Miyakogusa Predicted Gene

Lj2g3v2724460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2724460.1 Non Characterized Hit- tr|I3SCE1|I3SCE1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,81.82,0.00000000000003,Hs1pro-1_N,Hs1pro-1, N-terminal;
Hs1pro-1_C,Hs1pro-1, C-terminal; seg,NULL,CUFF.39224.1
         (249 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g070230.1 | nematode resistance HSPRO2-like protein | HC |...   285   2e-77
Medtr5g082150.1 | nematode resistance HSPRO2-like protein | HC |...   210   8e-55

>Medtr3g070230.1 | nematode resistance HSPRO2-like protein | HC |
           chr3:31474146-31472358 | 20130731
          Length = 458

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/243 (60%), Positives = 164/243 (67%), Gaps = 1/243 (0%)

Query: 1   MVDLHCKSKVLSPNMSSKTPKIXXXXXXXXXXXXXXXXX-XXXXEISAAAPPLCAAYDHY 59
           MVDLH K  + + +MSSK+PK+                      +ISAAAPPLCAAYD+Y
Sbjct: 1   MVDLHWKLNMPNSDMSSKSPKLSISEKSSPRNSLPSLQLPSITNDISAAAPPLCAAYDYY 60

Query: 60  LRLPELRTLWNARDFPNWTNEPILKPALQALEITFGLFSTVLSDPRPYANRREWNRRVES 119
           LRLPEL  LW +R+FPNW+NE ILKPALQALEITF   STVLSDPRPY N REW+RR+ES
Sbjct: 61  LRLPELSKLWESREFPNWSNESILKPALQALEITFRFISTVLSDPRPYTNSREWSRRLES 120

Query: 120 LATRQXXXXXXXXXXXXXNPDTRGTAPTADLXXXXXXXXXXXXXXLLPRLATWYRSKDAA 179
           LAT Q             NP+TRGTAPTA L              LLPRLATWY+SKD A
Sbjct: 121 LATWQIEIIAMLCEDEENNPETRGTAPTAYLSSGESKIRSYSETSLLPRLATWYKSKDVA 180

Query: 180 QRILLSVECQMRRCPYTLGLGEPNLAAKPSLMYDAVCRPNEVHELKTTPYDDRTRSWSRG 239
           QRILLSVECQM RC YTLGLGEPNLA KPSL YD VC+PNEVH LKTTPYDDR  ++   
Sbjct: 181 QRILLSVECQMMRCSYTLGLGEPNLAGKPSLKYDTVCKPNEVHNLKTTPYDDRIDNYENN 240

Query: 240 STR 242
           +  
Sbjct: 241 AVH 243


>Medtr5g082150.1 | nematode resistance HSPRO2-like protein | HC |
           chr5:35284168-35282370 | 20130731
          Length = 450

 Score =  210 bits (535), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 110/231 (47%), Positives = 137/231 (59%), Gaps = 6/231 (2%)

Query: 1   MVDLHCKSKVLSPNMSSKTPKIXXXXXXXXXXXXXXXXXXXXXEISAAAPPLCAAYDHYL 60
           MVDL  KSK+L+ N++ K+PK+                     +I+ A+  LC  YD+YL
Sbjct: 1   MVDLEWKSKMLNSNIAPKSPKLSLPLPTFHLPLPLTTN-----DITTASSTLCTTYDNYL 55

Query: 61  RLPELRTLWNARDFPNWTNEPILKPALQALEITFGLFSTVLSDPRPYANRREWNRRVESL 120
            LP L+TLW +  FPNW NEPI+KPAL ALEITF L +TVLSDPRPY N+REW RRVESL
Sbjct: 56  HLPHLQTLWYSSTFPNWANEPIIKPALTALEITFCLITTVLSDPRPYINKREWTRRVESL 115

Query: 121 ATRQXXXXXXXXXXXXXNPDTRGTAPTADLXXXXXXXX-XXXXXXLLPRLATWYRSKDAA 179
           A  Q             N +T G AP  +L               LLP+LATW +SK  A
Sbjct: 116 AKSQIHVIALLCDDEEQNTNTCGKAPITELSKIYQDQFRSYSEQSLLPKLATWQKSKQIA 175

Query: 180 QRILLSVECQMRRCPYTLGLGEPNLAAKPSLMYDAVCRPNEVHELKTTPYD 230
           QR+  +VE +M  C YTLGLGE N   KP L YD +C+PN +H L+TTP+D
Sbjct: 176 QRLFSTVESEMMTCNYTLGLGEQNFNGKPILRYDEICKPNFIHSLETTPFD 226