32 RKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKT 86
+KL ++VTPTYN Q+Y+L+ L Q L+LVSPP+LW+VVE + S ETA++L +
Sbjct: 181 QKLFIIVTPTYNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSS 235
>Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC |
chr3:51104209-51107598 | 20130731
Length = 438
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 32 RKLLVVVTPTYNCGSQSYFLNRLGQVLRLVSPPVLWVVVETKAASLETAEVLRKT 86
+KL ++VTPTYN Q+Y+L+ L Q L+LVSPP+LW+VVE + S ETA++L +
Sbjct: 181 QKLFIIVTPTYNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSS 235