Miyakogusa Predicted Gene

Lj2g3v2843030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2843030.1 tr|Q5BN91|Q5BN91_ACEAT Sorting nexin 1
OS=Acetabularia acetabulum PE=2 SV=1,24.29,5e-18,seg,NULL;
coiled-coil,NULL; PhoX homologous domain, present in p47phox a,Phox
homologous domain; no ,CUFF.39320.1
         (423 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201...   478   e-135
Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698...   371   e-103
Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222...    76   5e-14
Medtr5g083420.1 | hypothetical protein | HC | chr5:36014637-3601...    50   4e-06

>Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201 |
           20130731
          Length = 516

 Score =  478 bits (1231), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/261 (88%), Positives = 252/261 (96%)

Query: 163 LGIFKELKQSVTNDWGAAKPLVVEEDKEFMEKKNSLNEFEQNLSNVSQQAESLVKCQQDV 222
           L IFKELKQSV+NDWG AKPLVVEEDKEFMEKK+ L EFEQ LSNVSQQAESLVK QQD+
Sbjct: 256 LRIFKELKQSVSNDWGGAKPLVVEEDKEFMEKKDKLMEFEQQLSNVSQQAESLVKFQQDM 315

Query: 223 GETMGELGLAFVKLTKFETEEAMFDSQQVRAADMRNVATAAVKASRLYRELNTQTIKHLD 282
           GETMGELGLAFVKLTKFETEEA F+SQ+VRAADM+NVATAAVKASRLYRELNTQTIKHLD
Sbjct: 316 GETMGELGLAFVKLTKFETEEAEFESQRVRAADMKNVATAAVKASRLYRELNTQTIKHLD 375

Query: 283 KLHEYLGTMLAVNNAFSDRSSALLTVQTLSTELASLHSRIEKLELASSKIFGGDKTRLRK 342
           KLHEYLGTMLA+NNAF+DRSSALLTVQTLS+ELASLHSRIEKLE+ASS+IFGGDK+R+RK
Sbjct: 376 KLHEYLGTMLAINNAFADRSSALLTVQTLSSELASLHSRIEKLEVASSRIFGGDKSRMRK 435

Query: 343 IDELKEAVRVTENAKVCADKEYERIKENNRSELERIDRERHNDFQNMLRGFVVNQAGYAE 402
           I+ELKEAVRVTE+AK+CAD+EYERIKENNRSELERID+ER +DFQNMLRGFVVNQAGYAE
Sbjct: 436 IEELKEAVRVTESAKICADREYERIKENNRSELERIDKERQSDFQNMLRGFVVNQAGYAE 495

Query: 403 KMAAVWEKLAEETATYSRDSS 423
           KMAAVWEKLAEET+TYS DSS
Sbjct: 496 KMAAVWEKLAEETSTYSSDSS 516



 Score =  190 bits (482), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/146 (69%), Positives = 115/146 (78%), Gaps = 15/146 (10%)

Query: 34  AIFTSFDGNGHDATTHEPTTQSGS------DYLHISVSDPQEEQDLTNSLV-GGNTFQTY 86
           AIFTSFD NGHD T  E  T++GS      D +HISVSDPQEEQ++TNSLV GG+++ TY
Sbjct: 59  AIFTSFDSNGHDQTL-ENLTRAGSGSGTESDSIHISVSDPQEEQEVTNSLVPGGSSYHTY 117

Query: 87  LITTRTNVPELGGPGSEYSVRRRFREVVTLSERLSEAYRGYVIPVRPEKSTVERQVMQKG 146
           LITTRT         SEY VRRRFREVVTLSERLSE YRGYVIPVRPEKS+VER+VMQK 
Sbjct: 118 LITTRTG-------KSEYGVRRRFREVVTLSERLSEVYRGYVIPVRPEKSSVERKVMQKE 170

Query: 147 EFVEQRRVALEKYLRKLGIFKELKQS 172
           EFVEQRR+ALEKYLRKLG+   + +S
Sbjct: 171 EFVEQRRLALEKYLRKLGLHPVIGKS 196


>Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698 |
           20130731
          Length = 565

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/261 (70%), Positives = 226/261 (86%)

Query: 163 LGIFKELKQSVTNDWGAAKPLVVEEDKEFMEKKNSLNEFEQNLSNVSQQAESLVKCQQDV 222
           L +FKELKQS+ NDWG +KPLVVEEDKEF+ KK  ++E EQ ++  SQQAESLVK QQD+
Sbjct: 305 LRLFKELKQSMANDWGGSKPLVVEEDKEFLAKKERVHELEQQINGASQQAESLVKAQQDM 364

Query: 223 GETMGELGLAFVKLTKFETEEAMFDSQQVRAADMRNVATAAVKASRLYRELNTQTIKHLD 282
           GETMGELGLAF+KLTKFE EEA+ +SQ+VRA DM+ VATAAVKASRL+RELN+QT+KHLD
Sbjct: 365 GETMGELGLAFIKLTKFENEEAVSESQRVRATDMKGVATAAVKASRLFRELNSQTVKHLD 424

Query: 283 KLHEYLGTMLAVNNAFSDRSSALLTVQTLSTELASLHSRIEKLELASSKIFGGDKTRLRK 342
            LHEYLG MLAV++AF+DR++ALLTVQTL +EL+SL SR EKLE ASSKIFGGDK+R RK
Sbjct: 425 TLHEYLGLMLAVHSAFTDRTNALLTVQTLLSELSSLQSRAEKLEAASSKIFGGDKSRTRK 484

Query: 343 IDELKEAVRVTENAKVCADKEYERIKENNRSELERIDRERHNDFQNMLRGFVVNQAGYAE 402
           ++EL++ +R TE+AK  A +EYERIKENNRSELER+DRER  DF NML+GFVVNQ GYAE
Sbjct: 485 LEELQDTIRATEDAKNVAIREYERIKENNRSELERLDRERQADFLNMLKGFVVNQVGYAE 544

Query: 403 KMAAVWEKLAEETATYSRDSS 423
           K+A VW K+ E+T+ Y+++S+
Sbjct: 545 KIANVWTKVVEDTSGYAKEST 565



 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 109/152 (71%), Gaps = 15/152 (9%)

Query: 34  AIFTSFDGNGHDATTHEPT---TQSG---------SDYLHISVSDPQEEQDLTNSLV-GG 80
           AIFTSFDG       + PT   +  G         S+YL I+VS+P +EQ+ +NS+V G 
Sbjct: 98  AIFTSFDGETSSNGVNTPTRSFSDGGVFSRSESLNSEYLRITVSNPVKEQENSNSIVPGS 157

Query: 81  NTFQTYLITTRTNVPELGGPGSEYSVRRRFREVVTLSERLSEAYRGYVIPVRPEKSTVER 140
           N++ TYLITTRTN+ E GG  +E+ VRRRF++VVTLS+RLSEAYRG+ IP RP+KS VE 
Sbjct: 158 NSYVTYLITTRTNLQEFGG--NEFGVRRRFKDVVTLSDRLSEAYRGFFIPPRPDKSIVES 215

Query: 141 QVMQKGEFVEQRRVALEKYLRKLGIFKELKQS 172
           QVMQK EFVEQRRV+LEKYLR+L     +++S
Sbjct: 216 QVMQKQEFVEQRRVSLEKYLRRLADHPVIRKS 247


>Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222 |
           20130731
          Length = 404

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 53/220 (24%)

Query: 59  YLHISVSDPQEEQDLTNSLVGGNTFQTYLITTRTNVPELGGPGSEYSVRRRFREVVTLSE 118
           +L +SV+DP +   L N   G   + +Y + T+TN  E  GP  E  V RR+ + V L +
Sbjct: 27  FLSVSVTDPVK---LGN---GVQAYISYRVITKTNFTEYQGP--EKIVIRRYSDFVWLRD 78

Query: 119 RLSEAYRGYVIPVRPEKSTVERQVMQKGEFVEQRRVALEKYLRKLGIFKELKQS------ 172
           RL E ++G  IP  PEKS VE+      EF+E RR AL+ ++ ++    EL+QS      
Sbjct: 79  RLFEKFKGIFIPPLPEKSAVEK-FRFSAEFIEMRRQALDVFVNRIASHHELRQSEDLRTF 137

Query: 173 ---------------------------VTND---------WGAAKPLVVEEDKEFMEKKN 196
                                      +  D          G  KP V E D E+ + K+
Sbjct: 138 LQAEEETMERLRSHETGIFKKPSDLMQIFKDVQSRVSDVVLGKEKP-VEESDAEYEKLKH 196

Query: 197 SLNEFEQNLSNVSQQAESLVKCQQDVGETMGELGLAFVKL 236
            + E E +L+   + A  LVK  +++G+++ + G A VKL
Sbjct: 197 YIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKA-VKL 235


>Medtr5g083420.1 | hypothetical protein | HC |
           chr5:36014637-36015781 | 20130731
          Length = 67

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 41/91 (45%)

Query: 264 VKASRLYRELNTQTIKHLDKLHEYLGTMLAVNNAFSDRSSALLTVQTLSTELASLHSRIE 323
           VK SRLY+ELNTQTIK LDKLHEYLG+    N                            
Sbjct: 18  VKDSRLYKELNTQTIKRLDKLHEYLGSWDNPN---------------------------- 49

Query: 324 KLELASSKIFGGDKTRLRKIDELKEAVRVTE 354
                        ++RLRKI+ LKEA RV++
Sbjct: 50  -------------RSRLRKIEVLKEAARVSK 67