Miyakogusa Predicted Gene

Lj2g3v2866100.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2866100.1 Non Characterized Hit- tr|I1M7J7|I1M7J7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13437
PE,87.88,0,seg,NULL; Zw10,RZZ complex, subunit Zw10; SUBFAMILY NOT
NAMED,NULL; CENTROMERE/KINETOCHORE PROTEIN Z,CUFF.39371.1
         (561 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g084830.1 | centromere/kinetochore zw10-like protein | HC ...   933   0.0  

>Medtr5g084830.1 | centromere/kinetochore zw10-like protein | HC |
           chr5:36612940-36619020 | 20130731
          Length = 561

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/561 (82%), Positives = 490/561 (87%)

Query: 1   MEKAVRFDRGLNQVEVKYKLEVDTMNGIQLQAVLEAMEVVGILEYGVAKVADLMIKYVIT 60
           MEKAVRFD  LNQ+EVKY+LEV  ++G+QLQ VLEAMEVVGILEYG+AKVADLMIKYVIT
Sbjct: 1   MEKAVRFDGDLNQIEVKYQLEVHNLSGVQLQMVLEAMEVVGILEYGLAKVADLMIKYVIT 60

Query: 61  PFLNGGQPLSFLEESNQESAVLKIVSSPDSKLEYLDGEFLYSGILHFIKFIYGSICFQNS 120
           PF+N GQPLSFLEESNQ+SA+LKIV SPDSKLEYLDGE LYSGI+ FIKFIY SICFQNS
Sbjct: 61  PFINRGQPLSFLEESNQDSALLKIVPSPDSKLEYLDGELLYSGIVLFIKFIYRSICFQNS 120

Query: 121 SWMQCFGRLTWPRIAEQIISSFLSKVVPTDASKLPDFQKIIKCTSEFEMALEELMFISAS 180
           SW++ FGRLTWPRI+E IISSFLSKVVPTDASKLPDFQKIIKCTS+FE  L+ELMFIS S
Sbjct: 121 SWIRSFGRLTWPRISELIISSFLSKVVPTDASKLPDFQKIIKCTSDFETDLKELMFISPS 180

Query: 181 DDKDNRLSKFAENVEVHFASKKKTEILAKARSLLLECDFSIPQEYTRDSSVWKNDETSIQ 240
           DDKDNRLS FAENVEVHFA KKKTEILAKAR LLLECDFSIPQEYTRD S+WKND TSI 
Sbjct: 181 DDKDNRLSNFAENVEVHFAFKKKTEILAKARDLLLECDFSIPQEYTRDGSIWKNDGTSIL 240

Query: 241 SSSHVVDLLFLSERCLVSKAAKQLMVLIHQTLQDVCLSSTRVALEFYRAARDAILLYEVV 300
           SSSHVVDL+FLSERCLVSKAAKQLM LIHQTLQD+CLSSTRVA+EFY AARDAILLYEVV
Sbjct: 241 SSSHVVDLIFLSERCLVSKAAKQLMELIHQTLQDICLSSTRVAMEFYHAARDAILLYEVV 300

Query: 301 VPIKLERQLNGINQVAVLMHNDCLYLSREIPGFAFEYRTDFPSSIKEHAVFVDLAPRFQL 360
           VP+KLERQL GINQVAVLMHNDCLYLS+EI GFAFEYRTDFPSS+KEHAVF DLAPRFQL
Sbjct: 301 VPVKLERQLGGINQVAVLMHNDCLYLSQEILGFAFEYRTDFPSSMKEHAVFADLAPRFQL 360

Query: 361 LAEEILQRQVHLVILNLNEAIDGADGFQNTHQMQQFESTKFSIDQVVFILGKVHIIWEPL 420
           LAE+ILQRQVHLVI NL EAID ADGFQNTHQMQ+FES KFSIDQVVF L KVHIIWEPL
Sbjct: 361 LAEDILQRQVHLVIYNLKEAIDSADGFQNTHQMQEFESAKFSIDQVVFSLEKVHIIWEPL 420

Query: 421 LLPSTYKKSMCTVLESVFSXXXXXXXXXXXXXXXETLQLQRLIQLMXXXXXXXXXXXATG 480
           LLP TYKKSMCTVLESVFS               ETLQLQRLI LM            TG
Sbjct: 421 LLPLTYKKSMCTVLESVFSRIARDILLLDDIAAEETLQLQRLIHLMLENLSSLFESLVTG 480

Query: 481 VQNSHEFSMESLEDLIPSMRKIRKLSELLDMPLKSITASWEDKELFSCGFTITEVEDFIK 540
             N  EF  ESLEDLIPS+RKIRKLSELLDMPLKSIT SWE+KEL SCGFTI+EVEDFIK
Sbjct: 481 DPNLSEFPAESLEDLIPSLRKIRKLSELLDMPLKSITGSWENKELISCGFTISEVEDFIK 540

Query: 541 AIFTDSPLRKDCLWRIQSTSF 561
           AIF DSPLRKDCL RIQ+TSF
Sbjct: 541 AIFADSPLRKDCLRRIQNTSF 561