Miyakogusa Predicted Gene

Lj2g3v2658300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2658300.1 tr|D7KDK7|D7KDK7_ARALL Mitochondrial glycoprotein
family protein OS=Arabidopsis lyrata subsp. lyrata,33.66,7e-19,no
description,Mitochondrial glycoprotein; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; MAM33,Mi,CUFF.39163.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g080880.1 | glycoprotein family protein | HC | chr5:346392...   360   1e-99
Medtr5g080870.1 | glycoprotein family protein | LC | chr5:346336...   229   2e-60
Medtr7g063520.1 | glycoprotein family protein | HC | chr7:231645...   206   2e-53
Medtr4g006560.1 | glycoprotein family protein | HC | chr4:678633...    93   2e-19
Medtr1g013120.1 | glycoprotein family protein | HC | chr1:285829...    77   1e-14
Medtr7g091050.1 | glycoprotein family protein | HC | chr7:359180...    62   5e-10
Medtr7g091050.2 | glycoprotein family protein | HC | chr7:359180...    62   7e-10
Medtr5g093000.1 | glycoprotein family protein | HC | chr5:406019...    59   4e-09

>Medtr5g080880.1 | glycoprotein family protein | HC |
           chr5:34639263-34644206 | 20130731
          Length = 331

 Score =  360 bits (923), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 181/257 (70%), Positives = 205/257 (79%), Gaps = 5/257 (1%)

Query: 1   MAFNSILR-KSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVA 59
           MAFNSILR KSS  +R+F++A QLI+KTQPGHRA L AAVN   R+Q S VP FHFSSV+
Sbjct: 1   MAFNSILRSKSSTFVRAFSSATQLIRKTQPGHRAVLSAAVN---RYQGSFVPTFHFSSVS 57

Query: 60  VKNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGE 119
           VKNK TSD+ LLR IESEITCA+ETDD  A E++P NFPFKIVDNPGNQTITL+RTYQGE
Sbjct: 58  VKNKATSDDILLRFIESEITCAQETDDFGAGEEVPSNFPFKIVDNPGNQTITLKRTYQGE 117

Query: 120 EIKVQVDMPDLVT-XXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDE 178
           EI+V+V MPDLVT              SERA            KK GP LEFSC+AY DE
Sbjct: 118 EIQVEVHMPDLVTGEEHDHQDDDKDDESERATQSSIPLSVSVSKKDGPSLEFSCVAYPDE 177

Query: 179 IVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINK 238
           IVIDSLSVKNP+ S++QI Y+GPDFQDLDE+LQKSFHKYLEIRGIKPSTTNFLHEYMINK
Sbjct: 178 IVIDSLSVKNPDFSDEQIPYDGPDFQDLDEALQKSFHKYLEIRGIKPSTTNFLHEYMINK 237

Query: 239 DSKEYLVWLKKVKSFIQ 255
           DS+EYLVWL K+K+FI+
Sbjct: 238 DSREYLVWLNKLKNFIK 254


>Medtr5g080870.1 | glycoprotein family protein | LC |
           chr5:34633631-34637278 | 20130731
          Length = 337

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/256 (51%), Positives = 159/256 (62%), Gaps = 36/256 (14%)

Query: 1   MAFNSILRKSSPLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDSVVPRFHFSSVAV 60
           MAFNSILR                KKTQPGHRA L   +N   R++ S VP+F+FSSVA+
Sbjct: 1   MAFNSILRS---------------KKTQPGHRAVLSTTIN---RYEGSFVPKFNFSSVAI 42

Query: 61  KNKPTSDETLLRVIESEITCAEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEE 120
           KN+P SDETLL +IES+ITC +ETD+   EE +P NFPFKIV+NP NQTI L+RTYQGE+
Sbjct: 43  KNEPNSDETLLCLIESKITCTQETDEFRGEE-VPSNFPFKIVENPRNQTIILKRTYQGEK 101

Query: 121 IKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIV 180
           I+V+V M DLVT             SERA            KK G  LEF C AY DE+V
Sbjct: 102 IEVKVHMVDLVTGEEHDKDDE----SERATQSSIDFSVSVSKKNGTSLEFCCDAYPDEMV 157

Query: 181 IDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDS 240
              L + N     +QI Y    +  LD      F  YLEIRGIKPSTTNFL EYMI + S
Sbjct: 158 FSGLFITN---RGEQIPY----YDRLD------FQYYLEIRGIKPSTTNFLQEYMIKRKS 204

Query: 241 KEYLVWLKKVKSFIQA 256
           +EYLVWL K+K+FI++
Sbjct: 205 REYLVWLNKLKNFIKS 220


>Medtr7g063520.1 | glycoprotein family protein | HC |
           chr7:23164570-23167810 | 20130731
          Length = 254

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/246 (47%), Positives = 153/246 (62%), Gaps = 10/246 (4%)

Query: 12  PLLRSFAAAGQLIKKTQPGHRAALFAAVNQLHRHQDS-VVPRFHFSSVAVKNKPTSDETL 70
           PLL   AAA      ++  H A    AVN L +++ +  VP   F+   +   P +D+TL
Sbjct: 16  PLLSRRAAA----TSSRTFHSAI---AVNLLRQNETTHFVPSRSFAYGVLAKTP-ADDTL 67

Query: 71  LRVIESEITCA-EETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTYQGEEIKVQVDMPD 129
           LRV+ SEI CA E+ D  SA  + P +FPF++ DNPG +TI L+R ++ E I VQVD+P+
Sbjct: 68  LRVLNSEIDCALEDNDSLSANLEFPGDFPFEVEDNPGERTIQLKRQFEDETITVQVDIPN 127

Query: 130 LVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSLSVKNP 189
           +               +E              K  G  +EF   A+ DE+VIDSLS+KNP
Sbjct: 128 VAPQQSEDEADPEKIENENDSESSIPLVVTVFKGNGVCMEFGVTAFPDEVVIDSLSIKNP 187

Query: 190 ELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEYLVWLKK 249
           + SEDQ+ YEGP+F DLDE+LQK+F KYLEIRGI P+TTNFL EYM NKD+KEYL WLKK
Sbjct: 188 DESEDQLLYEGPEFTDLDENLQKAFLKYLEIRGITPNTTNFLQEYMFNKDNKEYLGWLKK 247

Query: 250 VKSFIQ 255
           +KSFI+
Sbjct: 248 LKSFIE 253


>Medtr4g006560.1 | glycoprotein family protein | HC |
           chr4:678633-682789 | 20130731
          Length = 237

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 6/158 (3%)

Query: 99  FKIVDNPGNQTITLERTYQGEEIKVQVDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXX 158
           F +   PG + ITL+R +  E IKV+V M D                             
Sbjct: 83  FLVDGRPGERWITLKRQFANENIKVEVTMFDGAVPAPKKSGGVANADE---VQLHITLIV 139

Query: 159 XXXKKGGPFLEFSCMAYSDEIVIDSLSVK-NPELSEDQIAYEGPDFQDLDESLQKSFHKY 217
              K+ G  LE  C A+ D IVI  L V+ N  ++ +   Y GPDF++LD+ LQ S + +
Sbjct: 140 NISKEDGDVLEIMCSAWPDSIVIKRLLVRANKNMTAE--PYAGPDFEELDDELQDSLYNF 197

Query: 218 LEIRGIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQ 255
           LE+RGI      +LH+YM +KD  E + W++KVKS+I+
Sbjct: 198 LEVRGINDELAKYLHQYMKHKDKTEIIGWMEKVKSYIE 235


>Medtr1g013120.1 | glycoprotein family protein | HC |
           chr1:2858294-2861439 | 20130731
          Length = 233

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)

Query: 67  DETLLRVIESEITC-AEETDDHSAEEDLPKNFPFKIVDNPGNQTITLERTY-QGEEIKVQ 124
           +  +LR++ +EI   AE    H   ++      F + + PG Q +TL+  +   E+IK++
Sbjct: 49  ESNILRILRNEIEYQAEYAPPHQPVKEFKS---FIVEERPGEQVVTLKGKFGDNEDIKIE 105

Query: 125 VDMPDLVTXXXXXXXXXXXXXSERAXXXXXXXXXXXXKKGGPFLEFSCMAYSDEIVIDSL 184
             M D                                 +GG  LEF C A+ D + +  +
Sbjct: 106 ATMFD---GFEHVPAYGDDSSGVNVRLHLSLIVDISKGEGGNELEFVCSAWPDSLDVQKV 162

Query: 185 -SVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMINKDSKEY 243
             +K  ++S     Y GPDF++L   +++ F +YL+ RG+    + FLHEYM+NKD  E 
Sbjct: 163 FMLKRGKMSTR--PYLGPDFRNLKPKIREKFCEYLDARGVNNELSAFLHEYMMNKDRIEL 220

Query: 244 LVWLKKVKSFIQ 255
           L W+ ++KSF++
Sbjct: 221 LRWMDRLKSFVE 232


>Medtr7g091050.1 | glycoprotein family protein | HC |
           chr7:35918096-35913571 | 20130731
          Length = 213

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 168 LEFSCMAY-----SDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRG 222
           L+F C  Y     S E  I++        S     Y GP F +L+ +LQK+F +YL  +G
Sbjct: 107 LQFDCKVYQKNDESSEFDINNACYLGSPTSLSSSIYRGPLFSELNNNLQKAFKEYLIDKG 166

Query: 223 IKPSTTNFLHEYMINKDSKEYLVWLKKVKSFI 254
           I  S TNFL  Y+  ++ K+Y  WLKK ++F+
Sbjct: 167 IGGSLTNFLLHYLHTREQKQYANWLKKGEAFL 198


>Medtr7g091050.2 | glycoprotein family protein | HC |
           chr7:35918096-35913625 | 20130731
          Length = 178

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 168 LEFSCMAY-----SDEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRG 222
           L+F C  Y     S E  I++        S     Y GP F +L+ +LQK+F +YL  +G
Sbjct: 72  LQFDCKVYQKNDESSEFDINNACYLGSPTSLSSSIYRGPLFSELNNNLQKAFKEYLIDKG 131

Query: 223 IKPSTTNFLHEYMINKDSKEYLVWLKKVKSFI 254
           I  S TNFL  Y+  ++ K+Y  WLKK ++F+
Sbjct: 132 IGGSLTNFLLHYLHTREQKQYANWLKKGEAFL 163


>Medtr5g093000.1 | glycoprotein family protein | HC |
           chr5:40601916-40605994 | 20130731
          Length = 221

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 168 LEFSCMAYSDEIVIDSLSVKNPELSEDQ------IAYEGPDFQDLDESLQKSFHKYLEIR 221
           L F C  Y D + I S+S++ P+L +          Y GP F +LDE ++ +FH Y+E R
Sbjct: 121 LNFLCGLYEDALGIHSVSMR-PKLLDSSGYILTPTHYTGPVFAELDEKMRDAFHSYIEER 179

Query: 222 GIKPSTTNFLHEYMINKDSKEYLVWLKKVKSFIQA 256
           G+  S   FL  ++  K+ +  + W K +  FI  
Sbjct: 180 GVNDSLFKFLQAWLYVKEHRNLMRWFKTMGLFIDG 214