Miyakogusa Predicted Gene

Lj2g3v2660400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2660400.1 tr|G7JL95|G7JL95_MEDTR DEM2 OS=Medicago
truncatula GN=MTR_4g086240 PE=4 SV=1,81.59,0,seg,NULL; FAMILY NOT
NAMED,NULL; Putative isomerase YbhE,NULL; VID27,Vacuolar
import/degradation, Vi,CUFF.39174.1
         (631 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086240.1 | vacuolar import/degradation, VID27-like protei...   953   0.0  
Medtr3g101680.1 | vacuolar import/degradation, VID27-like protei...   768   0.0  

>Medtr4g086240.1 | vacuolar import/degradation, VID27-like protein |
           HC | chr4:33764040-33760228 | 20130731
          Length = 627

 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/641 (74%), Positives = 514/641 (80%), Gaps = 28/641 (4%)

Query: 1   MGTSQSREGLEFTXXXX---------XXXXXXXXXXXXAQPSIPNQLDEVDAKLKALKLK 51
           MGTSQSREG EF+                         +  S    LD+VDAKL ALKLK
Sbjct: 1   MGTSQSREGREFSDSDSDYDEQEPEQEEDQDQYQDAQSSSQSHSTNLDDVDAKLSALKLK 60

Query: 52  YXXXXXXXXXXXXXKTQTPLTRNAVKLYLHIGGNTPNAKWILSDKRTFYKFIKSXXXXXX 111
           Y             +T+TPL +NAVKLYLHIGGNTPNAKWILSDKRT Y F+K+      
Sbjct: 61  YSSPSKSQS-----ETKTPLPKNAVKLYLHIGGNTPNAKWILSDKRTSYAFVKNYEDEEE 115

Query: 112 XXXXXXXX-YWFLKVGSKVRARVSTEMQLKMFGDQRRVDFVSDGVWALKFLTDEFYRRFV 170
                     W LKVGSK+RARVSTE+QLKMFGDQRRVDFVS+GVWALKF TDE YR+FV
Sbjct: 116 DEQNDVAQGQWILKVGSKIRARVSTELQLKMFGDQRRVDFVSNGVWALKFPTDESYRKFV 175

Query: 171 TEFQDCMFENVYGLAATEENKLKVYGKEFIGWVKPEAADDSVWEDAVSDEXXXXXXXXXX 230
           TEFQ+C FENVYGL+ TEENK+KVYGKEFIGWVKPEAADDSVWEDAVSD+          
Sbjct: 176 TEFQNCTFENVYGLSPTEENKVKVYGKEFIGWVKPEAADDSVWEDAVSDDGSG------- 228

Query: 231 KTPE--RPRGDLMEEFEEAANGGVHTVTLGALDNSFLVNDTGVRVYRNFDRGIQDKGVAV 288
           K+PE  R RGDLMEEFEEAANGG+ T+TLGALDNSFL+ND G +VYRNFDRGI+ KGVAV
Sbjct: 229 KSPEPYRSRGDLMEEFEEAANGGIQTLTLGALDNSFLLNDAGFQVYRNFDRGIR-KGVAV 287

Query: 289 KFGGGGSLRGTTTPNKALLMRAETNMMLMSPLNSGKPHASRLHQMDIETGKIVTEWKFEK 348
           K+GG        TPNKALLMRAETNMMLMSP+NSG PHAS+L+Q+DIETGKIVTEWKFEK
Sbjct: 288 KYGGN---LQQETPNKALLMRAETNMMLMSPMNSGMPHASKLNQLDIETGKIVTEWKFEK 344

Query: 349 DGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMREKKGMVQNIAGSGSPVLHWS 408
           DGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMR++KG+VQNIA + SPVLHW+
Sbjct: 345 DGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGIVQNIATANSPVLHWN 404

Query: 409 QGHQFSRGTNFQCFATTXXXXXXXXXXXXKIRLYSKTSMRMAKTAFPGLGSPITSVDVTF 468
           QGHQFSRGTNFQCFATT            KIRLYS  SMRMAKTAFPGLGSPITSVDVTF
Sbjct: 405 QGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSNKSMRMAKTAFPGLGSPITSVDVTF 464

Query: 469 DGKWVLGTTDTYLVLICTLXXXXXXXXXXXXXXRMGNKIGAPRLLKLTPLDSHLAGTGNK 528
           DGKWVLGTTDTYLVLICTL              RMGN+IGAPRLLKLTPLDSHLAGT NK
Sbjct: 465 DGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGTTNK 524

Query: 529 FHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLK 588
           FHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLK
Sbjct: 525 FHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLK 584

Query: 589 DESIVESRFMHDNFAVSDSPEAPLVVATPMKVSSISMSGKR 629
           DESI+ESRFMHDN+AVSDSPEAPLVVATPMKVSSISMSGKR
Sbjct: 585 DESIIESRFMHDNYAVSDSPEAPLVVATPMKVSSISMSGKR 625


>Medtr3g101680.1 | vacuolar import/degradation, VID27-like protein |
           HC | chr3:46814722-46811217 | 20130731
          Length = 637

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/612 (61%), Positives = 448/612 (73%), Gaps = 35/612 (5%)

Query: 35  PNQLDEVDAKLKALKLKYXXXXXXXXXXXXXKTQTPLTRNAVKLYLHIGGNTPNAKWILS 94
           P+ +DEV+AKLKALKLKY             K Q P   NAVKLYLHIGGN+PNAKW++S
Sbjct: 44  PSSVDEVEAKLKALKLKYAV-----------KNQNP---NAVKLYLHIGGNSPNAKWVIS 89

Query: 95  DKRTFYKFIKS----------XXXXXXXXXXXXXXYWFLKVGSKVRARVSTEMQLKMFGD 144
           +K T Y F+K+                        +W LK+GSK+R++V  EMQLK   D
Sbjct: 90  EKFTTYSFVKTRCVGGNSDDDEDEEEDGDDDADEGFWVLKIGSKIRSKVGGEMQLKTLAD 149

Query: 145 QRRVDFVSDGVWALKFLTDEFYRRFVTEFQDCMFENVYGLAATEENKLKVYGKEFIGWVK 204
           QRRVDF++ GVWA+KF T++ +  F+ +FQ+C FEN +G  AT+ENKLKVYGK+F+GW K
Sbjct: 150 QRRVDFIAKGVWAMKFFTEQDFDAFLVKFQNCTFENTHGYEATDENKLKVYGKDFLGWAK 209

Query: 205 PEAADDSVWEDAVSDEXXXXXXXXXXKTPERPRGDLMEEFEEAANGGVHTVTLGALDNSF 264
           PE AD+S+WEDA               TP R   DL EEFEEAANGG+ ++ LGALDNSF
Sbjct: 210 PEVADESMWEDA----DDSFSKSPGSATPVRASQDLREEFEEAANGGIQSLALGALDNSF 265

Query: 265 LVNDTGVRVYRNFDRGIQDKGVAVKFGGGGSLRGT---TTPNKALLMRAETNMMLMSPLN 321
           LV + G++V +NF  GI  KGV V FGGG S        TP K LLM+AET+M+LMSPL 
Sbjct: 266 LVGENGIQVVKNFATGIHGKGVFVNFGGGSSSTSKLVDCTPKKTLLMKAETSMLLMSPLG 325

Query: 322 SGKPHASRLHQMDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNR 381
             K H++ LHQ DIETGK+VTEW+F KDG +ITM+DITND+KG+QLDPS STFLGLDDNR
Sbjct: 326 ENKFHSTGLHQFDIETGKVVTEWRFGKDGTEITMKDITNDSKGAQLDPSGSTFLGLDDNR 385

Query: 382 LCQWDMREKKGMVQNIAGSGS----PVLHWSQGHQFSRGTNFQCFATTXXXXXXXXXXXX 437
           LC+WDMR++ G+VQ++A S S    PVL+W+QGHQFSRGTNFQCFATT            
Sbjct: 386 LCRWDMRDRHGIVQDLADSNSNMSTPVLNWAQGHQFSRGTNFQCFATTGDGSVVVGSLDG 445

Query: 438 KIRLYSKTSMRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLXXXXXXXXXX 497
           KIRLYS  SMR AKTAFPGLGSP+T+VDVTFDGKW++GTTDTYLV+ICT+          
Sbjct: 446 KIRLYSINSMRQAKTAFPGLGSPVTNVDVTFDGKWIVGTTDTYLVVICTVFTDKDGKTKN 505

Query: 498 XXXXRMGNKIGAPRLLKLTPLDSHLAGTGNKFHGGHFSWVTENGKQERHLVATVGKFSVI 557
               RMGN I APRLLKL PLDSHLAG  NKF    FSWVTENGKQERH+VATVGKFSVI
Sbjct: 506 GFAGRMGNNIAAPRLLKLNPLDSHLAGVNNKFQKAQFSWVTENGKQERHIVATVGKFSVI 565

Query: 558 WDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDNFAVSDSPEAPLVVATP 617
           W+FQQVK+ +H+CYR+QQGLKSCYCYKIVL+D+SIVESRFMHD FAV+DSPEAPLV+ATP
Sbjct: 566 WNFQQVKDGSHDCYRSQQGLKSCYCYKIVLRDDSIVESRFMHDKFAVTDSPEAPLVIATP 625

Query: 618 MKVSSISMSGKR 629
           MKVSS SMS +R
Sbjct: 626 MKVSSFSMSNRR 637