Miyakogusa Predicted Gene
- Lj2g3v2877210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2877210.1 Non Characterized Hit- tr|I1R036|I1R036_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,51.25,3e-18,no
description,NULL; seg,NULL; zf-CCCH,Zinc finger, CCCH-type; ZINC
FINGER CCCH DOMAIN-CONTAINING PR,CUFF.39378.1
(263 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g085200.1 | zinc finger CCCH domain protein | HC | chr5:36... 363 e-101
Medtr5g085200.2 | zinc finger CCCH domain protein | HC | chr5:36... 363 e-101
Medtr7g079840.1 | zinc finger CCCH domain protein | HC | chr7:30... 137 8e-33
Medtr7g079840.2 | zinc finger CCCH domain protein | HC | chr7:30... 137 9e-33
Medtr7g079840.3 | zinc finger CCCH domain protein | HC | chr7:30... 137 9e-33
Medtr7g079840.4 | zinc finger CCCH domain protein | HC | chr7:30... 137 9e-33
Medtr3g075190.1 | zinc finger CCCH domain protein | HC | chr3:34... 123 1e-28
Medtr4g104260.1 | zinc finger C-x8-C-x5-C-x3-H type family prote... 122 3e-28
Medtr4g119280.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 100 1e-21
Medtr8g446930.2 | zinc finger CCCH domain protein | HC | chr8:18... 100 2e-21
Medtr8g446930.1 | zinc finger CCCH domain protein | HC | chr8:18... 100 2e-21
Medtr1g088875.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 91 1e-18
Medtr1g088875.2 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 91 1e-18
Medtr1g088875.3 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 91 1e-18
Medtr2g019740.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 91 2e-18
Medtr4g119280.2 | zinc finger C-x8-C-x5-C-x3-H type protein | HC... 84 1e-16
>Medtr5g085200.1 | zinc finger CCCH domain protein | HC |
chr5:36776743-36772884 | 20130731
Length = 422
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/252 (72%), Positives = 207/252 (82%), Gaps = 5/252 (1%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFG-AYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYL 59
MRTGSCKFG ACKFHHPQQ ASFG AY +A SP ST + +S PY G FPAWS+PRMSYL
Sbjct: 144 MRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYL 203
Query: 60 SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNP-GESLSGG 118
SGQ I+PA SW+ YMGS+NPAMP+ F GSNLVY+YMNP GE+LSGG
Sbjct: 204 SGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETLSGG 263
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL-INPLGLPVRPGQAIC 177
QA++S+LPDRP+QP+CKYFMSTGTCKYGSDCKFHHPKER+AQ+L INPLGLP+RPG AIC
Sbjct: 264 QAMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAIC 323
Query: 178 SYYRIYGICKFGPTCKFDHPVVAIPQNYGMTSPSLSVLDASSLMSNPRGFSSTVQLTETS 237
SYYRIYG+CKFGPTCKFDHPVVAI QNYG+ SP+LSV DA SL++NPR STVQ ETS
Sbjct: 324 SYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDA-SLLTNPRRL-STVQPAETS 381
Query: 238 PPKLSSDKLQQN 249
P K S+DKLQQ+
Sbjct: 382 PSKQSTDKLQQS 393
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--V 158
GSN Y N ++S LP+R QP+C+YF+ TGTCKYGS CK+HHPK+R
Sbjct: 65 GSNCRY---NHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGA 121
Query: 159 AQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVA 200
A + N LGLP+R + C YY G CKFG CKF HP A
Sbjct: 122 APVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQA 163
>Medtr5g085200.2 | zinc finger CCCH domain protein | HC |
chr5:36776743-36772884 | 20130731
Length = 422
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/252 (72%), Positives = 207/252 (82%), Gaps = 5/252 (1%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFG-AYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYL 59
MRTGSCKFG ACKFHHPQQ ASFG AY +A SP ST + +S PY G FPAWS+PRMSYL
Sbjct: 144 MRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTTVTSSGFPYAGGFPAWSMPRMSYL 203
Query: 60 SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNP-GESLSGG 118
SGQ I+PA SW+ YMGS+NPAMP+ F GSNLVY+YMNP GE+LSGG
Sbjct: 204 SGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIGSNLVYDYMNPAGETLSGG 263
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL-INPLGLPVRPGQAIC 177
QA++S+LPDRP+QP+CKYFMSTGTCKYGSDCKFHHPKER+AQ+L INPLGLP+RPG AIC
Sbjct: 264 QAMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAIC 323
Query: 178 SYYRIYGICKFGPTCKFDHPVVAIPQNYGMTSPSLSVLDASSLMSNPRGFSSTVQLTETS 237
SYYRIYG+CKFGPTCKFDHPVVAI QNYG+ SP+LSV DA SL++NPR STVQ ETS
Sbjct: 324 SYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDA-SLLTNPRRL-STVQPAETS 381
Query: 238 PPKLSSDKLQQN 249
P K S+DKLQQ+
Sbjct: 382 PSKQSTDKLQQS 393
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER--V 158
GSN Y N ++S LP+R QP+C+YF+ TGTCKYGS CK+HHPK+R
Sbjct: 65 GSNCRY---NHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRGA 121
Query: 159 AQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVA 200
A + N LGLP+R + C YY G CKFG CKF HP A
Sbjct: 122 APVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQA 163
>Medtr7g079840.1 | zinc finger CCCH domain protein | HC |
chr7:30331631-30324378 | 20130731
Length = 418
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTII----PASSLPYVGAFPAWSVPRM 56
+RTG CKFG CKFHHPQ S + GSP + A Y WS
Sbjct: 131 LRTGQCKFGNTCKFHHPQ--PSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNWST--S 186
Query: 57 SYL-SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESL 115
SY+ S + +V W+TY G M P ++ Y + G+
Sbjct: 187 SYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSHQGDPE 246
Query: 116 SGG-QALSS------------------TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE 156
+ G Q + S P+RPDQPEC+++M TG CK+G+ C+FHHP+E
Sbjct: 247 NAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRE 306
Query: 157 RVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
R +++PLGLP+RPG+ +C +Y YGICKFGP+CKFDHP+
Sbjct: 307 RTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINPLGLPVRPGQAIC 177
+ P+R QPEC+Y++ TGTCK+G+ C+FHHPK++ + +N LG P+RP ++ C
Sbjct: 68 MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESEC 127
Query: 178 SYYRIYGICKFGPTCKFDHP 197
+YY G CKFG TCKF HP
Sbjct: 128 AYYLRTGQCKFGNTCKFHHP 147
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER-VAQSLINPLG 167
+ P E++ G P+ P +P+C Y++ TG C++G+ C+F+HP R +A + G
Sbjct: 16 LRPSETMESG-----PYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG 70
Query: 168 -LPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C YY G CKFG TC+F HP
Sbjct: 71 EFPERLGQPECQYYLKTGTCKFGATCRFHHP 101
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL-GLPVRP 172
P RP++ EC Y++ TG CK+G+ CKFHHP+ +++ P+ G PV P
Sbjct: 119 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ---PSNMVLPMRGSPVYP 163
>Medtr7g079840.2 | zinc finger CCCH domain protein | HC |
chr7:30331631-30324378 | 20130731
Length = 408
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTII----PASSLPYVGAFPAWSVPRM 56
+RTG CKFG CKFHHPQ S + GSP + A Y WS
Sbjct: 121 LRTGQCKFGNTCKFHHPQ--PSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNWST--S 176
Query: 57 SYL-SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESL 115
SY+ S + +V W+TY G M P ++ Y + G+
Sbjct: 177 SYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSHQGDPE 236
Query: 116 SGG-QALSS------------------TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE 156
+ G Q + S P+RPDQPEC+++M TG CK+G+ C+FHHP+E
Sbjct: 237 NAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRE 296
Query: 157 RVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
R +++PLGLP+RPG+ +C +Y YGICKFGP+CKFDHP+
Sbjct: 297 RTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINPLGLPVRPGQAIC 177
+ P+R QPEC+Y++ TGTCK+G+ C+FHHPK++ + +N LG P+RP ++ C
Sbjct: 58 MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESEC 117
Query: 178 SYYRIYGICKFGPTCKFDHP 197
+YY G CKFG TCKF HP
Sbjct: 118 AYYLRTGQCKFGNTCKFHHP 137
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER-VAQSLINPLG 167
+ P E++ G P+ P +P+C Y++ TG C++G+ C+F+HP R +A + G
Sbjct: 6 LRPSETMESG-----PYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG 60
Query: 168 -LPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C YY G CKFG TC+F HP
Sbjct: 61 EFPERLGQPECQYYLKTGTCKFGATCRFHHP 91
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL-GLPVRP 172
P RP++ EC Y++ TG CK+G+ CKFHHP+ +++ P+ G PV P
Sbjct: 109 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ---PSNMVLPMRGSPVYP 153
>Medtr7g079840.3 | zinc finger CCCH domain protein | HC |
chr7:30331631-30324378 | 20130731
Length = 408
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTII----PASSLPYVGAFPAWSVPRM 56
+RTG CKFG CKFHHPQ S + GSP + A Y WS
Sbjct: 121 LRTGQCKFGNTCKFHHPQ--PSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNWST--S 176
Query: 57 SYL-SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESL 115
SY+ S + +V W+TY G M P ++ Y + G+
Sbjct: 177 SYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSHQGDPE 236
Query: 116 SGG-QALSS------------------TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE 156
+ G Q + S P+RPDQPEC+++M TG CK+G+ C+FHHP+E
Sbjct: 237 NAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRE 296
Query: 157 RVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
R +++PLGLP+RPG+ +C +Y YGICKFGP+CKFDHP+
Sbjct: 297 RTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINPLGLPVRPGQAIC 177
+ P+R QPEC+Y++ TGTCK+G+ C+FHHPK++ + +N LG P+RP ++ C
Sbjct: 58 MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESEC 117
Query: 178 SYYRIYGICKFGPTCKFDHP 197
+YY G CKFG TCKF HP
Sbjct: 118 AYYLRTGQCKFGNTCKFHHP 137
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER-VAQSLINPLG 167
+ P E++ G P+ P +P+C Y++ TG C++G+ C+F+HP R +A + G
Sbjct: 6 LRPSETMESG-----PYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG 60
Query: 168 -LPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C YY G CKFG TC+F HP
Sbjct: 61 EFPERLGQPECQYYLKTGTCKFGATCRFHHP 91
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL-GLPVRP 172
P RP++ EC Y++ TG CK+G+ CKFHHP+ +++ P+ G PV P
Sbjct: 109 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ---PSNMVLPMRGSPVYP 153
>Medtr7g079840.4 | zinc finger CCCH domain protein | HC |
chr7:30330503-30324378 | 20130731
Length = 408
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTII----PASSLPYVGAFPAWSVPRM 56
+RTG CKFG CKFHHPQ S + GSP + A Y WS
Sbjct: 121 LRTGQCKFGNTCKFHHPQ--PSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNWST--S 176
Query: 57 SYL-SGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESL 115
SY+ S + +V W+TY G M P ++ Y + G+
Sbjct: 177 SYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSHQGDPE 236
Query: 116 SGG-QALSS------------------TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE 156
+ G Q + S P+RPDQPEC+++M TG CK+G+ C+FHHP+E
Sbjct: 237 NAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRE 296
Query: 157 RVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
R +++PLGLP+RPG+ +C +Y YGICKFGP+CKFDHP+
Sbjct: 297 RTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER---VAQSLINPLGLPVRPGQAIC 177
+ P+R QPEC+Y++ TGTCK+G+ C+FHHPK++ + +N LG P+RP ++ C
Sbjct: 58 MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESEC 117
Query: 178 SYYRIYGICKFGPTCKFDHP 197
+YY G CKFG TCKF HP
Sbjct: 118 AYYLRTGQCKFGNTCKFHHP 137
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 109 MNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKER-VAQSLINPLG 167
+ P E++ G P+ P +P+C Y++ TG C++G+ C+F+HP R +A + G
Sbjct: 6 LRPSETMESG-----PYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG 60
Query: 168 -LPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
P R GQ C YY G CKFG TC+F HP
Sbjct: 61 EFPERLGQPECQYYLKTGTCKFGATCRFHHP 91
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL-GLPVRP 172
P RP++ EC Y++ TG CK+G+ CKFHHP+ +++ P+ G PV P
Sbjct: 109 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ---PSNMVLPMRGSPVYP 153
>Medtr3g075190.1 | zinc finger CCCH domain protein | HC |
chr3:34208143-34204008 | 20130731
Length = 511
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
MRTGSCKFGA CKF+HP + G S AG + + + P WS R
Sbjct: 277 MRTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVSQ-SSTPPWSSTRKF--- 332
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMG-------SMNPAMPSSFPGSNLVYEYMNPGE 113
+ + WN Y SM+P P Y NP
Sbjct: 333 NETAPFVPIIISPTPGASPRSSDWNGYQAPFYLSERSMHPPSP---------YAVNNPAM 383
Query: 114 SLSG-----GQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ---SLINP 165
++ P+RP +PEC +F+ TG CK+ S CKFHHPK R+ + ++
Sbjct: 384 EMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSD 443
Query: 166 LGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
GLP+RPGQ +C++Y YGICKFGP CK+DHP+
Sbjct: 444 KGLPLRPGQNVCTHYSRYGICKFGPACKYDHPI 476
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLI---NPLGLPVRPGQAICSYYR 181
L +R Q ECKY+ +G CK+G DCKF H + + + + N LGLP+R G+ C YY
Sbjct: 218 LEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLELNFLGLPIRLGEKECPYYM 277
Query: 182 IYGICKFGPTCKFDHP----VVAIPQNYGMTSPSLSVLDASSLMSNPRGFSSTVQLTETS 237
G CKFG CKF+HP V G + S + L S S P +SST + ET+
Sbjct: 278 RTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVSQSSTPP-WSSTRKFNETA 336
Query: 238 P 238
P
Sbjct: 337 P 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLG----LPVRPGQAICSYYR 181
P RP+ +C +++ TGTCK+G +CKF+HP R Q G L R Q C YY
Sbjct: 172 PLRPEAEDCSFYLKTGTCKFGFNCKFNHPLGRRNQVFRERAGERDELEERSSQTECKYYS 231
Query: 182 IYGICKFGPTCKFDH 196
G CKFG CKFDH
Sbjct: 232 RSGGCKFGKDCKFDH 246
>Medtr4g104260.1 | zinc finger C-x8-C-x5-C-x3-H type family protein
| HC | chr4:43094920-43090696 | 20130731
Length = 573
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 107/216 (49%), Gaps = 28/216 (12%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFP--AWSVPRMSY 58
MRTGSCKFG+ C+F+HP G+ +G + SL V P +WS +++
Sbjct: 337 MRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSV---SLRGVSQQPVASWSSRKLN- 392
Query: 59 LSGQXXXXXXXXXXXXXXXIVPAQS-WNTYMGSMNPAMPSSFPGSNLVYE--------YM 109
+ P S WN Y + P S V YM
Sbjct: 393 -----ETPFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIDTNVYM 447
Query: 110 NPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ---SLINPL 166
+ + Q P+RP +PEC +F+ TG CK+ S+CKFHHPK RVA+ ++
Sbjct: 448 HHQK-----QMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDK 502
Query: 167 GLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIP 202
GLP+RP Q++CS+Y YGICKFGP C+FDHP A+P
Sbjct: 503 GLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALP 538
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 107 EYMNPGESLSGGQALSSTLPDRPD------QPECKYFMSTGTCKYGSDCKFHHPKERVA- 159
++ +P + QA+ + +R + Q ECKY+ +G CK+G CK++H + A
Sbjct: 256 KFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAP 315
Query: 160 QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
S +N LGLP+R G+ C YY G CKFG C+F+HP
Sbjct: 316 ISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHP 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 125 LPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRP------GQAICS 178
P RP+ +C ++M TG+CK+G +CKF+HP R Q+ + R GQ C
Sbjct: 231 FPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECK 290
Query: 179 YYRIYGICKFGPTCKFDH 196
YY+ G CKFG CK++H
Sbjct: 291 YYQRSGGCKFGKACKYNH 308
>Medtr4g119280.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr4:49394887-49390580 | 20130731
Length = 511
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 80 PAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMS 139
P QS G + PS+ P Y+ P SG +LP+RPDQ EC+++M
Sbjct: 290 PYQSSGPSAGPYQSSGPSAGP-----YQSSGPSTGPSGSSQKEHSLPERPDQQECQHYMK 344
Query: 140 TGTCKYGSDCKFHHPKERVAQSL-INPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPV 198
TG CK+GS C++HHP + A + ++P+GLP+RPG C++Y G CKFG CKFDHP
Sbjct: 345 TGDCKFGSTCRYHHPPDMGAPKVNLSPIGLPLRPGAQPCTHYTQRGFCKFGSACKFDHPT 404
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ 160
GS + + ++ G ++ P+R QP C+Y+ TG+CK+G+ CK+HHP++
Sbjct: 64 GSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGT 123
Query: 161 S---LINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVA 200
+ +N G P+R G+ CSYY G CKFG TCKF HP A
Sbjct: 124 TPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPA 166
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 124 TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGL----PVRPGQAICSY 179
+ P RPD+ +C Y++ TG C YGS C+F+HP++R A +I + P R GQ +C Y
Sbjct: 42 SYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGA--VIGAARIAGEYPERVGQPVCQY 99
Query: 180 YRIYGICKFGPTCKFDHPVVA 200
Y G CKFG +CK+ HP A
Sbjct: 100 YARTGSCKFGASCKYHHPRQA 120
>Medtr8g446930.2 | zinc finger CCCH domain protein | HC |
chr8:18375329-18366338 | 20130731
Length = 362
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 62/206 (30%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
M+TGSCKFGA+C+++HP +A P S + P+
Sbjct: 172 MKTGSCKFGASCRYNHPDMNA-------INPPVSALGPS--------------------- 203
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES--LSGG 118
++ + + N MG++NPA +SF Y+ +P S +S
Sbjct: 204 -----------------VLASSTANLNMGAINPA--ASF------YQAFDPSLSNPMSQV 238
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERV-------AQSLINPLGLPVR 171
+ P RP Q EC ++M +G CK+G CK+HHP +R + + GLP R
Sbjct: 239 GVTGTIYPQRPGQIECDFYMKSGICKFGERCKYHHPIDRTTSLSKLQSNVKLTAAGLPRR 298
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHP 197
G IC YY CKFG TCKFDHP
Sbjct: 299 EGVEICPYYLKTATCKFGATCKFDHP 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 41/135 (30%)
Query: 123 STLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE-----------RVAQS---------- 161
S LP+RP +P C +++ TG CKYG+ CKFHHPK+ V Q+
Sbjct: 79 SGLPERPQEPPCAFYLKTGKCKYGAACKFHHPKDIQIQLSDDLSRTVEQTQTNSSVFDGA 138
Query: 162 ---------LINPL-----GLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIPQNYGM 207
LI+PL GLPVRP + C +Y G CKFG +C+++HP +
Sbjct: 139 IGDTQSIMPLISPLSHNSKGLPVRPREVDCPFYMKTGSCKFGASCRYNHP------DMNA 192
Query: 208 TSPSLSVLDASSLMS 222
+P +S L S L S
Sbjct: 193 INPPVSALGPSVLAS 207
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 122 SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGLPVRPGQAICSYYR 181
S TLP+RP +P+C +F+ T CK+G+ CKF+HP ++ GLP RP + C++Y
Sbjct: 37 SETLPERPGEPDCPFFLKTQKCKFGTKCKFNHPNVPSENDDVS--GLPERPQEPPCAFYL 94
Query: 182 IYGICKFGPTCKFDHP 197
G CK+G CKF HP
Sbjct: 95 KTGKCKYGAACKFHHP 110
>Medtr8g446930.1 | zinc finger CCCH domain protein | HC |
chr8:18375329-18366321 | 20130731
Length = 512
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 62/206 (30%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
M+TGSCKFGA+C+++HP +A P S + P+
Sbjct: 322 MKTGSCKFGASCRYNHPDMNA-------INPPVSALGPS--------------------- 353
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGES--LSGG 118
++ + + N MG++NPA +SF Y+ +P S +S
Sbjct: 354 -----------------VLASSTANLNMGAINPA--ASF------YQAFDPSLSNPMSQV 388
Query: 119 QALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERV-------AQSLINPLGLPVR 171
+ P RP Q EC ++M +G CK+G CK+HHP +R + + GLP R
Sbjct: 389 GVTGTIYPQRPGQIECDFYMKSGICKFGERCKYHHPIDRTTSLSKLQSNVKLTAAGLPRR 448
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHP 197
G IC YY CKFG TCKFDHP
Sbjct: 449 EGVEICPYYLKTATCKFGATCKFDHP 474
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 103/257 (40%), Gaps = 85/257 (33%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMSYLS 60
M T +CKFG +CKF HP + G P I+P+ +LP P +L
Sbjct: 151 MLTRTCKFGESCKFDHPIWVPAGGIPDWKEVPN--IVPSETLPERPGEPDCPF----FLK 204
Query: 61 GQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAMPSSFPGSNLVYEYMNPGESLSGGQA 120
Q + T +P +PS + +SG
Sbjct: 205 TQKC------------------KFGTKCKFNHPNVPSE-------------NDDVSG--- 230
Query: 121 LSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKE-----------RVAQS-------- 161
LP+RP +P C +++ TG CKYG+ CKFHHPK+ V Q+
Sbjct: 231 ----LPERPQEPPCAFYLKTGKCKYGAACKFHHPKDIQIQLSDDLSRTVEQTQTNSSVFD 286
Query: 162 -----------LINPL-----GLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAIPQNY 205
LI+PL GLPVRP + C +Y G CKFG +C+++HP +
Sbjct: 287 GAIGDTQSIMPLISPLSHNSKGLPVRPREVDCPFYMKTGSCKFGASCRYNHP------DM 340
Query: 206 GMTSPSLSVLDASSLMS 222
+P +S L S L S
Sbjct: 341 NAINPPVSALGPSVLAS 357
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHH---------PKERVAQSLINPLGLPVRPGQAI 176
P RP + +C ++M T TCK+G CKF H P + +++ LP RPG+
Sbjct: 139 PQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPAGGIPDWKEVPNIVPSETLPERPGEPD 198
Query: 177 CSYYRIYGICKFGPTCKFDHPVV 199
C ++ CKFG CKF+HP V
Sbjct: 199 CPFFLKTQKCKFGTKCKFNHPNV 221
>Medtr1g088875.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr1:39809788-39813738 | 20130731
Length = 348
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---RVAQSLINPLGLPVRPGQAICSYYRI 182
P+R +P C+Y++ TGTCK+G+ CKFHHPK ++Q+ +N G P+RPG++ CSYY
Sbjct: 92 PERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRPGESECSYYLK 151
Query: 183 YGICKFGPTCKFDHP 197
G CKFG TCKF HP
Sbjct: 152 TGQCKFGVTCKFHHP 166
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 1 MRTGSCKFGAACKFHHPQ-QHASFGA-----YSLAGSPTSTIIPASSLPYVGAFPAWSVP 54
++TG CKFG CKFHHPQ S A Y SPT +P + GA + V
Sbjct: 150 LKTGQCKFGVTCKFHHPQPAGTSLPASAPQFYQQVQSPTVPPLPEQ---FGGASASVRVA 206
Query: 55 RMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAM-PSSFP--GSNLVYEYMNP 111
R L G +VP W+ Y ++P + P + P G+ +Y
Sbjct: 207 RPPVLPG-SYVQGAYGPVLLSPGVVPFPGWSPYSAPVSPVLSPGAQPAVGATSLYGVTQL 265
Query: 112 GESLS---------------GGQAL-SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPK 155
S S GG L P+RP +P C+Y+M TG CK+G C++HHP+
Sbjct: 266 SSSTSAFARPYTPLPSSPGPGGSTLQEKVFPERPGEPVCQYYMRTGDCKFGLACRYHHPR 325
Query: 156 ERV-AQSLINPLGLPVRP 172
++V A+ L++P GLP+RP
Sbjct: 326 DQVAARPLLSPFGLPLRP 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 114 SLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL--GLPVR 171
SL G + S P+R P C Y+M TG C YG C+F+HP++R A + P R
Sbjct: 36 SLGSGGGVES-YPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATGDYPER 94
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHP 197
G+ C YY G CKFG +CKF HP
Sbjct: 95 LGEPPCQYYLKTGTCKFGASCKFHHP 120
>Medtr1g088875.2 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr1:39809788-39813799 | 20130731
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---RVAQSLINPLGLPVRPGQAICSYYRI 182
P+R +P C+Y++ TGTCK+G+ CKFHHPK ++Q+ +N G P+RPG++ CSYY
Sbjct: 92 PERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRPGESECSYYLK 151
Query: 183 YGICKFGPTCKFDHP 197
G CKFG TCKF HP
Sbjct: 152 TGQCKFGVTCKFHHP 166
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 1 MRTGSCKFGAACKFHHPQ-QHASFGA-----YSLAGSPTSTIIPASSLPYVGAFPAWSVP 54
++TG CKFG CKFHHPQ S A Y SPT +P + GA + V
Sbjct: 150 LKTGQCKFGVTCKFHHPQPAGTSLPASAPQFYQQVQSPTVPPLPEQ---FGGASASVRVA 206
Query: 55 RMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAM-PSSFP--GSNLVYEYMNP 111
R L G +VP W+ Y ++P + P + P G+ +Y
Sbjct: 207 RPPVLPGSYVQGAYGPVLLSPG-VVPFPGWSPYSAPVSPVLSPGAQPAVGATSLYGVTQL 265
Query: 112 GESLS---------------GGQAL-SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPK 155
S S GG L P+RP +P C+Y+M TG CK+G C++HHP+
Sbjct: 266 SSSTSAFARPYTPLPSSPGPGGSTLQEKVFPERPGEPVCQYYMRTGDCKFGLACRYHHPR 325
Query: 156 ERV-AQSLINPLGLPVRP 172
++V A+ L++P GLP+RP
Sbjct: 326 DQVAARPLLSPFGLPLRP 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 114 SLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL--GLPVR 171
SL G + S P+R P C Y+M TG C YG C+F+HP++R A + P R
Sbjct: 36 SLGSGGGVES-YPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATGDYPER 94
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHP 197
G+ C YY G CKFG +CKF HP
Sbjct: 95 LGEPPCQYYLKTGTCKFGASCKFHHP 120
>Medtr1g088875.3 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr1:39809788-39813831 | 20130731
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKE---RVAQSLINPLGLPVRPGQAICSYYRI 182
P+R +P C+Y++ TGTCK+G+ CKFHHPK ++Q+ +N G P+RPG++ CSYY
Sbjct: 92 PERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRPGESECSYYLK 151
Query: 183 YGICKFGPTCKFDHP 197
G CKFG TCKF HP
Sbjct: 152 TGQCKFGVTCKFHHP 166
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 1 MRTGSCKFGAACKFHHPQ-QHASFGA-----YSLAGSPTSTIIPASSLPYVGAFPAWSVP 54
++TG CKFG CKFHHPQ S A Y SPT +P + GA + V
Sbjct: 150 LKTGQCKFGVTCKFHHPQPAGTSLPASAPQFYQQVQSPTVPPLPEQ---FGGASASVRVA 206
Query: 55 RMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMGSMNPAM-PSSFP--GSNLVYEYMNP 111
R L G +VP W+ Y ++P + P + P G+ +Y
Sbjct: 207 RPPVLPGSYVQGAYGPVLLSPG-VVPFPGWSPYSAPVSPVLSPGAQPAVGATSLYGVTQL 265
Query: 112 GESLS---------------GGQAL-SSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPK 155
S S GG L P+RP +P C+Y+M TG CK+G C++HHP+
Sbjct: 266 SSSTSAFARPYTPLPSSPGPGGSTLQEKVFPERPGEPVCQYYMRTGDCKFGLACRYHHPR 325
Query: 156 ERV-AQSLINPLGLPVRP 172
++V A+ L++P GLP+RP
Sbjct: 326 DQVAARPLLSPFGLPLRP 343
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 114 SLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPL--GLPVR 171
SL G + S P+R P C Y+M TG C YG C+F+HP++R A + P R
Sbjct: 36 SLGSGGGVES-YPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATGDYPER 94
Query: 172 PGQAICSYYRIYGICKFGPTCKFDHP 197
G+ C YY G CKFG +CKF HP
Sbjct: 95 LGEPPCQYYLKTGTCKFGASCKFHHP 120
>Medtr2g019740.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr2:6500046-6505955 | 20130731
Length = 482
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 126 PDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL----INPLGLPVRPGQAICSYYR 181
P+R QP C+Y+M T +CK+G+ CK+HHPK+ A +N G P+RPG+ CSY+
Sbjct: 91 PERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPGEKECSYFV 150
Query: 182 IYGICKFGPTCKFDHPVVA 200
G CKFG TCKFDHPV A
Sbjct: 151 KTGQCKFGATCKFDHPVPA 169
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 1 MRTGSCKFGAACKFHHP---QQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWSVPRMS 57
++TG CKFGA CKF HP + S +P+ P V S ++
Sbjct: 150 VKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYPTVQTPSGPSSQQIG 209
Query: 58 YLSGQ------XXXXXXXXXXXXXXXIVPAQSWNTYMGS-MNPAMPSSFP---GSNLVY- 106
L + +VP W Y + +P +PS P GS +Y
Sbjct: 210 VLVARPPLLHGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLPSGSPANVGSTQLYG 269
Query: 107 --EYMNPGESLSGGQALS-------------STLPDRPDQPECKYFMSTGTCKYGSDCKF 151
+ +PG + +G LS + P P+QPE Y+ + ++
Sbjct: 270 ITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYHYYSKPEELPFAPSYRY 329
Query: 152 HHPKERVA---QSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVAI 201
H P + A ++++P GLP+RPG A+C++Y GICKFGP CKFDHP+ +
Sbjct: 330 HKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKFDHPIAPL 382
>Medtr4g119280.2 | zinc finger C-x8-C-x5-C-x3-H type protein | HC |
chr4:49394674-49390649 | 20130731
Length = 379
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 101 GSNLVYEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQ 160
GS + + ++ G ++ P+R QP C+Y+ TG+CK+G+ CK+HHP++
Sbjct: 64 GSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGT 123
Query: 161 S---LINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHPVVA 200
+ +N G P+R G+ CSYY G CKFG TCKF HP A
Sbjct: 124 TPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPA 166
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 124 TLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSLINPLGL----PVRPGQAICSY 179
+ P RPD+ +C Y++ TG C YGS C+F+HP++R A +I + P R GQ +C Y
Sbjct: 42 SYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGA--VIGAARIAGEYPERVGQPVCQY 99
Query: 180 YRIYGICKFGPTCKFDHPVVA 200
Y G CKFG +CK+ HP A
Sbjct: 100 YARTGSCKFGASCKYHHPRQA 120
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 106 YEYMNPGESLSGGQALSSTLPDRPDQPECKYFMSTGTCKYGSDCKFHHPKERVAQSL-IN 164
Y+ P SG +LP+RPDQ EC+++M TG CK+GS C++HHP + A + ++
Sbjct: 311 YQSSGPSTGPSGSSQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKVNLS 370
Query: 165 PLGLPVRPG 173
P+GLP+RPG
Sbjct: 371 PIGLPLRPG 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 1 MRTGSCKFGAACKFHHPQQHASFGAYSLAGSPTSTIIPASSLPYVGAFPAWS-------- 52
++TG CKFGA CKFHHPQ G +A SP + P LP P +
Sbjct: 147 VKTGQCKFGATCKFHHPQ---PAGGQMIAPSPVPQVSP---LPMPVPSPIYQTVQPPSGP 200
Query: 53 --------VPRMSYLSGQXXXXXXXXXXXXXXXIVPAQSWNTYMG-SMNPAMPSSFP--- 100
V R L G +VP W+ Y + +P +PSS P
Sbjct: 201 SQQQYGVLVARPPLLHG-SFVQGPYGPMVMSPTMVPFSGWSPYQAPAGSPVLPSSNPLSV 259
Query: 101 GSNLVYEYMN-PGESLSGGQALSSTL----PDRPDQPECKYFMSTGTCKYGSDCKFHHPK 155
GS +Y P + + Q S T P + P + S+G + P
Sbjct: 260 GSTQLYGITQLPSPTTAYTQLPSPTTAYTGPYQSSGPSAGPYQSSGPS--AGPYQSSGPS 317
Query: 156 ERVAQSLINPLGLPVRPGQAICSYYRIYGICKFGPTCKFDHP 197
+ S LP RP Q C +Y G CKFG TC++ HP
Sbjct: 318 TGPSGSSQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHP 359