Miyakogusa Predicted Gene
- Lj2g3v2673920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2673920.1 tr|F6LPU8|F6LPU8_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_3g069590,77.61,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PRONE,Plant specific Rop nucleotide exchanger,
PRON,CUFF.39192.1
(589 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC | c... 813 0.0
Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC | c... 776 0.0
Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC | c... 660 0.0
Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC | c... 634 0.0
Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC | c... 554 e-158
Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC | ... 506 e-143
Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC | c... 430 e-120
Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC | c... 430 e-120
Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC | c... 405 e-113
Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC | c... 397 e-110
Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC | c... 381 e-106
Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC | c... 335 9e-92
Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC | c... 313 4e-85
Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC | c... 50 8e-06
>Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 595
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/594 (71%), Positives = 462/594 (77%), Gaps = 20/594 (3%)
Query: 1 METLSNKSDVSQKKRDGVQS-CVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPLGW 59
METLS S QKK+DG +S CVT PLGW
Sbjct: 1 METLSKNS---QKKKDGSRSSCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTPLGW 57
Query: 60 PILKASVSKRLNS---DDKENQHESHLE--DSKFTSIGLQISDVDMMKERFAKLLLGEDM 114
PILKA++S S DDKEN+H+S++E +K T++ +++SDVDMMKERFAKLLLGEDM
Sbjct: 58 PILKATLSSSKRSCSSDDKENKHKSNMEVEHTKCTTMDVKVSDVDMMKERFAKLLLGEDM 117
Query: 115 SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELI 174
SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLP EKK+MW+REMEWLVSVSDHIVELI
Sbjct: 118 SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWLVSVSDHIVELI 177
Query: 175 PSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAQD 234
PSWQTFPDG KLEVMTCRPR DI INLPALRKLDNMLLEILDSFTATEFWYVDQGIVA D
Sbjct: 178 PSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAAD 237
Query: 235 ADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQILKAAMAINSTAL 294
++GSASFRK+IQRQEEKWWLPVPRVP AGL E SRKKLNHSRE A+QILKAAM+INS AL
Sbjct: 238 SEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSRKKLNHSRESASQILKAAMSINSIAL 297
Query: 295 AEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDISSEHVALEIANRVEA 354
AEMEVPESYLE LPKNGRTCLGDFIYRYITSDQFS ECLLDCLD+SSEH+ALEIANRVEA
Sbjct: 298 AEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHIALEIANRVEA 357
Query: 355 AIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKRELLADRAENILLSLKQRFPGL 414
AIY+W W +VKDFM+DGDKRELLA RAENIL SLK RFPGL
Sbjct: 358 AIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKRELLAHRAENILSSLKHRFPGL 417
Query: 415 SQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYVDDLTKHSDKFALVPS 474
+QTTLDTSKIQCNKDVGKSILESYSRVLESMA+NII+RIDDLLYVD+LTKHSD+FALVP+
Sbjct: 418 TQTTLDTSKIQCNKDVGKSILESYSRVLESMAYNIISRIDDLLYVDELTKHSDRFALVPT 477
Query: 475 TVNMASQKKVSCPSFSVSVSDTPRKSAVGTPRFSPA-PLISPARGERTPFLN-------N 526
T NM SQ+ + FSVSVS TP K+A GTP+FSP+ PLISP RGERTPFL+ N
Sbjct: 478 TGNMVSQQILR--PFSVSVSGTPHKAAFGTPKFSPSVPLISPVRGERTPFLHNNNNNNVN 535
Query: 527 NNNIIKPHRRGFGVRRVLSNYLGGETTKXXXXXXXXXXXXXXXXXXKTEQRLKE 580
N N IKP RRGFGVRR LSNYLG E TK KTEQ KE
Sbjct: 536 NVNNIKPQRRGFGVRRALSNYLGVE-TKTKTCANTTEVNGSNPSSKKTEQPQKE 588
>Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:34865519-34861053 | 20130731
Length = 576
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/496 (78%), Positives = 423/496 (85%), Gaps = 5/496 (1%)
Query: 59 WPILKASVSKRLNSDDKENQHESHLEDSKFTSIGLQISDV--DMMKERFAKLLLGEDMSG 116
+PI KA++SK SD+KEN+ S ++D K TSI +IS DMMKERFAKLLLGEDMSG
Sbjct: 42 FPIRKATMSKCSKSDEKENEPVSQVDDKKVTSISSKISGSGGDMMKERFAKLLLGEDMSG 101
Query: 117 SGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPS 176
SGKGV TALAISNAITNLC T FGQLWRLEP+P EKKE W+REM+WL+ V DHIVEL+PS
Sbjct: 102 SGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWLLCVGDHIVELMPS 161
Query: 177 WQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAQDAD 236
WQT+PDGSK EVMTCRPR DIFINLPALRKLDNMLLEILDS TA EFWYVDQGIVA DAD
Sbjct: 162 WQTYPDGSKQEVMTCRPRSDIFINLPALRKLDNMLLEILDSCTAMEFWYVDQGIVAPDAD 221
Query: 237 GSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQILKAAMAINSTALAE 296
GSASFRK QRQEEKWWLPVPRVPPAGLSE+SRKKLNH+RE A+QILKAAM+INS AL E
Sbjct: 222 GSASFRKRNQRQEEKWWLPVPRVPPAGLSENSRKKLNHTRESASQILKAAMSINSIALDE 281
Query: 297 MEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAI 356
MEVPESYL+ LPKNGRTCLGDFIYRYITSDQFS ECLLDC+DIS+EHVALEIANR+EAAI
Sbjct: 282 MEVPESYLDTLPKNGRTCLGDFIYRYITSDQFSQECLLDCIDISNEHVALEIANRLEAAI 341
Query: 357 YVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKRELLADRAENILLSLKQRFPGLSQ 416
YVW W+IVKDFMVDGDKRELLA+RAE+IL+SLKQRFPGLSQ
Sbjct: 342 YVWRRRSHSKPPLYPSRSTTKSSWDIVKDFMVDGDKRELLAERAESILISLKQRFPGLSQ 401
Query: 417 TTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYVDDLTKHSDKFALVPSTV 476
TTLDTSKIQCNKDVGKSILESYSRVLESMAFNI+ARIDDLLYVDDLTKHSD+F L P V
Sbjct: 402 TTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLAP-MV 460
Query: 477 NMASQKKVSCPSFSVSVSDTPRKSAVGTPRFSPAPLISPARGERTPFLNNNN-NIIKPHR 535
NM SQKKVS VSVSDT K+ GTP +SP PLISP++GE TPF++NNN NIIKP R
Sbjct: 461 NMVSQKKVS-QQLPVSVSDTQHKAKFGTPSYSPVPLISPSKGEITPFIHNNNSNIIKPQR 519
Query: 536 RGFGVRRVLSNYLGGE 551
RGFGV+RVLSNYLGGE
Sbjct: 520 RGFGVKRVLSNYLGGE 535
>Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:23784213-23780879 | 20130731
Length = 656
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/493 (65%), Positives = 383/493 (77%), Gaps = 6/493 (1%)
Query: 57 LGWPILKASVSKRLNSDDKENQHESHLEDSKFTSIGLQISDVDMMKERFAKLLLGEDMSG 116
LGW + + S S ++ D E+ + HL + +F +S+++MMKERFAKLLLGEDMSG
Sbjct: 144 LGWNVKEISESDCISVHDSEDGKKKHLVEKEFVKQVSALSEIEMMKERFAKLLLGEDMSG 203
Query: 117 SGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPS 176
G GV TALAISNAITNLCAT FGQLWRLEPL SEKK MWRREMEW +SVSDHIVEL P+
Sbjct: 204 CGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWFLSVSDHIVELTPN 263
Query: 177 WQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAQDAD 236
WQTFPDGSKLEVMTCRPR D+++NLPALRKLDNMLLEI DSF TEFWYVDQG++A DA
Sbjct: 264 WQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDTEFWYVDQGVIAPDAG 323
Query: 237 GS-ASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQILKAAMAINSTALA 295
S +SFR+ +QRQEEKWWLPVPRVPP GL E SRK+L H R+C +QILKAAMAINS LA
Sbjct: 324 TSPSSFRQALQRQEEKWWLPVPRVPPCGLHEKSRKQLQHKRDCTSQILKAAMAINSITLA 383
Query: 296 EMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAA 355
EM++PESYLE LPKN R LGD I+RYITSD FSPECLL CLD+SSEH A+EIANR EA+
Sbjct: 384 EMDIPESYLESLPKNARISLGDVIHRYITSDHFSPECLLACLDLSSEHQAIEIANRAEAS 443
Query: 356 IYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKRELLADRAENILLSLKQRFPGLS 415
+Y+W WE+VKD MVD DKREL A+RAE +LL+LKQRFPGL
Sbjct: 444 MYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMVDADKRELFAERAETLLLTLKQRFPGLP 503
Query: 416 QTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYVDDLTKHSDKFALVPST 475
QT LD SKIQ NKDVGK+ILESYSRVLES+AFN+++RIDD+LYVDDLTK+SD+F+ S
Sbjct: 504 QTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVSRIDDVLYVDDLTKNSDQFS-SHSK 562
Query: 476 VNMASQKKVSCPSFSVSVSDTPRKSAVGTPRFSPAPLISPARGERTPFLNNNNNIIKPHR 535
V + ++K +S P +SV V TP KSA GTP SPA ISP++G ++P LNN N K +
Sbjct: 563 VGVITRKSISVP-YSVPVPTTPYKSAFGTPTRSPAHAISPSKGGKSPLLNNGN---KTPQ 618
Query: 536 RGFGVRRVLSNYL 548
RG GV++ L+++L
Sbjct: 619 RGVGVKKSLTDFL 631
>Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC |
chr3:31131780-31127698 | 20130731
Length = 435
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/434 (73%), Positives = 347/434 (79%), Gaps = 9/434 (2%)
Query: 1 METLSNKSDVSQKKRDGVQS-CVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPLGW 59
METLS S QKK+DG +S CVT PLGW
Sbjct: 1 METLSKNS---QKKKDGSRSSCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTPLGW 57
Query: 60 PILKASVSKRLNS---DDKENQHESHLE--DSKFTSIGLQISDVDMMKERFAKLLLGEDM 114
PILKA++S S DDKEN+H+S++E +K T++ +++SDVDMMKERFAKLLLGEDM
Sbjct: 58 PILKATLSSSKRSCSSDDKENKHKSNMEVEHTKCTTMDVKVSDVDMMKERFAKLLLGEDM 117
Query: 115 SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELI 174
SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLP EKK+MW+REMEWLVSVSDHIVELI
Sbjct: 118 SGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWLVSVSDHIVELI 177
Query: 175 PSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAQD 234
PSWQTFPDG KLEVMTCRPR DI INLPALRKLDNMLLEILDSFTATEFWYVDQGIVA D
Sbjct: 178 PSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAAD 237
Query: 235 ADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQILKAAMAINSTAL 294
++GSASFRK+IQRQEEKWWLPVPRVP AGL E SRKKLNHSRE A+QILKAAM+INS AL
Sbjct: 238 SEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSRKKLNHSRESASQILKAAMSINSIAL 297
Query: 295 AEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDISSEHVALEIANRVEA 354
AEMEVPESYLE LPKNGRTCLGDFIYRYITSDQFS ECLLDCLD+SSEH+ALEIANRVEA
Sbjct: 298 AEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHIALEIANRVEA 357
Query: 355 AIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKRELLADRAENILLSLKQRFPGL 414
AIY+W W +VKDFM+DGDKRELLA RAENIL SLK RFPGL
Sbjct: 358 AIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKRELLAHRAENILSSLKHRFPGL 417
Query: 415 SQTTLDTSKIQCNK 428
+QTTLDTSKIQCNK
Sbjct: 418 TQTTLDTSKIQCNK 431
>Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:6266234-6262535 | 20130731
Length = 542
Score = 554 bits (1428), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/403 (66%), Positives = 320/403 (79%), Gaps = 5/403 (1%)
Query: 85 DSKFTSIGLQISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWR 144
+ + + + + + +++MMKERFAKLLLGEDMSGSG GV TALAISNAITNLCAT FGQLWR
Sbjct: 84 EKQVSVLPMPVLEIEMMKERFAKLLLGEDMSGSGNGVPTALAISNAITNLCATVFGQLWR 143
Query: 145 LEPLPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPAL 204
LEPL EKK MW+REMEWL+ VSDHIVE P+WQTFPDGS+ EVMTCRPR D++INLPAL
Sbjct: 144 LEPLSPEKKAMWQREMEWLLCVSDHIVEFKPTWQTFPDGSRFEVMTCRPRSDLYINLPAL 203
Query: 205 RKLDNMLLEILDSFTATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGL 264
RKLDNMLLEILDSF TEF YVDQG++A++ DGS+SF QRQEEKWWLPVP+VPP GL
Sbjct: 204 RKLDNMLLEILDSFVNTEFRYVDQGVMARNEDGSSSF----QRQEEKWWLPVPQVPPCGL 259
Query: 265 SEDSRKKLNHSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYIT 324
E+SRK+L H R+CANQI KAAMAIN+ LAEM+VP++YLE LPK R LGD IY++IT
Sbjct: 260 HENSRKQLQHKRDCANQISKAAMAINNITLAEMQVPDAYLESLPKTARGSLGDVIYKFIT 319
Query: 325 SDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVK 384
S+ FSPE LL L+ISSEH A++IANRVEA+IY+W W + K
Sbjct: 320 SEIFSPESLLASLEISSEHQAIKIANRVEASIYIWHKKTNSKPANRATRSSSRSSWGMFK 379
Query: 385 DFMVDGDKRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLES 444
D +V+GDK E+L +R E +LLSLKQ FP L QT+LD SKIQCNKDVGKSILESYSRVLES
Sbjct: 380 DLIVEGDKSEMLIERGETLLLSLKQHFPFLPQTSLDVSKIQCNKDVGKSILESYSRVLES 439
Query: 445 MAFNIIARIDDLLYVDDLTKHSDKFALVPSTVNMASQKKVSCP 487
+A NI+ARIDD+LYVD+LTKHSDKF+ + S V + + K +S P
Sbjct: 440 LASNIVARIDDVLYVDNLTKHSDKFSSL-SKVGVITTKSISVP 481
>Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC |
chr4:28908900-28905362 | 20130731
Length = 558
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/441 (58%), Positives = 306/441 (69%), Gaps = 10/441 (2%)
Query: 93 LQISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEK 152
L +++V+MMKERFAKLLLGEDMSG GKGVCTALAISNAITNL AT FG+LWRLEPL +K
Sbjct: 83 LDLTEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQK 142
Query: 153 KEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLL 212
K MWRREMEWL+ VSD IVEL+PS Q FP G EVM RPR D++INLPAL+KLD MLL
Sbjct: 143 KAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLL 202
Query: 213 EILDSFTATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKL 272
+LD F T+FWYVD+GIV D+ + + RQEEKWWLP P++PP GL ED RK+L
Sbjct: 203 SMLDGFCDTQFWYVDRGIVLGDSKDCDDYGRPSVRQEEKWWLPSPKLPPNGLCEDDRKRL 262
Query: 273 NHSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPEC 332
R+C NQILKAAMAINS+ LAEME+P +Y+E LP+NG+ CLGD IYRYIT+ QFS EC
Sbjct: 263 QQCRDCTNQILKAAMAINSSVLAEMEIPAAYVESLPRNGKACLGDIIYRYITAGQFSSEC 322
Query: 333 LLDCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXW-EIVKDFMVDGD 391
LLDCLD+SSEH +IANR+EAAI+VW W VK + DG+
Sbjct: 323 LLDCLDLSSEHHTQDIANRIEAAIHVW---RLKDYKKLKKSGKARRSWGGKVKSLVADGE 379
Query: 392 KRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIA 451
K L RAE +L SLK+RFPGL QT LD +KIQ NKDVG+SILESYSRV+ES+AFNI+A
Sbjct: 380 KNHFLVQRAETLLQSLKRRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMA 439
Query: 452 RIDDLLYVDDLTKHS---DKFALVPSTVNMASQKKVSCPSFSVSVSDTPRKSAVGTPRF- 507
RIDD+LYVDD K S D +K PS S+ TP S TP F
Sbjct: 440 RIDDVLYVDDTVKRSAAADSILFGRGGFGGLPIQKRMTPS-PFSIQHTPYASPFATPSFC 498
Query: 508 SPAPLI-SPARGERTPFLNNN 527
S +P+ SP RT + N
Sbjct: 499 SSSPVSGSPCSPRRTHDVKRN 519
>Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11477789-11473977 | 20130731
Length = 470
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/421 (53%), Positives = 289/421 (68%), Gaps = 27/421 (6%)
Query: 54 PAPLGWPILKASVS-KRLNSDDKENQHESHLEDSKFTSIGLQISDVDMMKERFAKLLLGE 112
P+P W +K + RL ++ H K + L S+++MMKERF+KLLLGE
Sbjct: 58 PSPSPWMNVKHGAALSRLGMKQRK-----HSLGEKSDDLDLLESELEMMKERFSKLLLGE 112
Query: 113 DMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVE 172
DMSG GKGVCTA+ ISN+ITNL AT FGQ +LEPL EKK MW+REM L+SV D+IVE
Sbjct: 113 DMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVCDYIVE 172
Query: 173 LIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVA 232
P+ Q DG+ +E+MT RPR DI+INLPAL+KLD ML+EI DSF TEFWY +QG ++
Sbjct: 173 FAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSMS 232
Query: 233 QDADGSA---------SFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQIL 283
+++ S+ SFR QR++EKWWLPVP V GLS+ SRK L R+CANQI
Sbjct: 233 GNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVHTGGLSDKSRKHLIEKRDCANQIH 292
Query: 284 KAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITS-DQFSPECLLDCLDISSE 342
KAAMAINS+ LAEM++PE+Y+ LPK+GR+ LGD IYRY+ S D+FSP LLDCL I +E
Sbjct: 293 KAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYMHSGDKFSPGNLLDCLKIRTE 352
Query: 343 HVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVD---GDKRELLADR 399
H ALE+A+RVE+++Y W W VK+ M + DK LLA+R
Sbjct: 353 HEALELADRVESSMYTW--------RRKSCLSHSKSSWNKVKELMAETDHSDKNYLLAER 404
Query: 400 AENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYV 459
AE +L LKQR+P LSQT+LDT KIQ N+DVGK++LESYSRVLE +AFNI+A I+D+L
Sbjct: 405 AETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAFNIVAWIEDVLCA 464
Query: 460 D 460
D
Sbjct: 465 D 465
>Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC |
chr8:11478040-11473877 | 20130731
Length = 470
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/421 (53%), Positives = 289/421 (68%), Gaps = 27/421 (6%)
Query: 54 PAPLGWPILKASVS-KRLNSDDKENQHESHLEDSKFTSIGLQISDVDMMKERFAKLLLGE 112
P+P W +K + RL ++ H K + L S+++MMKERF+KLLLGE
Sbjct: 58 PSPSPWMNVKHGAALSRLGMKQRK-----HSLGEKSDDLDLLESELEMMKERFSKLLLGE 112
Query: 113 DMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVE 172
DMSG GKGVCTA+ ISN+ITNL AT FGQ +LEPL EKK MW+REM L+SV D+IVE
Sbjct: 113 DMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVCDYIVE 172
Query: 173 LIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVA 232
P+ Q DG+ +E+MT RPR DI+INLPAL+KLD ML+EI DSF TEFWY +QG ++
Sbjct: 173 FAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSMS 232
Query: 233 QDADGSA---------SFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQIL 283
+++ S+ SFR QR++EKWWLPVP V GLS+ SRK L R+CANQI
Sbjct: 233 GNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVHTGGLSDKSRKHLIEKRDCANQIH 292
Query: 284 KAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITS-DQFSPECLLDCLDISSE 342
KAAMAINS+ LAEM++PE+Y+ LPK+GR+ LGD IYRY+ S D+FSP LLDCL I +E
Sbjct: 293 KAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYMHSGDKFSPGNLLDCLKIRTE 352
Query: 343 HVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVD---GDKRELLADR 399
H ALE+A+RVE+++Y W W VK+ M + DK LLA+R
Sbjct: 353 HEALELADRVESSMYTW--------RRKSCLSHSKSSWNKVKELMAETDHSDKNYLLAER 404
Query: 400 AENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYV 459
AE +L LKQR+P LSQT+LDT KIQ N+DVGK++LESYSRVLE +AFNI+A I+D+L
Sbjct: 405 AETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAFNIVAWIEDVLCA 464
Query: 460 D 460
D
Sbjct: 465 D 465
>Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC |
chr7:29297652-29300584 | 20130731
Length = 532
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/420 (52%), Positives = 272/420 (64%), Gaps = 64/420 (15%)
Query: 97 DVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMW 156
+++MMKERFAKLLLGEDMSG GKGV TA+ ISNAITNL AT FGQ +LEPL EKK MW
Sbjct: 113 ELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKIMW 172
Query: 157 RREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILD 216
+REM+ L+SV D+I E P+ Q DG+ +E+M RPR DI+INLPAL+KLD ML+EILD
Sbjct: 173 KREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILD 232
Query: 217 SFTATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSR 276
SF TEFWY + + +ASFR+ QR++EKWWLPVP V P GLSE SRK L R
Sbjct: 233 SFEDTEFWYAENVSASSPRLRAASFRRIAQRKDEKWWLPVPCVLPGGLSEKSRKHLTEKR 292
Query: 277 ECANQILKAAMAINSTALAEMEVPESYLEVLP---------------------------- 308
+CANQILKAAMAINS LA++++PE+Y++ LP
Sbjct: 293 DCANQILKAAMAINSNILADIDIPETYIDDLPQLKFYCQVIDDSFKCDPIRQMSWNLSSN 352
Query: 309 ------------------------KNGRTCLGDFIYRYI-TSDQFSPECLLDCLDISSEH 343
K+GR LGD IY+Y+ T D+FSPE LLDCL +SSEH
Sbjct: 353 FISLLWKPIIAAESCKKRDDIIPYKSGRGNLGDTIYQYMYTVDKFSPERLLDCLKLSSEH 412
Query: 344 VALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDG---DKRELLADRA 400
AL++A+RVE+++Y W W+ VKD M D DK +LADRA
Sbjct: 413 EALDLADRVESSMYTW--------RRKACLSHSKSSWKEVKDLMDDTDWKDKNYILADRA 464
Query: 401 ENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYVD 460
E +L SLKQR+P LSQT+LD KIQ NKDVGK++LESYSRVLE +AFN +A I+D+LYVD
Sbjct: 465 EALLFSLKQRYPELSQTSLDACKIQYNKDVGKAVLESYSRVLEGLAFNTVAWIEDVLYVD 524
>Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC |
chr6:32999908-32996320 | 20130731
Length = 549
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/414 (48%), Positives = 275/414 (66%), Gaps = 29/414 (7%)
Query: 96 SDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEM 155
++ D+MKERFAKLLLGEDMSG+G GV +ALA+SNAITNL A+ FG+ +LEP+ E+K
Sbjct: 95 TESDLMKERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFGEQSKLEPMSQERKTR 154
Query: 156 WRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEIL 215
WR+E+EWL+SV+DHIVE PS Q DGS +E+MT R R D+ +N+PALRKLD MLL+IL
Sbjct: 155 WRKEIEWLLSVTDHIVEFAPSQQLAKDGSTMEIMTTRQRSDLLMNIPALRKLDAMLLDIL 214
Query: 216 DSF-TATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNH 274
D+F EFWYV + +D A QR+ +KWWLP+ +VPP GLS+ + K +
Sbjct: 215 DNFRDQNEFWYVSK------SDEEAEGNTVTQRKSDKWWLPIVKVPPTGLSDVAVKWIQF 268
Query: 275 SRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLL 334
++ NQ+LKAAMAIN+ L+EME+P++Y+E LPKNGR LG+ IY+ IT + F P L
Sbjct: 269 EKDNVNQVLKAAMAINAQVLSEMEIPDNYIESLPKNGRESLGESIYKCITVEYFDPGQFL 328
Query: 335 DCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKRE 394
+D+++EH L++ NR+EA+I +W W + +KRE
Sbjct: 329 STMDMTTEHKVLDLKNRIEASIVIW---------KRKMNKDGKSSWSSA----ISMEKRE 375
Query: 395 LLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARID 454
L +RAE ILL +KQ FPGL Q++LD SKIQ NKDVG++ILESYSRV+ES+A+ +++RID
Sbjct: 376 LFEERAETILLMIKQEFPGLPQSSLDISKIQYNKDVGQAILESYSRVIESLAYTVLSRID 435
Query: 455 DLLYVDDLTKHSDKFALVPSTVNMASQKKVSCPSFSVSVSDTPRKSAVGTPRFS 508
D+LYVD +TK+ PS AS ++ S S +S +P G R S
Sbjct: 436 DVLYVDSMTKN-------PSLA--ASSRRFSLDSLPMSDQTSPNSEDSGIGRMS 480
>Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC |
chr2:43813630-43810264 | 20130731
Length = 533
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/367 (50%), Positives = 256/367 (69%), Gaps = 19/367 (5%)
Query: 95 ISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKE 154
+ +++ MKERFAKLLLGEDMSG GKGV +ALA+SNA TNL A+ FG+ RLEP+P+E+K
Sbjct: 84 LQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFGEQKRLEPMPAERKA 143
Query: 155 MWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEI 214
WR+E++ L+SV+D++VE++PS Q DG+ +E+MT R R D+ +N+PALRKLD ML E
Sbjct: 144 RWRKEIDLLLSVTDYVVEMVPSQQKSKDGTSMEIMTTRQRTDLHMNIPALRKLDAMLFEC 203
Query: 215 LDSFT-ATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLN 273
LD+F EF+YV + D D + + ++KWWLP P+VP GLS+ +RK L
Sbjct: 204 LDNFKDQNEFYYVSKDADDADGDNAKT------NSDDKWWLPTPKVPAEGLSDAARKFLQ 257
Query: 274 HSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECL 333
+ ++C NQ+LKAAMAIN+ L+EME+PE+Y+E LPKNGR CLGD YR IT + F P+
Sbjct: 258 YQKDCVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRACLGDAAYRSITVEFFDPDQF 317
Query: 334 LDCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDFMVDGDKR 393
L +D+SSEH +++ N++EA+I +W W V +KR
Sbjct: 318 LSTMDLSSEHKVVDLKNKIEASIVIW--------KRKMNQKDNKSAWGSA----VSLEKR 365
Query: 394 ELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARI 453
EL +RAE ILL +K RFPG+ Q++LD SKIQ N+DVG ++LESYSR+LES+AF +++RI
Sbjct: 366 ELFEERAETILLLIKHRFPGIPQSSLDISKIQFNRDVGHAVLESYSRILESLAFTVLSRI 425
Query: 454 DDLLYVD 460
DD+L VD
Sbjct: 426 DDVLQVD 432
>Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC |
chr5:10622248-10613821 | 20130731
Length = 558
Score = 335 bits (858), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 239/379 (63%), Gaps = 10/379 (2%)
Query: 82 HLEDSKFTSIGLQISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQ 141
H + S +Q SD++ MKE F+KLLLGED++G KG+ TALA+SNAITNL T FG+
Sbjct: 103 HFHVKEKPSYAIQHSDIEAMKENFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGE 162
Query: 142 LWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINL 201
LW+LEPL E+K WRREM+WL+S ++++VEL+P+ Q +G E+MT + R DI +NL
Sbjct: 163 LWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNL 222
Query: 202 PALRKLDNMLLEILDSFTATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPP 261
PAL+KLD ML++ LDS TEFWY + G + D S R ++WWLP P+VP
Sbjct: 223 PALQKLDCMLIDALDSMVKTEFWYGEGGSRTEGKDMSV-------RHSKRWWLPSPQVPK 275
Query: 262 AGLSEDSRKKLNHSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYR 321
GLS+ RK+L H + Q+ KAA +IN L EM VP + L K+G+ LG +++
Sbjct: 276 TGLSDTERKRLVHQGKVVRQVFKAAKSINDNVLLEMPVPMVIRDALAKSGKANLGQELHK 335
Query: 322 YITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWE 381
+T++ S E ++ L++ SEH+ALE N++EA I+ W
Sbjct: 336 VLTAESTSGEDMIKSLNLKSEHMALETINKLEAVIF---SLKERTMEQVTGKSPVRTSWS 392
Query: 382 IVKDFMVDGDKRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRV 441
VK M + DK ELL DRAE +L LK R+P L QT LD +K+Q KD+G SI+E+YSRV
Sbjct: 393 FVKGPMSEADKLELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSIMEAYSRV 452
Query: 442 LESMAFNIIARIDDLLYVD 460
L ++AF+I++RI D+L D
Sbjct: 453 LGNLAFSILSRIGDILQED 471
>Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC |
chr4:3547567-3550746 | 20130731
Length = 400
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 219/319 (68%), Gaps = 21/319 (6%)
Query: 148 LPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKL 207
+P E+K WR+E++WL+SV+D++VE++P+ Q DGS +E+MT R R D+ +N+PALRKL
Sbjct: 1 MPPERKARWRKEIDWLLSVTDYVVEMVPTQQKSKDGSIMEIMTTRQRTDLHMNIPALRKL 60
Query: 208 DNMLLEILDSFT-ATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSE 266
D ML++ LD+F +EF+YV + A D D S + ++KWWLP P+VP GLSE
Sbjct: 61 DAMLIDCLDNFKDQSEFYYVSKD--ADDPDRSNG------KNDDKWWLPTPKVPAEGLSE 112
Query: 267 DSRKKLNHSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITSD 326
+R+ L + ++C NQ+LKAAMAIN+ L+EME+PESY+E LPKNGR LGD IYR IT +
Sbjct: 113 AARRFLQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDIIYRNITDE 172
Query: 327 QFSPECLLDCLDISSEHVALEIANRVEAAIYVWXXXXXXXXXXXXXXXXXXXXWEIVKDF 386
F P+ L +D+SSEH L++ NR+EA+I +W W
Sbjct: 173 FFDPDQFLGTIDMSSEHKILDLKNRIEASIVIW--------RRKMNQKDSKSAWGSA--- 221
Query: 387 MVDGDKRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMA 446
V +KREL +RAE ILL LK RFPGL Q++LD SKIQ N DVG+++LESYSR+LES+A
Sbjct: 222 -VSLEKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNGDVGQAVLESYSRILESLA 280
Query: 447 FNIIARIDDLLYVDDLTKH 465
F +++R++D+L+ D+ T++
Sbjct: 281 FTVLSRVEDVLHADNQTQN 299
>Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC |
chr5:10738291-10738789 | 20130731
Length = 100
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 139 FGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDG 183
FG+LW L+ L E+K WRR+M+WL+ ++++VEL+P+ Q +G
Sbjct: 13 FGELWNLKQLSEERKSKWRRKMDWLLPPTNYMVELVPAKQNNANG 57