Miyakogusa Predicted Gene

Lj2g3v2760040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2760040.1 tr|G7K258|G7K258_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_5g082890
PE=,82.76,0,Apc1,Anaphase-promoting complex subunit 1; seg,NULL;
PREDICTED: SIMILAR TO TSG24,NULL; MEIOTIC CHECK,CUFF.39384.1
         (754 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082890.1 | anaphase-promoting complex subunit 1 | HC | ch...  1232   0.0  

>Medtr5g082890.1 | anaphase-promoting complex subunit 1 | HC |
           chr5:35723483-35692350 | 20130731
          Length = 1805

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/754 (80%), Positives = 659/754 (87%)

Query: 1   MSIGERRLSLLGEFKPFGLIAEALDGKPPDTVTDKYDYFLFDPEIXXXXXXXXXXXXVAS 60
           MSIG RRL+LLGEFKPFGLIAE+LDGK  + VT+ Y+YFLFDPEI            VAS
Sbjct: 1   MSIGVRRLTLLGEFKPFGLIAESLDGKSIENVTENYEYFLFDPEIARDRDAEDDCNEVAS 60

Query: 61  ALNNRGDHELFIRGNRIIWSIGARVFKRFTLPHPIVKVCWCHLGHTAEALLCVLQNKCLM 120
           ALNNRGDHELF+RGNRIIWSIGARVFKRFTL  PI KVCWCHLGHTAEALLC+LQ   L 
Sbjct: 61  ALNNRGDHELFVRGNRIIWSIGARVFKRFTLESPIFKVCWCHLGHTAEALLCILQVDRLT 120

Query: 121 IYNTSGEIVSLPLPRTITSIWPLPFGLLLQQEVEATTPSRIPFSSTSPLFSARDILLSSS 180
           IYNTSGEIVS+ LPRTITSIWPLPFGLLLQQE EA+T SR  FSSTSPL S RD+LLS+S
Sbjct: 121 IYNTSGEIVSVRLPRTITSIWPLPFGLLLQQEFEASTSSRGSFSSTSPLPSVRDMLLSAS 180

Query: 181 GHIQKGEGSLVSSHLILMDPLDEEQPTFIQERGKLNVMKEYDEKTIWTSDLVPLMASYNK 240
            HIQKG+GSLVSSHLILMDPLDE+QPTFI+ERGKLN+MKEYDEKTIWTSD VPLMASYNK
Sbjct: 181 NHIQKGDGSLVSSHLILMDPLDEQQPTFIEERGKLNIMKEYDEKTIWTSDQVPLMASYNK 240

Query: 241 GKMQHSLWVAEIVNYNFDEAATSSLNINPMGVLPKHLSFRRIWQGKGSQTAACKVFMATD 300
           GKMQHSLWVAEI N NFDEAA+  LN +PMGVLPKHLSFRRIWQGKG+QTAACKVFMATD
Sbjct: 241 GKMQHSLWVAEISNSNFDEAASGLLNEDPMGVLPKHLSFRRIWQGKGAQTAACKVFMATD 300

Query: 301 DDTAPIVCFFHQEQKKMLSVSLQSVEINSEIVFDVKPDTSWIIAAVAASPVTVTRPRVKV 360
           DD AP VCFFHQEQ+K+LSVSLQ+VEIN+EIVFDVKPD SWIIAAVAASPV VTRPRVK+
Sbjct: 301 DDAAPAVCFFHQEQRKLLSVSLQTVEINNEIVFDVKPDKSWIIAAVAASPVMVTRPRVKI 360

Query: 361 GLLPYSDILVLTPENVLLLYSGKQCLCRYVLPSCLNKDKILHDWKLPETSSVPMDLKITG 420
           GLLPYSDI+VLTPEN LLLYSGKQCLC+YVLPSCLNKDKILHD +LPE+SS+   LKITG
Sbjct: 361 GLLPYSDIMVLTPENALLLYSGKQCLCQYVLPSCLNKDKILHDLELPESSSLSNALKITG 420

Query: 421 LADAVEGRXXXXXXXRQMFRCALRQSPSSSLANDCITALADGLSSSFYRHFIGLLWKNDD 480
           LADAVEGR       +QMFRCALRQSPSSSLANDCITALA+GL  SFYR+F+GLLWK+D 
Sbjct: 421 LADAVEGRVNVIVNNKQMFRCALRQSPSSSLANDCITALAEGLGFSFYRYFLGLLWKDDY 480

Query: 481 PADLSETESSVDSEWGSFCHVIMQICGKYNIISQKRSGPVSHSAWDFLLSSQFHNNFCKV 540
           P D S  ESSVDSEW SF  VIM+IC K NIISQK SG V H AW FLLSSQFH NFCK 
Sbjct: 481 PTDFSVAESSVDSEWDSFGRVIMKICRKSNIISQKHSGLVPHGAWKFLLSSQFHTNFCKA 540

Query: 541 NSMFGVSCAAPLNQLESNPPKSSIDGKQSSEKPFYNELLMESLESLHALYESLKLDSLRK 600
           NS+FG SCA PL+QL+SN   SSIDGK S E+PFY ELL+E LESLHALYESLKLD+LRK
Sbjct: 541 NSLFGKSCAVPLDQLQSNSSTSSIDGKHSFEEPFYTELLVECLESLHALYESLKLDNLRK 600

Query: 601 RDLELLAILLCNMADFLGENNYMDHYIRDFPGLCKKFQMSGTTLSLKISPSLFRWLENCL 660
           RDLE LA LLCN+A+FLGE+NY+DHYIRDFP  CKKF  SGTT+S KI PSLFRWLENCL
Sbjct: 601 RDLEHLAALLCNIANFLGEDNYLDHYIRDFPIFCKKFLKSGTTISPKIPPSLFRWLENCL 660

Query: 661 QHGWSCANISDLPSLVLKDGCSVVSLARKIVCFYSILSGANLLGKKLSSGVYCNIATGSH 720
           QHG++ ANISDLPSLV KDG  VVSLARKIVCFYSILSGANL+GKKLSSGVYCNI TGSH
Sbjct: 661 QHGFTYANISDLPSLVRKDGYHVVSLARKIVCFYSILSGANLVGKKLSSGVYCNITTGSH 720

Query: 721 SSKEELTMLAMVGERFGLQQLDSLPSGVSLPLRH 754
           SSKEELT+LAMVGERFGLQQLDSLPSGVSLPLRH
Sbjct: 721 SSKEELTVLAMVGERFGLQQLDSLPSGVSLPLRH 754