Miyakogusa Predicted Gene

Lj2g3v2902280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2902280.1 Non Characterized Hit- tr|I1KDW0|I1KDW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15153 PE,37.74,3e-18,
,CUFF.39415.1
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g078290.1 | cyclin-dependent kinase | HC | chr4:30155456-3...   291   2e-79
Medtr4g078290.2 | cyclin-dependent kinase | HC | chr4:30155456-3...   290   7e-79
Medtr2g090405.1 | cyclin-dependent kinase | HC | chr2:38536819-3...   176   1e-44
Medtr2g090405.2 | cyclin-dependent kinase | HC | chr2:38537160-3...   176   1e-44
Medtr2g085200.1 | cyclin-dependent kinase | HC | chr2:33272849-3...   102   2e-22

>Medtr4g078290.1 | cyclin-dependent kinase | HC |
           chr4:30155456-30159988 | 20130731
          Length = 686

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/215 (73%), Positives = 173/215 (80%), Gaps = 12/215 (5%)

Query: 4   QAQRHSSSNHRSELSYPHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLVPG 63
           Q + +S + +RSELSYPHR  VSG  G  HKQS+DVKE  NN SGH + RPSHSGPLVPG
Sbjct: 483 QQKHYSITKNRSELSYPHREHVSGTQGYPHKQSKDVKETENNLSGHFYNRPSHSGPLVPG 542

Query: 64  YGWAKGAKEVDDGPPVSNRVNLSKLSGLVASRTSLPEDQGEKPA-HLHHRKPVEVRKSVE 122
            GWA+GAKEVD+GP VSNRVNLSKLSGLVASRT L EDQ  KP     +RK +EVRKSVE
Sbjct: 543 SGWARGAKEVDNGPTVSNRVNLSKLSGLVASRTLLSEDQEPKPVPSFPYRKSIEVRKSVE 602

Query: 123 ATSGSESRRRHDQKRIVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLVSSNNM 182
           AT+GSESRRR D+KRIVDQSQI NRRVP EKSTPDG GSS   GNKIYMSGPLL +SNNM
Sbjct: 603 ATNGSESRRRRDKKRIVDQSQIVNRRVPTEKSTPDGHGSS---GNKIYMSGPLL-ASNNM 658

Query: 183 DQMLKEHDRKIQEFSRRARIDKSRTKGEKVRAQRK 217
           DQMLK+HDRKIQEFSRRAR       G+KVRAQRK
Sbjct: 659 DQMLKDHDRKIQEFSRRAR-------GDKVRAQRK 686


>Medtr4g078290.2 | cyclin-dependent kinase | HC |
           chr4:30155456-30159995 | 20130731
          Length = 685

 Score =  290 bits (742), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 173/214 (80%), Gaps = 13/214 (6%)

Query: 6   QRHSS-SNHRSELSYPHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLVPGY 64
           Q+H S + +RSELSYPHR  VSG  G  HKQS+DVKE  NN SGH + RPSHSGPLVPG 
Sbjct: 483 QKHYSITKNRSELSYPHREHVSGTQGYPHKQSKDVKETENNLSGHFYNRPSHSGPLVPGS 542

Query: 65  GWAKGAKEVDDGPPVSNRVNLSKLSGLVASRTSLPEDQGEKPA-HLHHRKPVEVRKSVEA 123
           GWA+GAKEVD+GP VSNRVNLSKLSGLVASRT L EDQ  KP     +RK +EVRKSVEA
Sbjct: 543 GWARGAKEVDNGPTVSNRVNLSKLSGLVASRTLLSEDQEPKPVPSFPYRKSIEVRKSVEA 602

Query: 124 TSGSESRRRHDQKRIVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLVSSNNMD 183
           T+GSESRRR D+KRIVDQSQI NRRVP EKSTPDG GSS   GNKIYMSGPLL +SNNMD
Sbjct: 603 TNGSESRRRRDKKRIVDQSQIVNRRVPTEKSTPDGHGSS---GNKIYMSGPLL-ASNNMD 658

Query: 184 QMLKEHDRKIQEFSRRARIDKSRTKGEKVRAQRK 217
           QMLK+HDRKIQEFSRRAR       G+KVRAQRK
Sbjct: 659 QMLKDHDRKIQEFSRRAR-------GDKVRAQRK 685


>Medtr2g090405.1 | cyclin-dependent kinase | HC |
           chr2:38536819-38541654 | 20130731
          Length = 683

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/205 (51%), Positives = 129/205 (62%), Gaps = 20/205 (9%)

Query: 2   LQQAQRHSSSNHRSELSYPHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLV 61
           +QQ Q   +   R+E   PHR P SGF+ + HKQSEDVKE  N  SG L+ R SHSG LV
Sbjct: 494 MQQGQHFPNMTSRNESFNPHREPASGFMVLPHKQSEDVKETANYFSGPLYPRSSHSGLLV 553

Query: 62  PGYGWAKGAKEVDDGP-PVSNRVNLSKLSGLVASRTSLPEDQGEKPAHLHHRKPVEVRKS 120
           PG G  K  KE  + P PVS + NLSK      SRTS   +Q E PA    +  ++V+KS
Sbjct: 554 PGSGRHKIGKEASERPLPVSTKANLSK-----PSRTSFSGNQKENPAPWRPQDTIQVQKS 608

Query: 121 VEATSGSESRRRHDQKR---IVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLV 177
              +SGSESR+RHD+KR   I D SQ +N           G+  + S GN +YMSGPLLV
Sbjct: 609 FGLSSGSESRKRHDKKRHSKIADLSQTEN-----------GKDGNVSSGNNLYMSGPLLV 657

Query: 178 SSNNMDQMLKEHDRKIQEFSRRARI 202
           SSNNMDQMLKE D+K+QE+SRRARI
Sbjct: 658 SSNNMDQMLKERDKKLQEYSRRARI 682


>Medtr2g090405.2 | cyclin-dependent kinase | HC |
           chr2:38537160-38541654 | 20130731
          Length = 683

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/205 (51%), Positives = 129/205 (62%), Gaps = 20/205 (9%)

Query: 2   LQQAQRHSSSNHRSELSYPHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLV 61
           +QQ Q   +   R+E   PHR P SGF+ + HKQSEDVKE  N  SG L+ R SHSG LV
Sbjct: 494 MQQGQHFPNMTSRNESFNPHREPASGFMVLPHKQSEDVKETANYFSGPLYPRSSHSGLLV 553

Query: 62  PGYGWAKGAKEVDDGP-PVSNRVNLSKLSGLVASRTSLPEDQGEKPAHLHHRKPVEVRKS 120
           PG G  K  KE  + P PVS + NLSK      SRTS   +Q E PA    +  ++V+KS
Sbjct: 554 PGSGRHKIGKEASERPLPVSTKANLSK-----PSRTSFSGNQKENPAPWRPQDTIQVQKS 608

Query: 121 VEATSGSESRRRHDQKR---IVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLV 177
              +SGSESR+RHD+KR   I D SQ +N           G+  + S GN +YMSGPLLV
Sbjct: 609 FGLSSGSESRKRHDKKRHSKIADLSQTEN-----------GKDGNVSSGNNLYMSGPLLV 657

Query: 178 SSNNMDQMLKEHDRKIQEFSRRARI 202
           SSNNMDQMLKE D+K+QE+SRRARI
Sbjct: 658 SSNNMDQMLKERDKKLQEYSRRARI 682


>Medtr2g085200.1 | cyclin-dependent kinase | HC |
           chr2:33272849-33266613 | 20130731
          Length = 712

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 2   LQQAQRHSSSNHRSELSYPHRGPVSGFLGVAHKQSEDVKEMGNNSSGHLFKRPSHSGPLV 61
           +Q+ Q  + S  RSE   PH         +   +     E   +   +  KR SHSGPL 
Sbjct: 487 MQKRQGQNYSQSRSEKFNPHPEDAGSGFPIEPPRPSQAAEANVDPQANQHKRASHSGPLT 546

Query: 62  PGYGWAKGAKEVDDGPPVSNRVNLSKLSGLVASRTS-LPEDQGEKPAHLHHRKPVEVRK- 119
               WAK  K  DD P +S   +LS +SGLVA+R S L +D+ E         P  + + 
Sbjct: 547 HRAAWAKAGKNQDDAPKISVGGDLSTMSGLVAARRSMLSDDRRESSGSSQVEAPKLITRF 606

Query: 120 --SVEATSGSESRRRHDQKRIVDQSQIDNRRVPAEKSTPDGRGSSASGGNKIYMSGPLLV 177
             S +  S S  ++  +QK  V  SQ ++ +   +     G GS    G KI+ SGPLLV
Sbjct: 607 PGSFKEASESLMQQNQNQKHHVHASQKEDAKGSNKDPNNVGYGSK---GYKIHYSGPLLV 663

Query: 178 SSNNMDQMLKEHDRKIQEFSRRARIDKSRTK 208
            S+NMDQMLK+HDR+IQE  RRAR+DK++ +
Sbjct: 664 PSSNMDQMLKDHDRQIQEAVRRARLDKAKMR 694