Miyakogusa Predicted Gene

Lj2g3v2856020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2856020.1 Non Characterized Hit- tr|I1M7K2|I1M7K2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18582
PE,82.72,0,Metallo-hydrolase/oxidoreductase,NULL; seg,NULL; no
description,NULL; RIBONUCLEASE Z, CHLOROPLAST,NU,CUFF.39369.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g084700.1 | nuclear ribonuclease Z | HC | chr5:36544186-36...   587   e-168
Medtr5g093920.2 | nuclear ribonuclease Z | HC | chr5:41017604-41...   346   2e-95
Medtr5g093920.1 | nuclear ribonuclease Z | HC | chr5:41017604-41...   345   3e-95
Medtr1g033550.1 | nuclear ribonuclease Z | HC | chr1:12114933-12...   343   1e-94
Medtr5g093920.3 | nuclear ribonuclease Z | HC | chr5:41017604-41...   283   2e-76
Medtr1g033550.2 | nuclear ribonuclease Z | HC | chr1:12114933-12...   281   7e-76
Medtr5g093930.1 | nuclear ribonuclease Z, putative | LC | chr5:4...    85   1e-16

>Medtr5g084700.1 | nuclear ribonuclease Z | HC |
           chr5:36544186-36548259 | 20130731
          Length = 357

 Score =  587 bits (1512), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/351 (80%), Positives = 308/351 (87%), Gaps = 6/351 (1%)

Query: 1   MQISLTNSAFETLKIFPFHQPIFPQKPPNHHQVSLPTQLNAVKGSGYLSNISKAIDYEEQ 60
           MQI LTN  F+  +IFPFH  I    P    Q+S PT  N++KGSGYLS ISKAIDYEEQ
Sbjct: 13  MQIPLTNPTFKPPQIFPFHHTI----PSPKQQLSFPT--NSLKGSGYLSEISKAIDYEEQ 66

Query: 61  YKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFITH 120
           Y++AKSQV RKGL+LEGYSIEG+SIGG ETCIII EFKCAFDIGRCPTRAIHQNFVFITH
Sbjct: 67  YRVAKSQVQRKGLDLEGYSIEGVSIGGHETCIIIPEFKCAFDIGRCPTRAIHQNFVFITH 126

Query: 121 AHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVALDV 180
           AHLDHIGGLPMYI SRGLYNLKP TVFVPPCIK+DV+KLLD+H+TLGQVELN ELVALDV
Sbjct: 127 AHLDHIGGLPMYIGSRGLYNLKPPTVFVPPCIKDDVQKLLDVHKTLGQVELNCELVALDV 186

Query: 181 GETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEITDT 240
           GETYEIRN+LVVRPF+TQHVIPSQGY+VYSIR KL+KQY+HL GKQIEKLKKSGVEITDT
Sbjct: 187 GETYEIRNDLVVRPFRTQHVIPSQGYIVYSIRKKLRKQYSHLNGKQIEKLKKSGVEITDT 246

Query: 241 ILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSYSIEHAREHGHTHIFELME 300
           ILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDS ++EHAR+HGHTHI EL+E
Sbjct: 247 ILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSTTVEHARQHGHTHISELIE 306

Query: 301 NAQWIRNKTVLLTHFSSRYNIEEIRXXXXXXXXXXXXXVVPLTEGFKSMYS 351
           NAQWIRNKTVLLTHFSSRYNIE+IR             VVPLTEGFKS Y+
Sbjct: 307 NAQWIRNKTVLLTHFSSRYNIEDIRQAASELQSKTSAKVVPLTEGFKSQYT 357


>Medtr5g093920.2 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011915 | 20130731
          Length = 316

 Score =  346 bits (887), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 157/288 (54%), Positives = 212/288 (73%)

Query: 59  EQYKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFI 118
           E+    +S+   KGLN+EGY +EGLSIGG ETC+I   F+ AFDIGRCP RA+  +F+ I
Sbjct: 29  EKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSNFRVAFDIGRCPPRAVSMDFLLI 88

Query: 119 THAHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVAL 178
           +HAH+DHIGGLPMY+A+RGLY +KP T+ VP  +KEDVEKL +IHR + Q EL   L+ L
Sbjct: 89  SHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGL 148

Query: 179 DVGETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEIT 238
           DVGE + +R +L V+ F+T HVIPSQGY++YS++NKLK +Y  L G +I+KLK SGVEIT
Sbjct: 149 DVGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEIT 208

Query: 239 DTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSYSIEHAREHGHTHIFEL 298
           +T+  PE+AFTGDT SDF++D  N D LRAKVL+ E+TF+++  ++EHAR++GHTH+ E+
Sbjct: 209 NTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEI 268

Query: 299 MENAQWIRNKTVLLTHFSSRYNIEEIRXXXXXXXXXXXXXVVPLTEGF 346
           +  A  ++NK +LL HFS+RY +EEI+                LTEGF
Sbjct: 269 ISYADKLQNKAILLIHFSARYTVEEIQQAVSALPPPLAGRTFALTEGF 316


>Medtr5g093920.1 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011841 | 20130731
          Length = 293

 Score =  345 bits (886), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 157/288 (54%), Positives = 212/288 (73%)

Query: 59  EQYKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFI 118
           E+    +S+   KGLN+EGY +EGLSIGG ETC+I   F+ AFDIGRCP RA+  +F+ I
Sbjct: 6   EKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSNFRVAFDIGRCPPRAVSMDFLLI 65

Query: 119 THAHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVAL 178
           +HAH+DHIGGLPMY+A+RGLY +KP T+ VP  +KEDVEKL +IHR + Q EL   L+ L
Sbjct: 66  SHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGL 125

Query: 179 DVGETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEIT 238
           DVGE + +R +L V+ F+T HVIPSQGY++YS++NKLK +Y  L G +I+KLK SGVEIT
Sbjct: 126 DVGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEIT 185

Query: 239 DTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSYSIEHAREHGHTHIFEL 298
           +T+  PE+AFTGDT SDF++D  N D LRAKVL+ E+TF+++  ++EHAR++GHTH+ E+
Sbjct: 186 NTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEI 245

Query: 299 MENAQWIRNKTVLLTHFSSRYNIEEIRXXXXXXXXXXXXXVVPLTEGF 346
           +  A  ++NK +LL HFS+RY +EEI+                LTEGF
Sbjct: 246 ISYADKLQNKAILLIHFSARYTVEEIQQAVSALPPPLAGRTFALTEGF 293


>Medtr1g033550.1 | nuclear ribonuclease Z | HC |
           chr1:12114933-12110834 | 20130731
          Length = 335

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 157/288 (54%), Positives = 212/288 (73%)

Query: 59  EQYKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFI 118
           E+    +S+   KGLN+EGY +EGLSIGG ETC+I   F+ AFDIGRCP RA+  +F+ I
Sbjct: 48  EKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSHFRVAFDIGRCPPRAVSMDFLLI 107

Query: 119 THAHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVAL 178
           +HAH+DHIGGLPMY+A+RGLY +KP T+ VP  +KEDVEKL +IHR + Q EL   LV L
Sbjct: 108 SHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLVGL 167

Query: 179 DVGETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEIT 238
           DVGE + +R++L V+ F+T HVIPSQGY++YS++NKLK +Y  L   +I+KLK SGVEIT
Sbjct: 168 DVGEEFSLRHDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSSDEIKKLKFSGVEIT 227

Query: 239 DTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSYSIEHAREHGHTHIFEL 298
           +T+  PE+AFTGDT SDF++D  N D LRAKVL+ E+TF+++  ++EHAR++GHTH+ E+
Sbjct: 228 NTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLESTFVNNEMTVEHARDYGHTHLSEI 287

Query: 299 MENAQWIRNKTVLLTHFSSRYNIEEIRXXXXXXXXXXXXXVVPLTEGF 346
           +  A  ++NK +LL HFS+RY +EEI+                LTEGF
Sbjct: 288 ISYADRLQNKAILLIHFSARYTVEEIQQAVGALPPPLAGRTFALTEGF 335


>Medtr5g093920.3 | nuclear ribonuclease Z | HC |
           chr5:41017604-41011841 | 20130731
          Length = 247

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 128/217 (58%), Positives = 166/217 (76%)

Query: 59  EQYKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFI 118
           E+    +S+   KGLN+EGY +EGLSIGG ETC+I   F+ AFDIGRCP RA+  +F+ I
Sbjct: 6   EKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSNFRVAFDIGRCPPRAVSMDFLLI 65

Query: 119 THAHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVAL 178
           +HAH+DHIGGLPMY+A+RGLY +KP T+ VP  +KEDVEKL +IHR + Q EL   L+ L
Sbjct: 66  SHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLIGL 125

Query: 179 DVGETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEIT 238
           DVGE + +R +L V+ F+T HVIPSQGY++YS++NKLK +Y  L G +I+KLK SGVEIT
Sbjct: 126 DVGEEFSLRQDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSGDEIKKLKFSGVEIT 185

Query: 239 DTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEA 275
           +T+  PE+AFTGDT SDF++D  N D LRAKVL+ E 
Sbjct: 186 NTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLEV 222


>Medtr1g033550.2 | nuclear ribonuclease Z | HC |
           chr1:12114933-12112581 | 20130731
          Length = 289

 Score =  281 bits (719), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 128/217 (58%), Positives = 166/217 (76%)

Query: 59  EQYKLAKSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFI 118
           E+    +S+   KGLN+EGY +EGLSIGG ETC+I   F+ AFDIGRCP RA+  +F+ I
Sbjct: 48  EKSSETESKKKSKGLNIEGYQVEGLSIGGHETCVIFSHFRVAFDIGRCPPRAVSMDFLLI 107

Query: 119 THAHLDHIGGLPMYIASRGLYNLKPATVFVPPCIKEDVEKLLDIHRTLGQVELNVELVAL 178
           +HAH+DHIGGLPMY+A+RGLY +KP T+ VP  +KEDVEKL +IHR + Q EL   LV L
Sbjct: 108 SHAHMDHIGGLPMYVATRGLYRMKPPTIIVPISVKEDVEKLFEIHRKMDQSELKHNLVGL 167

Query: 179 DVGETYEIRNNLVVRPFKTQHVIPSQGYVVYSIRNKLKKQYTHLQGKQIEKLKKSGVEIT 238
           DVGE + +R++L V+ F+T HVIPSQGY++YS++NKLK +Y  L   +I+KLK SGVEIT
Sbjct: 168 DVGEEFSLRHDLKVKAFRTYHVIPSQGYILYSVKNKLKPEYIGLSSDEIKKLKFSGVEIT 227

Query: 239 DTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEA 275
           +T+  PE+AFTGDT SDF++D  N D LRAKVL+ E 
Sbjct: 228 NTLKEPEIAFTGDTMSDFIIDENNTDVLRAKVLVLEV 264


>Medtr5g093930.1 | nuclear ribonuclease Z, putative | LC |
           chr5:41018741-41018433 | 20130731
          Length = 102

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/74 (48%), Positives = 49/74 (66%)

Query: 65  KSQVHRKGLNLEGYSIEGLSIGGQETCIIIHEFKCAFDIGRCPTRAIHQNFVFITHAHLD 124
           +S+   KGLN+EGY +E LSIGG E C+I   F+ AFDIGRCP R +  +F+ I+HAH+ 
Sbjct: 17  ESKKKSKGLNIEGYQVESLSIGGHEICVIFSNFRIAFDIGRCPPRFVSMDFLLISHAHMF 76

Query: 125 HIGGLPMYIASRGL 138
           HI    +Y  S  +
Sbjct: 77  HIVSFSLYFHSHNV 90