Miyakogusa Predicted Gene

Lj2g3v2794500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2794500.1 Non Characterized Hit- tr|Q8LJN2|Q8LJN2_ORYSJ
Putative uncharacterized protein B1189A09.37 OS=Oryza
,41.43,2e-19,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.39285.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071470.1 | pollen Ole e I family allergens | HC | chr3:32...   223   5e-59
Medtr5g014340.1 | pollen protein Ole E I-like protein | LC | chr...   169   2e-42
Medtr7g102770.1 | pollen Ole e I family allergens | HC | chr7:41...    60   1e-09
Medtr4g088735.1 | pollen Ole e I family allergens | HC | chr4:35...    53   2e-07

>Medtr3g071470.1 | pollen Ole e I family allergens | HC |
           chr3:32064085-32063196 | 20130731
          Length = 168

 Score =  223 bits (569), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 126/174 (72%), Gaps = 8/174 (4%)

Query: 1   MASKNFITLSTFLLLQVIFFPCIAATENAPKAIXXXXXXXXXXXXYCQSCEHYGTWSLTG 60
           MA+ +F   S  LL        I A   A +A             YCQ+CEH GTWSL G
Sbjct: 1   MAATHFTIFSLLLL--------IVAFSYATEATIEKIDVVVETTVYCQTCEHSGTWSLNG 52

Query: 61  AKPIPSAKVSVTCKNHKGKLVYYKVFESDKNGYLYAQLEEFKMQHSLLDHPLHSCYVKPV 120
           AKPIPSAKVSVTCKNHKG + YYKVF++DKNGYLYAQLEEFKMQH +LDHPLH+C+VKP+
Sbjct: 53  AKPIPSAKVSVTCKNHKGHVSYYKVFQTDKNGYLYAQLEEFKMQHDILDHPLHACFVKPI 112

Query: 121 WSPLESCNLLSNVNHSLDGARLRYQNKRLRGSNYEAVVYSASPLAFRRSDCSHT 174
           WSPLE C+LL+NVN+ L+G+ LRY+NK LRG  YEAV+Y+A PLAF   DCS T
Sbjct: 113 WSPLEGCSLLANVNYGLNGSPLRYENKILRGRRYEAVIYAAGPLAFHPPDCSKT 166


>Medtr5g014340.1 | pollen protein Ole E I-like protein | LC |
           chr5:4805515-4803323 | 20130731
          Length = 245

 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 3/108 (2%)

Query: 47  CQSCEHYGTWSLTGAKPIPSAKVSVTCKNHKGKLVYYKVFESDKNGYLYAQLEEFKMQHS 106
           CQ+C+H GTWSL GAKPIPSAKVS+TCK H   + YYKVF +DKNGYLYAQLE FKMQH 
Sbjct: 141 CQTCDHSGTWSLNGAKPIPSAKVSITCKGH---VSYYKVFRTDKNGYLYAQLEGFKMQHY 197

Query: 107 LLDHPLHSCYVKPVWSPLESCNLLSNVNHSLDGARLRYQNKRLRGSNY 154
           + DHPLHSC+VKPV SP ESC++L+NVN+ L+G+ LRY+NKRLRGS Y
Sbjct: 198 IKDHPLHSCFVKPVCSPPESCSVLANVNYGLNGSPLRYENKRLRGSRY 245


>Medtr7g102770.1 | pollen Ole e I family allergens | HC |
           chr7:41639427-41638409 | 20130731
          Length = 182

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 9/126 (7%)

Query: 47  CQSC-EHYGTWSLTGAKPIPSAKVSVTCKNHKGKLVYYKVFESDKNGYLYAQLEEFKMQH 105
           CQ C + +  W ++G KPI  AKVS+TC + + +++YY    +D+ G     ++++K   
Sbjct: 41  CQDCSKGWNEW-VSGDKPIKGAKVSLTCMDKRNRVMYYTSDTTDELGLYDITVDKYKYGK 99

Query: 106 SLLDHPLHSCYVKPVWSPLESCNLLSNVNHSLDGARLRYQNKRLRGSNYEAVVYSASPLA 165
            L       CYV+ V SP   CN+L++      G +L Y     RG     + Y  +P  
Sbjct: 100 KL---DTKGCYVRLVSSPDNVCNILTDFGGGKAGYKLNYPTSVYRG----LIKYMVTPFY 152

Query: 166 FRRSDC 171
           +    C
Sbjct: 153 YTTPMC 158


>Medtr4g088735.1 | pollen Ole e I family allergens | HC |
           chr4:35327598-35325086 | 20130731
          Length = 276

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 13/124 (10%)

Query: 46  YCQSCEHYGTWSLTGAKPIPSAKVSVTCKNHKGKLVYYKVFESDKNGYLYAQLEEFKMQH 105
           Y +SC++ G  +L GA  I  A V + C N K KLV  KV  +DKNGY + +  +     
Sbjct: 159 YVKSCKYAGVDTLLGATQILGAVVKLQCNNTKYKLV-QKVQTTDKNGYFFIEGPK----- 212

Query: 106 SLLDHPLHSCYVKPVWSPLESCNLL--SNVNHSLDGARLRYQNKRLRGSNYEAVVYSASP 163
           ++  +  H C +  + +P    N L  SN++  L GA LR + K         ++Y+  P
Sbjct: 213 NITSYAAHKCNIVLISAP----NGLKPSNLHGGLTGAGLRPE-KPFVAKGLPFILYTVGP 267

Query: 164 LAFR 167
           LAF 
Sbjct: 268 LAFE 271