Miyakogusa Predicted Gene

Lj2g3v2770090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2770090.1 Non Characterized Hit- tr|I1M7S5|I1M7S5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.81,0,PREDICTED:
SIMILAR TO TSG24,NULL; MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY
MEMBER,Anaphase-promotin,CUFF.39389.1
         (320 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082890.1 | anaphase-promoting complex subunit 1 | HC | ch...   540   e-154

>Medtr5g082890.1 | anaphase-promoting complex subunit 1 | HC |
            chr5:35723483-35692350 | 20130731
          Length = 1805

 Score =  540 bits (1390), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/320 (83%), Positives = 280/320 (87%), Gaps = 2/320 (0%)

Query: 1    MSTLARECNYKDIETPTNVNVISMSTPYMLNLHPV--SSTISDAIGFEGTKFEXXXXXXX 58
            MSTLAREC YK+IETPTNVNVISMSTPYMLNLHPV  SSTISDAIG EGTK E       
Sbjct: 782  MSTLARECKYKEIETPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKLEDTDSVDG 841

Query: 59   XXXXXMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQAQLWHL 118
                 MEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQ QLW+L
Sbjct: 842  SMLDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSSRPVAIQTSVNHSASDQDLQQTQLWNL 901

Query: 119  AQRTTSLPLGRGAFTLATIHTLLTEAFIVPKLVLAGRLPAQQNATVNLDPNIRNIQELRS 178
            AQRTTSLPLGRGAFTLATIHTLLTE F VPKLVLAGRLPAQQNATVNLDPNIRNIQEL+S
Sbjct: 902  AQRTTSLPLGRGAFTLATIHTLLTETFSVPKLVLAGRLPAQQNATVNLDPNIRNIQELKS 961

Query: 179  WPEFHNAVAAGLRLAPFQGRMSRTWIIYNKPEEPNSXXXXXXXXXXXXXYLRVLTITDIY 238
            WPEFHNAVAAGLRLAP QG+MSRTWI YNKPEEP+S             +LRVL++TDIY
Sbjct: 962  WPEFHNAVAAGLRLAPLQGKMSRTWIAYNKPEEPSSVHAGLLLALGLHGFLRVLSVTDIY 1021

Query: 239  QYLYQEHESTTVGLMLGLAASYRGTMQPTISKSLCVHIPVRHPSSYPELEVPTLLQSAAL 298
            QY+ QEHEST+VGLMLGLA+SYRGTMQP +SK L VHIPVRHPSSYPELEVPTLLQSAAL
Sbjct: 1022 QYISQEHESTSVGLMLGLASSYRGTMQPAVSKLLYVHIPVRHPSSYPELEVPTLLQSAAL 1081

Query: 299  MSLGILYEGSANPQTMQVLL 318
            MSLGILYE SA+PQTMQVLL
Sbjct: 1082 MSLGILYESSAHPQTMQVLL 1101