Miyakogusa Predicted Gene

Lj2g3v2901270.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2901270.3 Non Characterized Hit- tr|C6TFA8|C6TFA8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38214
PE,51.69,0.00000000000004,seg,NULL; E1_DerP2_DerF2,MD-2-related
lipid-recognition; no description,NULL; E set
domains,Immunogl,CUFF.39464.3
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g085900.1 | MD-like lipid recognition domain protein/ML do...   110   3e-25
Medtr4g050400.1 | leguminosin group578 secreted peptide | HC | c...    74   2e-14
Medtr1g055435.1 | MD-like lipid recognition domain protein/ML do...    61   3e-10
Medtr1g055425.1 | MD-like lipid recognition domain protein/ML do...    58   2e-09

>Medtr5g085900.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr5:37125563-37128450 | 20130731
          Length = 162

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 59/68 (86%)

Query: 41  KYCDKNADYAVKVSGVEILPDPVVRGVPFTFKIAAYTGEPIPSGDLLYEISYAGIEGEPA 100
           KYC+K A+YAV++S VEILP+PVVRG PFTFKI AYTGEPI SGDL+YEIS+AGIEG+PA
Sbjct: 35  KYCEKGANYAVQISNVEILPNPVVRGEPFTFKIKAYTGEPILSGDLIYEISFAGIEGQPA 94

Query: 101 TFLHDLCE 108
            F H L E
Sbjct: 95  IFHHALSE 102


>Medtr4g050400.1 | leguminosin group578 secreted peptide | HC |
           chr4:17844530-17842530 | 20130731
          Length = 155

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)

Query: 41  KYCDKNADYAVKVSGVEILPDPVVRGVPFTFKIAAYTGEPIPSGDLLYEISYAGIEGEPA 100
           KYCDK ADY VKV+G+EILP+PVV G P TFKI+A +G+ +  GD++  +SY G+     
Sbjct: 29  KYCDKKADYPVKVTGIEILPNPVVSGAPATFKISATSGKALYGGDVVIGVSYVGVPVHSE 88

Query: 101 TFLHDLCE 108
           T   DLC+
Sbjct: 89  TI--DLCK 94


>Medtr1g055435.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24562031-24565237 | 20130731
          Length = 156

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 42  YCDKNADYAVKVSGVEILPDPVVRGVPFTFKIAAYTGEPIPSGDLLYEISYAGIEGEPAT 101
           YC K   Y V+V GV+I PDPV RG P TF I+A T + +  G L+ ++SY G      T
Sbjct: 32  YCGKKDSYDVQVKGVQISPDPVARGQPATFTISANTSQALSEGKLVVDVSYFGWHVYSET 91

Query: 102 FLHDLC 107
             HDLC
Sbjct: 92  --HDLC 95


>Medtr1g055425.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24551966-24554982 | 20130731
          Length = 155

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 42  YCDKNADYAVKVSGVEILPDPVVRGVPFTFKIAAYTGEPIPSGDLLYEISYAGIEGEPAT 101
           YCDK A Y ++V  V+I PDP+ RG P TF I+A T + +  G +L ++SY G      T
Sbjct: 31  YCDKKASYDIEVKEVQISPDPIARGRPATFTISATTNQTLSGGKVLIDVSYFGWHVYSET 90

Query: 102 FLHDLC 107
              DLC
Sbjct: 91  --KDLC 94