Miyakogusa Predicted Gene
- Lj2g3v2574450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2574450.1 tr|D7M7R3|D7M7R3_ARALL Histone H3 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_489722 PE=3 SV=1,90.3,0,Histone
H3,Histone H3; HISTONE H3,Histone H3; HISTONE_H3_2,Histone H3;
HISTONEH3,Histone H3; Histone,CUFF.39116.1
(134 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g061940.1 | core histone H2A/H2B/H3/H4 | HC | chr8:2586528... 246 4e-66
Medtr4g097175.1 | core histone H2A/H2B/H3/H4 | HC | chr4:4004401... 246 4e-66
Medtr1g023630.1 | core histone H2A/H2B/H3/H4 | HC | chr1:7595115... 246 4e-66
Medtr4g097170.1 | core histone H2A/H2B/H3/H4 | HC | chr4:4003290... 245 7e-66
Medtr8g099430.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4194351... 244 2e-65
Medtr7g013610.1 | core histone H2A/H2B/H3/H4 | HC | chr7:3930639... 238 1e-63
Medtr2g082310.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3458504... 238 1e-63
Medtr2g082340.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3457933... 238 1e-63
Medtr8g103245.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4348013... 237 2e-63
Medtr8g092820.1 | core histone H2A/H2B/H3/H4 | HC | chr8:3882234... 237 2e-63
Medtr8g092720.1 | core histone H2A/H2B/H3/H4 | HC | chr8:3879911... 237 2e-63
Medtr8g063500.1 | core histone H2A/H2B/H3/H4 | HC | chr8:2659175... 237 2e-63
Medtr7g059070.1 | core histone H2A/H2B/H3/H4 | HC | chr7:2131725... 237 2e-63
Medtr5g029820.1 | core histone H2A/H2B/H3/H4 | HC | chr5:1254753... 237 2e-63
Medtr5g029770.1 | core histone H2A/H2B/H3/H4 | HC | chr5:1253097... 237 2e-63
Medtr4g088150.1 | core histone H2A/H2B/H3/H4 | HC | chr4:3474835... 237 2e-63
Medtr4g065990.1 | core histone H2A/H2B/H3/H4 | HC | chr4:2486021... 237 2e-63
Medtr2g035230.1 | core histone H2A/H2B/H3/H4 | HC | chr2:1357600... 237 2e-63
Medtr2g082370.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3457185... 218 1e-57
Medtr2g082400.1 | core histone H2A/H2B/H3/H4 | HC | chr2:3456303... 199 4e-52
Medtr7g013600.1 | core histone H2A/H2B/H3/H4 | HC | chr7:3928921... 174 2e-44
Medtr7g023830.1 | core histone H2A/H2B/H3/H4 | LC | chr7:7804086... 152 9e-38
Medtr1g023630.2 | core histone H2A/H2B/H3/H4 | HC | chr1:7595031... 150 2e-37
Medtr7g023880.1 | core histone H2A/H2B/H3/H4 | LC | chr7:7813788... 129 1e-30
Medtr5g024630.1 | core histone H2A/H2B/H3/H4 | LC | chr5:9894399... 124 3e-29
Medtr5g024530.1 | auxin efflux carrier family protein | LC | chr... 117 4e-27
Medtr0197s0100.1 | histone H3.2 | LC | scaffold0197:30698-31571 ... 113 4e-26
Medtr8g027840.1 | core histone H2A/H2B/H3/H4 | HC | chr8:1017186... 107 3e-24
Medtr8g105150.1 | core histone H2A/H2B/H3/H4 | HC | chr8:4434350... 91 3e-19
Medtr5g089120.1 | core histone H2A/H2B/H3/H4 | LC | chr5:3873512... 71 3e-13
Medtr8g092740.1 | core histone H2A/H2B/H3/H4 | LC | chr8:3880516... 68 2e-12
Medtr4g128040.1 | core histone H2A/H2B/H3/H4 | LC | chr4:5329058... 63 1e-10
Medtr5g024600.1 | histone H3.2 | LC | chr5:9882344-9882508 | 201... 60 6e-10
>Medtr8g061940.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:25865281-25866119 | 20130731
Length = 136
Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr4g097175.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:40044012-40045887 | 20130731
Length = 136
Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr1g023630.1 | core histone H2A/H2B/H3/H4 | HC |
chr1:7595115-7593841 | 20130731
Length = 136
Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr4g097170.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:40032906-40036549 | 20130731
Length = 177
Score = 245 bits (626), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/134 (90%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 42 MARTKQTARKSTGGKAPRKPLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 101
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 102 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 161
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 162 MPKDIQLARRIRGE 175
>Medtr8g099430.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:41943518-41944336 | 20130731
Length = 136
Score = 244 bits (622), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/134 (89%), Positives = 126/134 (94%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+T+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTD 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr7g013610.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:3930639-3929751 | 20130731
Length = 235
Score = 238 bits (607), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 159
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 160 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 219
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 220 MPKDIQLARRIRGE 233
>Medtr2g082310.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34585044-34584634 | 20130731
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 124/134 (92%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTAR+S GKAPRK +A AARKSVPTTGG+KKPHRYRPGTVALREIRKYQK TE
Sbjct: 1 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKRIT+
Sbjct: 61 LLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITV 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MVKDIQLARRIRGE 134
>Medtr2g082340.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34579339-34578850 | 20130731
Length = 136
Score = 238 bits (606), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 124/134 (92%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTAR+S GKAPRK +A AARKSVPTTGG+KKPHRYRPGTVALREIRKYQK TE
Sbjct: 1 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKGTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQ+FKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKRIT+
Sbjct: 61 LLIRKLPFQRLVREIAQNFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITV 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MVKDIQLARRIRGE 134
>Medtr8g103245.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:43480135-43479451 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr8g092820.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:38822345-38821679 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr8g092720.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:38799119-38799848 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr8g063500.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:26591751-26592490 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr7g059070.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:21317255-21317977 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr5g029820.1 | core histone H2A/H2B/H3/H4 | HC |
chr5:12547531-12546727 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr5g029770.1 | core histone H2A/H2B/H3/H4 | HC |
chr5:12530976-12531938 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr4g088150.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:34748355-34749132 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr4g065990.1 | core histone H2A/H2B/H3/H4 | HC |
chr4:24860212-24860842 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr2g035230.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:13576004-13576690 | 20130731
Length = 136
Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 123/134 (91%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLIRK PFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKR+TI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 121 MSKDIQLARRLRAD 134
M KDIQLARR+R +
Sbjct: 121 MPKDIQLARRIRGE 134
>Medtr2g082370.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34571857-34571417 | 20130731
Length = 146
Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 120/144 (83%), Gaps = 10/144 (6%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGG----------VKKPHRYRPGTVALR 50
MARTKQTARKS GGKAPRK++A AR GG VKKPHR+R GTVALR
Sbjct: 1 MARTKQTARKSTGGKAPRKELATKVARAPRAKGGGKSMRKMREGHVKKPHRFRCGTVALR 60
Query: 51 EIRKYQKTTELLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 110
EIRKYQK+TELLIRK PFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 61 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 120
Query: 111 CAIHAKRITIMSKDIQLARRLRAD 134
CAIHAKR+TIM KDIQLARR+R +
Sbjct: 121 CAIHAKRVTIMPKDIQLARRIRGE 144
>Medtr2g082400.1 | core histone H2A/H2B/H3/H4 | HC |
chr2:34563033-34562620 | 20130731
Length = 137
Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 114/135 (84%), Gaps = 2/135 (1%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAP K +A AR P GG+K+P R+RPGTVALREIRKYQK+++
Sbjct: 1 MARTKQTARKSTGGKAPTKVLATKIARNYKPK-GGLKRPRRFRPGTVALREIRKYQKSSD 59
Query: 61 LLIRKQPFQRLVREIAQ-DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRIT 119
LLIRK PFQRLVREIA D K D RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR+T
Sbjct: 60 LLIRKLPFQRLVREIAHVDLKPDFRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 119
Query: 120 IMSKDIQLARRLRAD 134
IM KDIQLA R+R +
Sbjct: 120 IMPKDIQLACRIRGE 134
>Medtr7g013600.1 | core histone H2A/H2B/H3/H4 | HC |
chr7:3928921-3928580 | 20130731
Length = 113
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 95/111 (85%)
Query: 24 IAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFKTDL 83
+A RKS TGG+KKPHR+RPGTVALREIRKYQK TELLIRK PF+RLV EIAQDFKTDL
Sbjct: 1 MATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDL 60
Query: 84 RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLARRLRAD 134
RFQ AV ALQE AEA +VGLFED NLCAIHAKR+TI+ KDI+LA R+R +
Sbjct: 61 RFQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCE 111
>Medtr7g023830.1 | core histone H2A/H2B/H3/H4 | LC |
chr7:7804086-7803679 | 20130731
Length = 135
Score = 152 bits (384), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MAR+KQTA K A RK + A K T GVKK HRY GT+AL +IR+YQK+T+
Sbjct: 1 MARSKQTACKLSCAGA-RKRVDTNAELKFKLATIGVKKEHRYHLGTIALLKIRRYQKSTK 59
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITI 120
LLI+K PFQRLVREI Q+ K D RFQS AV ALQ +E YLVGLFED LCAIHAKR+TI
Sbjct: 60 LLIKKLPFQRLVREIVQNIKIDSRFQSRAVFALQVTSETYLVGLFEDAKLCAIHAKRVTI 119
Query: 121 MSKDIQLARRLRAD 134
+ +DI+LARR+R +
Sbjct: 120 IPEDIRLARRIRGE 133
>Medtr1g023630.2 | core histone H2A/H2B/H3/H4 | HC |
chr1:7595031-7593883 | 20130731
Length = 109
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS PTTGGVKKPHRYRPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 111
LLIRK PFQRLVREIAQDFK + H ++ + LV L LC
Sbjct: 61 LLIRKLPFQRLVREIAQDFKVNFVTYLHKRFCVKSCSS--LVYLITSICLC 109
>Medtr7g023880.1 | core histone H2A/H2B/H3/H4 | LC |
chr7:7813788-7813342 | 20130731
Length = 148
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 99/143 (69%), Gaps = 15/143 (10%)
Query: 1 MARTKQTARKSHGGKAPR---KDIAR---IAARKSVPTTGGVKKPHRYRPGTVALR--EI 52
MAR+KQ ARKS APR K IAR A R + G+K +P T+ ++ +
Sbjct: 1 MARSKQIARKSPC--APRMRIKQIARKSPCAPRMRINPNAGLK----IKPTTIGVKKQDT 54
Query: 53 RKYQKTTELLIRKQPFQRLVREIAQDFKTD-LRFQSHAVLALQEAAEAYLVGLFEDTNLC 111
R+YQK+T+LL++K PFQRLVREI Q + D LRFQS AVLALQ A+EA+LVGL ED LC
Sbjct: 55 RRYQKSTKLLMKKLPFQRLVREIVQKIEIDHLRFQSGAVLALQMASEAHLVGLLEDAKLC 114
Query: 112 AIHAKRITIMSKDIQLARRLRAD 134
AIHAKRIT++ +DIQLAR +R +
Sbjct: 115 AIHAKRITVIPEDIQLARTIRGE 137
>Medtr5g024630.1 | core histone H2A/H2B/H3/H4 | LC |
chr5:9894399-9894740 | 20130731
Length = 113
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MA TKQTAR + GGKAPRK +A AARKS G VKKPH + GTVALREIR YQ++T
Sbjct: 1 MAGTKQTARNT-GGKAPRKQLATKAARKSALAAGTVKKPHHFCHGTVALREIRNYQRSTS 59
Query: 61 LLIRKQPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAK 116
++ FKT LRFQS AV A+QE EA V LFEDTN+CAIHAK
Sbjct: 60 --NKEASVSETCEGNCSGFKTGLRFQSSAVSAVQEVVEACFVSLFEDTNICAIHAK 113
>Medtr5g024530.1 | auxin efflux carrier family protein | LC |
chr5:9867551-9866652 | 20130731
Length = 154
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 70/108 (64%), Gaps = 23/108 (21%)
Query: 21 IARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFK 80
+A AARKS P TGGVKKPHR+RPGTVALREIRK K
Sbjct: 70 LATKAARKSAPATGGVKKPHRFRPGTVALREIRKSTKRA--------------------- 108
Query: 81 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLA 128
L F + V ALQEAA+ YLVGLFEDTNLCAIHAKR+TIM +DIQLA
Sbjct: 109 --LSFLRNDVSALQEAAKDYLVGLFEDTNLCAIHAKRVTIMPEDIQLA 154
>Medtr0197s0100.1 | histone H3.2 | LC | scaffold0197:30698-31571 |
20130731
Length = 140
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/65 (86%), Positives = 59/65 (90%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRKYQKTTE 60
MARTKQTARKS GGKAPRK +A AARKS P TGGVKKPHR+RPGTVALREIRKYQK+TE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 61 LLIRK 65
LLIRK
Sbjct: 61 LLIRK 65
>Medtr8g027840.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:10171868-10177072 | 20130731
Length = 130
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 37 KKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFKTDL-RFQSHAVLALQE 95
KK R RPGTVALREIRK+QK LLI PF R V++I ++ R+ + A+LALQE
Sbjct: 28 KKKRRNRPGTVALREIRKFQKAVNLLIPCAPFVRCVKQITNQLSMEVSRWTAEALLALQE 87
Query: 96 AAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLARRL 131
AAE +LV +FE LCA+HAKR+T+M KD++L RRL
Sbjct: 88 AAEEHLVRMFEGGMLCALHAKRVTLMKKDLELTRRL 123
>Medtr8g105150.1 | core histone H2A/H2B/H3/H4 | HC |
chr8:44343504-44344109 | 20130731
Length = 72
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 54/92 (58%), Gaps = 34/92 (36%)
Query: 37 KKPHRYRPGTVALREIRKYQKTTELLIRKQPFQRLVREIAQDFKTDLRFQSHAVLA-LQE 95
KKPH YRPGTVALRE SHAVLA LQE
Sbjct: 11 KKPHHYRPGTVALRE---------------------------------RSSHAVLAVLQE 37
Query: 96 AAEAYLVGLFEDTNLCAIHAKRITIMSKDIQL 127
AAEAYLVGLFEDTNLCAIHAKR+TIM KDIQL
Sbjct: 38 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 69
>Medtr5g089120.1 | core histone H2A/H2B/H3/H4 | LC |
chr5:38735121-38736214 | 20130731
Length = 92
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 82 DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRITIMSKDIQLA 128
+LRF S+AV ALQ+ E YLVGLFEDTNLC IHAKR+TI+SK ++A
Sbjct: 6 NLRFHSNAVSALQKVIEVYLVGLFEDTNLCTIHAKRVTIISKGKKVA 52
>Medtr8g092740.1 | core histone H2A/H2B/H3/H4 | LC |
chr8:38805160-38807153 | 20130731
Length = 155
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 99 AYLVGLFEDTNLCAIHAKRITIMSKDIQLARRLRAD 134
AYLVGLFEDTN CAIHAKR+TIM KDIQLARR+R +
Sbjct: 118 AYLVGLFEDTNPCAIHAKRVTIMPKDIQLARRIRGE 153
>Medtr4g128040.1 | core histone H2A/H2B/H3/H4 | LC |
chr4:53290580-53291354 | 20130731
Length = 83
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 29/37 (78%)
Query: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 115
KTDLRF S+ V ALQ+ EAYLVGLFEDTNLC IH
Sbjct: 20 LKTDLRFHSNVVSALQKVVEAYLVGLFEDTNLCTIHV 56
>Medtr5g024600.1 | histone H3.2 | LC | chr5:9882344-9882508 |
20130731
Length = 54
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 1 MARTKQTARKSHGGKAPRKDIARIAARKSVPTTGGVKKPHRYRPGTVALREIRK 54
MARTK+T+RKS GGK P K IA A K PTTGGVK HR+ +ALREIR+
Sbjct: 1 MARTKETSRKSIGGKEPCKQIAIKGAWKLDPTTGGVKMQHRFSLKIIALREIRR 54