Miyakogusa Predicted Gene

Lj2g3v2574420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2574420.1 Non Characterized Hit- tr|F6HIZ0|F6HIZ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,82.61,0.00000000000001,seg,NULL; coiled-coil,NULL,CUFF.39115.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g079680.2 | hypothetical protein | HC | chr5:34077594-3407...   199   3e-51
Medtr5g079680.1 | hypothetical protein | HC | chr5:34077575-3407...   199   3e-51
Medtr8g085190.1 | hypothetical protein | HC | chr8:35245686-3524...   156   2e-38

>Medtr5g079680.2 | hypothetical protein | HC |
           chr5:34077594-34074842 | 20130731
          Length = 328

 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 106/129 (82%), Gaps = 4/129 (3%)

Query: 1   MKRKKWSETEEQTLLSKYSDLLRSGTLTKLKTREKKFKPIADHVNAVHHLYDPAAFPFRW 60
           MKRKKWSE EEQTLL+KYS+L RSGTL KLKTREKKFKPIADHVNAVHHL+DP  FPF+W
Sbjct: 1   MKRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKW 60

Query: 61  SWRDVSIKVQNMRHQYLGVKQKIRLSPHHFNWKDGPNHWENFLNYKEVFGDVQLESKSGG 120
           SWRDVSIKVQNMRHQY+GVK KI+ + H FNW DG  HWENFLNYK VFGDV++  K   
Sbjct: 61  SWRDVSIKVQNMRHQYIGVKHKIQSNDHGFNWNDGVIHWENFLNYKRVFGDVKIHPKPKL 120

Query: 121 NRSRELGFE 129
           N     GFE
Sbjct: 121 ND----GFE 125



 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 57/76 (75%), Gaps = 1/76 (1%)

Query: 256 AMQVEHEKQMMQLHAEACQNQMQVLGVIARILCQFFGS-RSDXXXXXXXXXPPQDLHHAD 314
           AMQ+EHEKQMMQ+HAEAC NQMQVLGV+ARILCQFFGS             P Q LHH  
Sbjct: 253 AMQIEHEKQMMQMHAEACHNQMQVLGVMARILCQFFGSGNDGLGGAGLGTLPTQVLHHGG 312

Query: 315 GLENVKPDANSPSEFI 330
           GL NVKPDA+SPSEF+
Sbjct: 313 GLGNVKPDASSPSEFM 328


>Medtr5g079680.1 | hypothetical protein | HC |
           chr5:34077575-34073115 | 20130731
          Length = 328

 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 106/129 (82%), Gaps = 4/129 (3%)

Query: 1   MKRKKWSETEEQTLLSKYSDLLRSGTLTKLKTREKKFKPIADHVNAVHHLYDPAAFPFRW 60
           MKRKKWSE EEQTLL+KYS+L RSGTL KLKTREKKFKPIADHVNAVHHL+DP  FPF+W
Sbjct: 1   MKRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKW 60

Query: 61  SWRDVSIKVQNMRHQYLGVKQKIRLSPHHFNWKDGPNHWENFLNYKEVFGDVQLESKSGG 120
           SWRDVSIKVQNMRHQY+GVK KI+ + H FNW DG  HWENFLNYK VFGDV++  K   
Sbjct: 61  SWRDVSIKVQNMRHQYIGVKHKIQSNDHGFNWNDGVIHWENFLNYKRVFGDVKIHPKPKL 120

Query: 121 NRSRELGFE 129
           N     GFE
Sbjct: 121 ND----GFE 125



 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 57/76 (75%), Gaps = 1/76 (1%)

Query: 256 AMQVEHEKQMMQLHAEACQNQMQVLGVIARILCQFFGS-RSDXXXXXXXXXPPQDLHHAD 314
           AMQ+EHEKQMMQ+HAEAC NQMQVLGV+ARILCQFFGS             P Q LHH  
Sbjct: 253 AMQIEHEKQMMQMHAEACHNQMQVLGVMARILCQFFGSGNDGLGGAGLGTLPTQVLHHGG 312

Query: 315 GLENVKPDANSPSEFI 330
           GL NVKPDA+SPSEF+
Sbjct: 313 GLGNVKPDASSPSEFM 328


>Medtr8g085190.1 | hypothetical protein | HC |
           chr8:35245686-35247707 | 20130731
          Length = 442

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 75/139 (53%), Positives = 96/139 (69%), Gaps = 12/139 (8%)

Query: 2   KRKKWSETEEQTLLSKYSDLLRSGTLTKLKTREKKFKPIADHVNAVHHLYDPAAFPFRWS 61
           +RKKW+E EE+TL+ KY +++  G+L K++TREKKFKPIA +VN+VHH+ DP  +P++WS
Sbjct: 5   RRKKWTEAEEKTLIDKYGEMVTDGSLAKMRTREKKFKPIACYVNSVHHVRDPVVYPWQWS 64

Query: 62  WRDVSIKVQNMRHQYLGVKQKIRL---------SPHHFNWKDGPNHWENFLNYKEVFGDV 112
           W+DVS KVQNMRHQYL VKQKI+              F+W +G  HW NFL YKEVFGDV
Sbjct: 65  WKDVSTKVQNMRHQYLLVKQKIKKGEFSGGECDGSSEFDWVEGLTHWSNFLRYKEVFGDV 124

Query: 113 QLESKSG---GNRSRELGF 128
            L    G   G  +  LGF
Sbjct: 125 ALVVGGGAEHGGNNELLGF 143