Miyakogusa Predicted Gene

Lj2g3v2647200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2647200.1 Non Characterized Hit- tr|G7IXZ2|G7IXZ2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,41.54,0.000009,seg,NULL; no description,Ribonuclease H1,
N-terminal; Cauli_VI,Ribonuclease H1, N-terminal; L9
N-dom,gene.g43561.t1.1
         (582 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g471840.1 | Ulp1 protease family, carboxy-terminal domain ...    58   2e-08

>Medtr6g471840.1 | Ulp1 protease family, carboxy-terminal domain
           protein | LC | chr6:25819311-25816178 | 20130731
          Length = 566

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 38/55 (69%)

Query: 525 SENSALWVLSWMNMENYSTPNVVGVMKERNIRMRVGLKVIMGEHNEIRDDVTSGA 579
           S+NSALWV+ WMNME+  T N++GV+ E   RM V ++++ G HNE  +D+   A
Sbjct: 498 SDNSALWVVEWMNMESSFTNNLMGVIDEDVSRMAVTMRLLTGNHNECNNDLIKNA 552