Miyakogusa Predicted Gene

Lj2g3v2748740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2748740.1 Non Characterized Hit- tr|C5YZD3|C5YZD3_SORBI
Putative uncharacterized protein Sb09g022940 OS=Sorghu,48.84,1e-18,GB
DEF: HYPOTHETICAL PROTEIN F27K19_140 (HYPOTHETICAL PROTEIN
AT3G55960),NULL; NUCLEAR LIM INTERACTO,CUFF.39238.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082660.1 | NLI interacting factor-like phosphatase | HC |...   140   4e-34
Medtr3g070810.1 | NLI interacting factor-like phosphatase | HC |...    67   5e-12

>Medtr5g082660.1 | NLI interacting factor-like phosphatase | HC |
           chr5:35576894-35571911 | 20130731
          Length = 305

 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/148 (55%), Positives = 89/148 (60%), Gaps = 11/148 (7%)

Query: 1   MGELTQAEVYSP-RTQQVWRALLSWLAXXXXXXXXXXRALGHYPLLXXXXXXXXXXXXXX 59
           MGELTQ EVYSP RTQQVW++LLSW A          R LGHYPLL              
Sbjct: 1   MGELTQTEVYSPPRTQQVWKSLLSWFAFFFQIFSQIIRTLGHYPLLSSSSSSSSSSSSTS 60

Query: 60  XXXXPHAFKPLPSVELQEHDSPPPSALEITA----VDHHPTQKXXXXXXXXXXXXCAYET 115
                 +FKPLPSVELQ+ DS   SALEITA     D  P QK            CAYET
Sbjct: 61  -----SSFKPLPSVELQDFDSSS-SALEITADYPAADQRPFQKLTVVLDLDETLVCAYET 114

Query: 116 SSLPASLRAQAIEGGLNWFDLECVSSDK 143
           SSLPA+LR+QAIE GLNWFD+ECVSSDK
Sbjct: 115 SSLPAALRSQAIEAGLNWFDMECVSSDK 142


>Medtr3g070810.1 | NLI interacting factor-like phosphatase | HC |
           chr3:31763089-31759998 | 20130731
          Length = 276

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 58/135 (42%), Gaps = 19/135 (14%)

Query: 9   VYSPRTQQVWRALLSWLAXXXXXXXXXXRALGHYPLLXXXXXXXXXXXXXXXXXXPHAFK 68
           +YSP TQQ W+A+LSW                 Y +                     +FK
Sbjct: 1   MYSPITQQAWKAVLSWFGF-------------FYQIFSQIIGSFADNYPLLSLSSNSSFK 47

Query: 69  PLPSVELQEHDSPPPSALEITAVDHHPTQKXXXXXXXXXXXXCAYETSSLPASLRAQAIE 128
           PL S++   H+S   +   I   DH   QK            CAYETSS+   L+ QA +
Sbjct: 48  PLSSLD---HES---AVQIIEDADHQQPQKLTVVLDLDETLICAYETSSVSDELKTQATQ 101

Query: 129 GGLNWFDLECVSSDK 143
            GLNWF+LECV  +K
Sbjct: 102 AGLNWFELECVFDNK 116