Miyakogusa Predicted Gene
- Lj2g3v2659380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2659380.1 Non Characterized Hit- tr|I1JI29|I1JI29_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4782
PE=,82.69,0,coiled-coil,NULL; seg,NULL; WD40 repeats,WD40 repeat; WD40
repeat-like,WD40-repeat-containing domain,CUFF.39166.1
(777 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g081240.1 | transducin/WD-like repeat-protein | HC | chr5:... 1168 0.0
Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr... 65 3e-10
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 62 2e-09
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 61 3e-09
Medtr7g076230.1 | periodic tryptophan protein | HC | chr7:286742... 61 3e-09
Medtr4g071130.1 | coatomer subunit alpha-like protein | HC | chr... 60 7e-09
Medtr2g059200.1 | transducin family protein/WD-40 repeat protein... 57 6e-08
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 51 4e-06
Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protei... 51 4e-06
Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor |... 50 6e-06
Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor |... 50 6e-06
>Medtr5g081240.1 | transducin/WD-like repeat-protein | HC |
chr5:34795701-34804210 | 20130731
Length = 796
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/799 (73%), Positives = 654/799 (81%), Gaps = 25/799 (3%)
Query: 1 MALLSASGGDTVKLFD--------ASVKPG-DPCTLSFTPSPGSQVHSVKWNHTNLVVAS 51
M+LL+ SGGDTVKLFD +SVKPG DPCTLSFTP+ G QV+SVKWNHTNLVVAS
Sbjct: 1 MSLLATSGGDTVKLFDVSGKLFDSSSVKPGGDPCTLSFTPTSGFQVNSVKWNHTNLVVAS 60
Query: 52 AGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKASRYICSGGSGQVVRIW 111
AGDDKRISLWRKNG SMGTIP+AG DS DN EESI AISFSNKASRY+CSGGSGQVV+IW
Sbjct: 61 AGDDKRISLWRKNGQSMGTIPVAGMDSVDNNEESILAISFSNKASRYVCSGGSGQVVKIW 120
Query: 112 DLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLASGQRAAELKDPNQQV 171
DLQ+KRCIKWLKGHTNT+TGVMYNCKDE+LASISLSGDLILH+LASGQRAAELKDPNQQ+
Sbjct: 121 DLQKKRCIKWLKGHTNTVTGVMYNCKDEHLASISLSGDLILHNLASGQRAAELKDPNQQM 180
Query: 172 LRVLDYSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSNDKIIAS 231
LRVLDYSRV+RHLL TAGD+GTVHLWDTTGRSPKVSW+KQHSAPTAGISFSPSNDKIIAS
Sbjct: 181 LRVLDYSRVSRHLLTTAGDDGTVHLWDTTGRSPKVSWLKQHSAPTAGISFSPSNDKIIAS 240
Query: 232 VGLDKKLYTYDIGSRRPSSCISYESPFSSLAFRDDGWMLAAGTGNGRVAFYDVRGKPQPF 291
VGLDKKLYTYD GSRRP+SCIS E+PFSSLAFRDDGWMLAAGT NGRVAFYDVRGKPQPF
Sbjct: 241 VGLDKKLYTYDSGSRRPTSCISCEAPFSSLAFRDDGWMLAAGTSNGRVAFYDVRGKPQPF 300
Query: 292 VVLHAFGSSEAVTSLCWQRSKPVTIDERNCSAETALVGDSIEDSILMPDXXXXXXXXXXX 351
VLHA+GSSEAVTSLCWQRSKPV +DERNC+AE ALVGDS+EDSILMPD
Sbjct: 301 GVLHAYGSSEAVTSLCWQRSKPVIVDERNCTAEIALVGDSVEDSILMPDPLPSATSSSIS 360
Query: 352 XXXXXXGTRNPGRLGASVEASSLIASNSVFTSNMHNVSNAEETPHRNHLWPGGTLSRLHA 411
T N GRL S++ SSL S+ F +++ NVS EETP RNHLWPGGTLSRLHA
Sbjct: 361 QSTSVSSTWNSGRLSTSIDTSSLATSSGGFITSLQNVSTGEETPLRNHLWPGGTLSRLHA 420
Query: 412 PRGSYNLKDDMEVFSPLLVVQPITPSLWNESGPKKDSLYADRKSLLFPSSIRRFPNSEEG 471
PRGSYN KDDMEVFSP++ V P+TPSLW+E+G KKDSL++DRK +LFPS+ RRFP+SE+
Sbjct: 421 PRGSYNFKDDMEVFSPIVDVTPLTPSLWDENGVKKDSLFSDRKPMLFPSASRRFPSSEDV 480
Query: 472 ISDNPISDWKSVSTAKQDIIQSSFPLVGSTPPPSSKSEDSSITPPEAWGGEKLTDKYTYP 531
SD+ I+DWKS TAKQDI QSSFPLVG TPP S+KSE+SSITPPEAWGGEKL DKYTY
Sbjct: 481 SSDHSIADWKSGPTAKQDITQSSFPLVGLTPPASAKSEESSITPPEAWGGEKLPDKYTYT 540
Query: 532 NQP-----------SAGQTAGSMLSGMQDTPXXXXXXXXXXXXXXXANLRAKDASASQET 580
QP S+GQTAGSM+SG+QDT +NLR KD S QET
Sbjct: 541 RQPVNAPSRFGMLASSGQTAGSMISGLQDTFSSSGISSYTSSSLNFSNLRTKDVSTGQET 600
Query: 581 SSGFTDHTFSTSLPLSINTKASLGQANTDSPRILDSPRM-SFPRR-STYAERISTTSTFS 638
S GFTDH FSTS+PLSI+TK SLGQAN DSP+I DSPRM SF +R S+YAERI T S+F
Sbjct: 601 SLGFTDHLFSTSMPLSISTKTSLGQANIDSPKISDSPRMSSFSKRISSYAERIGTASSFG 660
Query: 639 DGVSLSVGSPKIKKSGAETKEDLLNSLLLKSDIAALAESGSLPLTNGILXXXXXXXXXXX 698
DG SVGSPKIKKSGAET+E+LLNSLLLKSD++ ESGSL L NG +
Sbjct: 661 DGA--SVGSPKIKKSGAETREELLNSLLLKSDVSIPTESGSLLLPNGTI-PQQKASQSDA 717
Query: 699 XXXXFTLQLFQRTLEETLDSFQRSIHGDIRNLHVEVLRQFHLQETEMSTMMKSILENQAE 758
FTLQLFQRTL ETLDSFQ+SIH D+RN+H+E+LRQFHLQE EMST M SILENQAE
Sbjct: 718 QGSSFTLQLFQRTLNETLDSFQKSIHEDVRNVHLEILRQFHLQEMEMSTAMNSILENQAE 777
Query: 759 LMKEVKLLRKENQQLRQML 777
L+KEVK LRKEN+QLRQ+L
Sbjct: 778 LLKEVKSLRKENEQLRQLL 796
>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
chr1:40855860-40850967 | 20130731
Length = 1216
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 43/287 (14%)
Query: 37 VHSVKWNHTNLVVASAGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKAS 96
V V ++++ + S GDD +I +W H L D I + F ++ S
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDY-------IRTVQFHHE-S 105
Query: 97 RYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLA 156
+I S Q +RIW+ Q + CI L GH + + +++ KD+ + S SL + + +
Sbjct: 106 PWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKDDLVVSASLDQTVRVWDIG 165
Query: 157 SGQRAAELKDPNQQVLR--------------VLDYSRVNRH--------------LLVTA 188
S +R + P +LR V+ Y + H L+V+A
Sbjct: 166 SLKRKS--ASPADDILRLGQMNTDLFGGVDAVVKYV-LEGHDRGVNWASFHPTLPLIVSA 222
Query: 189 GDEGTVHLWDTTG-RSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYTYDIGSRR 247
D+ V +W ++ +V ++ H + + F D II S DK + +D R
Sbjct: 223 ADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQD-IIVSNSEDKSIRIWDATKRT 281
Query: 248 PSSCISYESP-FSSLAFRDDGWMLAAGTGNGRVAFYDVRGKPQPFVV 293
E F L+ + +LAAG +G + F R +P FVV
Sbjct: 282 GIQTFRREHDRFWILSAHPEMNLLAAGHDSGMIVFKLERERP-AFVV 327
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 37 VHSVKWNHTNLVVASAGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKAS 96
V VK+++ ++ASA DK + ++ S T+ L +G + E I+ I++S+ S
Sbjct: 30 VSCVKFSNDGNLLASASLDKTLIIY-----SSTTLSLLHRLTGHS--EGINDIAWSSD-S 81
Query: 97 RYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLA 156
YICS + +RIWD C+K L+GH + + V +N + Y+ S S + + +
Sbjct: 82 HYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFDETVRVWEVK 141
Query: 157 SGQRAAELKDPNQQVLRVLDYSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPT 216
+G+ +K V V D++R + L+V+ +G+ +WDT + + +
Sbjct: 142 TGKSVHVIKAHAMPVTSV-DFNR-DGSLIVSGSHDGSCKIWDTNSGALLKTLIDDKVPAV 199
Query: 217 AGISFSPSNDKI-IASVGLDKKLYTYDIG 244
+ FSP+ I +A++ KL+ Y G
Sbjct: 200 SFAKFSPNGKFILVATLNDTLKLWNYAAG 228
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 90 SFSNKASRYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGD 149
+FS RYI SG + + +WDLQ+K I+ L+GHT+T+ V + K+ +AS L GD
Sbjct: 247 TFSVTNGRYIVSGSEDRCLYLWDLQQKNMIQKLEGHTDTVISVTCHPKENKIASAGLDGD 306
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 15/251 (5%)
Query: 3 LLSASGGDTVKLFDASVKPGDPCTLSFTPSPGSQVHS-----VKWNHTNLVVASAGDDKR 57
L S+S T++ + + D +L+ +P + H + ++ + + SA DDK
Sbjct: 42 LASSSADKTLRTYGFTNSDSDSNSLTLSPMQQYEGHQHGVSDLAFSSDSRYLVSASDDKT 101
Query: 58 ISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKASRYICSGGSGQVVRIWDLQRKR 117
I LW + T L T G + ++F N S I SG + VR+WD++ +
Sbjct: 102 IRLW-----DVPTGSLVKTLHGHT--NYVFCVNF-NPQSNVIVSGSFDETVRVWDVKSGK 153
Query: 118 CIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLASGQRAAELKDPNQQVLRVLDY 177
C+K L H++ +T V +N + S S G + ++G L D + + +
Sbjct: 154 CLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTGHCIKTLIDDENPPVSYVKF 213
Query: 178 SRVNRHLLVTAGDEGTVHLWD-TTGRSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDK 236
S + +LV D + LW+ +TG+ K +S SFS +N K + D
Sbjct: 214 SPNAKFILVGTLDNN-LRLWNYSTGKFLKTYTGHVNSKYCISSSFSITNGKYVVGGSEDN 272
Query: 237 KLYTYDIGSRR 247
+Y + + SR+
Sbjct: 273 CIYLWGLQSRK 283
>Medtr7g076230.1 | periodic tryptophan protein | HC |
chr7:28674290-28681135 | 20130731
Length = 880
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 86 ISAISFSNKASRYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASIS 145
++ +++S + S+ + +G V++W + C HTN +T + + + L S S
Sbjct: 372 VNCVAYS-QDSQLLATGADDNKVKVWTVSSGFCFVTFSEHTNAVTALHFMASNNCLLSAS 430
Query: 146 LSGDLILHSLASGQRAAELKDPNQQVLRVLDYSRVNRHLLVTAGDEGTVHLWDT-TGRSP 204
L G + L + P+ + L + + D + +W TGR
Sbjct: 431 LDGTIRAWDLVRYRNFRTFTTPSSRQFVSLAADQSGEVICAGTSDSFEIFVWSMRTGRLL 490
Query: 205 KVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYTYDIGSRRPS-SCISYESPFSSLAF 263
V + H AP G+ FSP+N ++AS DK + +D+ + + + ++ F
Sbjct: 491 DV--LSGHEAPVHGLVFSPTN-AVLASSSWDKTVRLWDVFDGKGAVETWPHTHDVLTVVF 547
Query: 264 RDDGWMLAAGTGNGRVAFYD 283
R DG LA T +G++ F+D
Sbjct: 548 RPDGKQLACSTLDGQIYFWD 567
>Medtr4g071130.1 | coatomer subunit alpha-like protein | HC |
chr4:26807943-26801111 | 20130731
Length = 1206
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 37 VHSVKWNHTNLVVASAGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKAS 96
V V ++++ + S GDD +I +W H L D I + F ++ +
Sbjct: 54 VRGVHFHNSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDY-------IRTVQFHHE-N 105
Query: 97 RYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLA 156
+I S Q +RIW+ Q + CI L GH + + ++ K++ + S SL + + +
Sbjct: 106 PWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVRVWDIG 165
Query: 157 SGQRAAELKDPNQQVLR--------------VLDYSRVNRH--------------LLVTA 188
S +R A P+ +LR V+ Y + H L+V+
Sbjct: 166 SLKRKA--GPPSDDILRLSQMNTDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSG 222
Query: 189 GDEGTVHLWDTTG-RSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYTYDIGSRR 247
D+ V LW ++ +V ++ H + + F D II S DK + +D R
Sbjct: 223 ADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQD-IIVSNSEDKSIRVWDATKRT 281
Query: 248 PSSCISYESP-FSSLAFRDDGWMLAAGTGNGRVAFYDVRGKP 288
E F L+ + +LAAG +G + F R +P
Sbjct: 282 GIQTFRREHDRFWILSTHPEMNLLAAGHDSGMIVFKLERERP 323
>Medtr2g059200.1 | transducin family protein/WD-40 repeat protein |
HC | chr2:24447545-24441827 | 20130731
Length = 953
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 12/227 (5%)
Query: 66 HSMGTIPLAGTDSGDNIEE---SISAISFSNKASRYICSGGSGQVVRIWDLQRKRCIKWL 122
HS+ G + NI I +++F+ K S + + G + +++ + + L
Sbjct: 84 HSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGS-MLAAAGDDEGIKLINTVDGSIARVL 142
Query: 123 KGHTNTITGVMYNCKDEYLASISLSGDLILHSLASGQRAAELKD--PNQQV----LRVLD 176
KGH +TG+ ++ EYLAS+ G +I+ L SG+ LK P+ + + VL
Sbjct: 143 KGHKGPVTGLAFDPNGEYLASLDSIGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLC 202
Query: 177 YSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDK 236
+S + L G + V ++D + H+ P + +SP N K +A+ LDK
Sbjct: 203 WSP-DGETLAIPGLKNDVVMYDRDTAEKLFTLRGDHTQPICFLCWSP-NGKYMATSSLDK 260
Query: 237 KLYTYDIGSRRPSSCISYESPFSSLAFRDDGWMLAAGTGNGRVAFYD 283
++ +D+ ++ ++ + ++ G LA G+ +D
Sbjct: 261 QILIWDVDKKQDIDRQKFDERVCCMTWKPIGNALAVIDVMGKYGIWD 307
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 48 VVASAGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISFSNKASRYICSGGSGQV 107
+ + GDD +++LW G L+G S + +++F + + +G + V
Sbjct: 30 LFVTGGDDHKVNLW-TIGKPTSLSSLSGHTS------PVESVTF-DSGEVLVLAGSTSGV 81
Query: 108 VRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDL-ILHSLASGQRAAELKD 166
+R+WDL+ + ++ + GH + T V ++ E+ AS S+ +L I + G
Sbjct: 82 IRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWDNRKKG--CIHTYK 139
Query: 167 PNQQVLRVLDYSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSND 226
+ Q + + ++ R +V+ G + V +WD T + H + F P +
Sbjct: 140 GHSQGISTIKFTPDGR-WVVSGGFDNVVKVWDLTA-GKLLHDFNFHDGHITSLDFHPL-E 196
Query: 227 KIIASVGLDKKLYTYDIGS-------RRPSSCISYESPFSSLAFRDDGWMLAAGTGNGRV 279
++A+ D+ + +D+ S RR ++ + S+AF DG L +G +G
Sbjct: 197 FLLATGSADRTVKFWDLESFELIGSARREATGV------RSMAFHPDGRTLFSGHEDGLK 250
Query: 280 AF 281
F
Sbjct: 251 VF 252
>Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190941-3179834 | 20130731
Length = 1111
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 33/258 (12%)
Query: 38 HSVKWNHTNL------VVASAGDDKRISLWRKNGHSMGTIPLAGTDSGDNIEESISAISF 91
HS N N+ + + GDD +++LW G L+G S + +++F
Sbjct: 14 HSSNVNCLNIGKKACRLFVTGGDDHKVNLW-TIGKPTSLSSLSGHTS------PVESVTF 66
Query: 92 SNKASRYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDL- 150
+ + +G + V+R+WDL+ + ++ + GH + T V ++ E+ AS S+ +L
Sbjct: 67 -DSGEVLVLAGSTSGVIRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLK 125
Query: 151 ILHSLASGQRAAELKDPNQQVLRVLDYSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMK 210
I + G + Q + + ++ R +V+ G + V +WD T +
Sbjct: 126 IWDNRKKG--CIHTYKGHSQGISTIKFTPDGR-WVVSGGFDNVVKVWDLTA-GKLLHDFN 181
Query: 211 QHSAPTAGISFSPSNDKIIASVGLDKKLYTYDIGS-------RRPSSCISYESPFSSLAF 263
H + F P + ++A+ D+ + +D+ S RR ++ + S+AF
Sbjct: 182 FHDGHITSLDFHPL-EFLLATGSADRTVKFWDLESFELIGSARREATGV------RSMAF 234
Query: 264 RDDGWMLAAGTGNGRVAF 281
DG L +G +G F
Sbjct: 235 HPDGRTLFSGHEDGLKVF 252
>Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 12/245 (4%)
Query: 4 LSASGGDTVKLFDASVKPGDPCTLSFTPSPGSQVHSVKWN--HTNLVVASAGDDKRISLW 61
++A +VKL+D ++ P SF +VHSV +N + +++A DD + LW
Sbjct: 78 VAAVADGSVKLYDLALPPTSNPIRSFHEH-TREVHSVDYNPVRRDSFLSAAWDDT-VKLW 135
Query: 62 RKNGHSMGTIPLAGTDSGDNIEESISAISFSNKASRYICSGGSGQVVRIWDLQRKRCIKW 121
+ P + ++ S++ A + + G V RIWD++
Sbjct: 136 TVDR------PTSVRTFKEHAYCVYSSVWNPRHADVFASASGDCTV-RIWDVREPGSTMI 188
Query: 122 LKGHTNTITGVMYNCKDE-YLASISLSGDLILHSLASGQRAAELKDPNQQVLRVLDYSRV 180
L H + I +N DE +A+ S+ + + + S + + + + +R + +S
Sbjct: 189 LPAHEHEILSCDWNKYDECIIATGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPH 248
Query: 181 NRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYT 240
R+LLV+ + TV +WD VS H+ G+ S + ++AS G D+ +Y
Sbjct: 249 VRNLLVSCSYDMTVCVWDFMVEDALVSRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 308
Query: 241 YDIGS 245
+ G+
Sbjct: 309 WQHGT 313
>Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 12/245 (4%)
Query: 4 LSASGGDTVKLFDASVKPGDPCTLSFTPSPGSQVHSVKWN--HTNLVVASAGDDKRISLW 61
++A +VKL+D ++ P SF +VHSV +N + +++A DD + LW
Sbjct: 78 VAAVADGSVKLYDLALPPTSNPIRSFHEH-TREVHSVDYNPVRRDSFLSAAWDDT-VKLW 135
Query: 62 RKNGHSMGTIPLAGTDSGDNIEESISAISFSNKASRYICSGGSGQVVRIWDLQRKRCIKW 121
+ P + ++ S++ A + + G V RIWD++
Sbjct: 136 TVDR------PTSVRTFKEHAYCVYSSVWNPRHADVFASASGDCTV-RIWDVREPGSTMI 188
Query: 122 LKGHTNTITGVMYNCKDE-YLASISLSGDLILHSLASGQRAAELKDPNQQVLRVLDYSRV 180
L H + I +N DE +A+ S+ + + + S + + + + +R + +S
Sbjct: 189 LPAHEHEILSCDWNKYDECIIATGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPH 248
Query: 181 NRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYT 240
R+LLV+ + TV +WD VS H+ G+ S + ++AS G D+ +Y
Sbjct: 249 VRNLLVSCSYDMTVCVWDFMVEDALVSRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 308
Query: 241 YDIGS 245
+ G+
Sbjct: 309 WQHGT 313