Miyakogusa Predicted Gene

Lj2g3v2736570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2736570.1 CUFF.39229.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082470.1 | pleckstrin-like (PH) domain protein | HC | chr...   245   1e-65
Medtr3g463520.1 | pleckstrin-like (PH) domain protein | HC | chr...   205   2e-53

>Medtr5g082470.1 | pleckstrin-like (PH) domain protein | HC |
           chr5:35440368-35439530 | 20130731
          Length = 144

 Score =  245 bits (625), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 121/132 (91%)

Query: 3   SLWRAATGQAEPPTDYDGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKDSA 62
           SLWR ATG    P DY GVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFK+S 
Sbjct: 4   SLWRYATGSTTNPVDYSGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKEST 63

Query: 63  VTRVSKPRGVVPVASCLTVKGAEDVLHKPYAFELSTRSDTMYFIADSDKEKEDWINSIGR 122
           +TR S PRGV+PVA+CLTVKGAED+LHKPYAFELSTR+DTMYFIADSDKEKEDWINSIGR
Sbjct: 64  ITRASIPRGVIPVATCLTVKGAEDILHKPYAFELSTRADTMYFIADSDKEKEDWINSIGR 123

Query: 123 SIVQHSRSVTDA 134
           SIV HSRSVTD+
Sbjct: 124 SIVLHSRSVTDS 135


>Medtr3g463520.1 | pleckstrin-like (PH) domain protein | HC |
           chr3:25445194-25445933 | 20130731
          Length = 148

 Score =  205 bits (521), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 96/132 (72%), Positives = 113/132 (85%), Gaps = 2/132 (1%)

Query: 1   MNSLWRAATGQAEPPTDYDGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKD 60
           M +LWR+ATGQ   P+DY G++FWSNPER+GWLTKQG+YIKTWRRRWFVLKQGKLFWFK+
Sbjct: 1   MENLWRSATGQEPNPSDYTGIQFWSNPERSGWLTKQGDYIKTWRRRWFVLKQGKLFWFKE 60

Query: 61  --SAVTRVSKPRGVVPVASCLTVKGAEDVLHKPYAFELSTRSDTMYFIADSDKEKEDWIN 118
             +A +  S PRGV+ V++CLTVKGAEDVLHK  AFELST   TM+FIAD+DK+KEDWIN
Sbjct: 61  PSAATSPSSVPRGVISVSTCLTVKGAEDVLHKASAFELSTPQTTMFFIADNDKDKEDWIN 120

Query: 119 SIGRSIVQHSRS 130
           SIGR+IV  SRS
Sbjct: 121 SIGRAIVLGSRS 132