Miyakogusa Predicted Gene

Lj2g3v2560020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2560020.1 Non Characterized Hit- tr|F4INW9|F4INW9_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,33.73,2e-18,coiled-coil,NULL; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.39085.1
         (574 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g078300.1 | zein-binding protein | HC | chr5:33462340-3346...   477   e-134
Medtr4g107310.1 | zein-binding protein | HC | chr4:44349938-4435...    81   3e-15
Medtr7g115350.4 | zein-binding protein | HC | chr7:47657804-4766...    76   8e-14
Medtr7g115350.7 | zein-binding protein | HC | chr7:47657696-4766...    76   8e-14
Medtr7g115350.8 | zein-binding protein | HC | chr7:47657696-4766...    76   8e-14
Medtr7g115350.1 | zein-binding protein | HC | chr7:47657696-4766...    76   8e-14
Medtr7g115350.6 | zein-binding protein | HC | chr7:47657696-4766...    76   8e-14
Medtr7g115350.2 | zein-binding protein | HC | chr7:47657828-4766...    76   8e-14
Medtr7g115350.5 | zein-binding protein | HC | chr7:47657804-4766...    76   8e-14
Medtr7g115350.3 | zein-binding protein | HC | chr7:47657804-4766...    76   8e-14
Medtr0168s0060.1 | zein-binding protein | HC | scaffold0168:1885...    74   5e-13
Medtr1g070350.1 | zein-binding protein | HC | chr1:31104852-3110...    72   2e-12

>Medtr5g078300.1 | zein-binding protein | HC |
           chr5:33462340-33466036 | 20130731
          Length = 986

 Score =  477 bits (1227), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/577 (48%), Positives = 351/577 (60%), Gaps = 53/577 (9%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           MA NKFAT+LHRNTNKI+  LVYA LEW                T+FAK  GL+PPC++C
Sbjct: 1   MAANKFATILHRNTNKIVVILVYAFLEWILIIFLLLNSLFSYLITKFAKGFGLKPPCLFC 60

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHD 120
           SR+DHVLHQ ++S  F  +L+CETHAAEIS LGYCSNHQ LAE H+MCE+C AS+PN H+
Sbjct: 61  SRLDHVLHQ-ENSKFFQSDLVCETHAAEISNLGYCSNHQRLAETHSMCENCLASRPNHHE 119

Query: 121 -ENSFGVRHRIALISWVSHESG----ENVKRCSCCNESLRSKIYPPYLLLNPSWGDGNCT 175
            ENSFG+RHRI  I W+ HE      E++ RCSCCNESL ++IYPPY LL PSW DGN  
Sbjct: 120 TENSFGMRHRIGFIPWLGHEKHDENEESLNRCSCCNESLNNQIYPPY-LLKPSWYDGNYL 178

Query: 176 SKGSLIVESIDGEKEGDKDLDFERNNGDGDHDDEGVVADEHQILSDIESFILRETAEDRS 235
           SKGSLIVESI+ +KEG+K ++FE NNG+ DHD +  + +EHQI SDIESFILRE AEDRS
Sbjct: 179 SKGSLIVESIEDDKEGEKYIEFEINNGE-DHDHDEQILNEHQIFSDIESFILREVAEDRS 237

Query: 236 SSNSNLQSXXXXXXXXXXX------------------XXXXHWEDRSLEVMIKHFEDHVP 277
           SS SNL S                                 H EDRSLE++  HFE++  
Sbjct: 238 SSVSNLNSDEKDAEKDEKEDYPSAVDDFIHLFSDAPIMQVSHCEDRSLEIINMHFENYKA 297

Query: 278 CDTNRLIPIKLIDSISSLKFGSCKLDEDLGEKEQQMQSFAIEAPIEAQSTILEAALLTVD 337
            D +RL+P+KLIDSI+ L F SCK +EDL E+++++Q+F  E+P+E QS+ILE  +L   
Sbjct: 298 IDDDRLVPVKLIDSITCLNFESCKWNEDLEEEKEKIQTFVSESPVEPQSSILEEEVLLKM 357

Query: 338 KKNEEKSSMREL-QSLLNS-TSEVEESKWNSVVEVGPEMATYEEAKISLNDGNSVE---- 391
            +N EK++MREL +SL NS T EVE    NSV+            +IS+N  NS E    
Sbjct: 358 DENAEKTNMRELEESLENSITLEVEGLNQNSVL------------QISVNGDNSTEEAIE 405

Query: 392 ----AQVDQSRSQEPVCLYACTX-XXXXXXXXXXAEVPNAFGKFIAQNNLGTSQSLSKDD 446
               AQVD  +SQE +C Y CT            AE  NAF KFI+QN L  S SLS +D
Sbjct: 406 EPDNAQVDLFQSQESICSYECTQEDESESSDDDEAEAQNAFEKFISQNKLSMSHSLSDND 465

Query: 447 KSLEAAMEEQENTSRANXXXXXXXXXXXQCIPXXXXXXXXXXXXXXVPNAFEKFIAQNNL 506
           ++LEA MEEQEN    N           QC+               V NAF++FIAQNNL
Sbjct: 466 RNLEADMEEQENAPPDNLPPSEEPTYSSQCMLEDQSSSSDSEDDTEVHNAFDEFIAQNNL 525

Query: 507 SMSQTLSNN----DKCLEADTEEPENTPREPSCSNQC 539
            M +T  N+    +K + A+  E E   +   CS  C
Sbjct: 526 HMDKTGVNDNEMAEKTMSAEKIEEETIHQSSKCSESC 562



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 7/82 (8%)

Query: 495 NAFEKFIAQNNLSMSQTLSNNDKCLEADTEEPENTP-------REPSCSNQCIXXXXXXX 547
           NAFEKFI+QN LSMS +LS+ND+ LEAD EE EN P        EP+ S+QC+       
Sbjct: 444 NAFEKFISQNKLSMSHSLSDNDRNLEADMEEQENAPPDNLPPSEEPTYSSQCMLEDQSSS 503

Query: 548 XXXXXXXXIPNAFDEFLAQNNL 569
                   + NAFDEF+AQNNL
Sbjct: 504 SDSEDDTEVHNAFDEFIAQNNL 525


>Medtr4g107310.1 | zein-binding protein | HC |
           chr4:44349938-44351689 | 20130731
          Length = 505

 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 21/177 (11%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           MAT  F   + RN  K    L+  +LEW                T FA++  L+ PC  C
Sbjct: 1   MATRSFIRFVERNIGKFPHFLLCMMLEWVLIISLFIDGLLAFFITEFARFFDLEIPCWLC 60

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHD 120
           ++++H L   K+ N +    +CE H  ++S L +C NH+ L++   MCE C  S   Q +
Sbjct: 61  AKMNHFLTH-KTPNFYYNSSMCEAHKKDVSSLAFCYNHKKLSDTRKMCEGCLLSFATQKE 119

Query: 121 ENSFGVRHRIALIS--------------------WVSHESGENVKRCSCCNESLRSK 157
            N    +  + +++                     V        ++CSCC   L+ K
Sbjct: 120 SNCDTYKSLVGILNKNLDCFVEDSGNIQLSLKDEGVIQVEKNGTQKCSCCGAPLKLK 176


>Medtr7g115350.4 | zein-binding protein | HC |
           chr7:47657804-47662758 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.7 | zein-binding protein | HC |
           chr7:47657696-47662650 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.8 | zein-binding protein | HC |
           chr7:47657696-47662646 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.1 | zein-binding protein | HC |
           chr7:47657696-47662270 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.6 | zein-binding protein | HC |
           chr7:47657696-47662713 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.2 | zein-binding protein | HC |
           chr7:47657828-47662758 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.5 | zein-binding protein | HC |
           chr7:47657804-47662758 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr7g115350.3 | zein-binding protein | HC |
           chr7:47657804-47662758 | 20130731
          Length = 873

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 16  KIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNL 75
           +I  +L  A+LEW                T+FA +  L+ PC++CSR+DHVL  GK    
Sbjct: 21  RITTSLASALLEWLLIIFLFISAIFSYVITKFANYCKLKTPCLFCSRLDHVL--GKQKRG 78

Query: 76  FSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHDENSFGVRHRIALISW 135
           +  +L+C  H +EIS+L +C  H  L     +CE C  S       N+   R  +   S 
Sbjct: 79  YYLDLICSLHKSEISELVFCRAHDKLVNIQGVCETCVLSSATVDKSNAETSRLLVGK-SG 137

Query: 136 VSHESGE------------NVKRCSCCNESLR 155
              ESG                 CSCC+E  +
Sbjct: 138 EEEESGSVFDHDPLLGQHTVAGHCSCCSEKFQ 169


>Medtr0168s0060.1 | zein-binding protein | HC |
           scaffold0168:18855-21061 | 20130731
          Length = 520

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 29/188 (15%)

Query: 1   MATNKFATMLHRNTNKIIATLVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWC 60
           MA+  F+  +     K    ++Y  LEW                  +A++  L+ PC  C
Sbjct: 1   MASRSFSHFVEEALGKFPHLVIYIFLEWVLIFILFLDGFLAFIANEYARFFELKIPCWLC 60

Query: 61  SRVDHVLHQGKSSNLFSRELLCETHAAEISKLGYCSNHQTLAEAHNMCEDCFASQPNQHD 120
           +R DH +   ++ + +  E +CE H  ++S L +C NH+ L++   MCE C  S   + +
Sbjct: 61  TRFDHAMVH-RNPDFYYNESVCEAHKKDMSSLAFCHNHKKLSDIRKMCEGCLLSFATEKE 119

Query: 121 ------ENSFGVRHRIALISWVSHESGENV-------------------KRCSCCNESLR 155
                 ++  G+ H+  L  +V  E G+ +                   ++CSCC + L+
Sbjct: 120 SDCDTYKSLVGILHK-DLECFV--EDGQPIQLSLKDDDGLMMQLDRNSTQKCSCCGKPLK 176

Query: 156 SKIYPPYL 163
            K   PY+
Sbjct: 177 VKSSSPYI 184


>Medtr1g070350.1 | zein-binding protein | HC |
           chr1:31104852-31101335 | 20130731
          Length = 866

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 2/94 (2%)

Query: 21  LVYAVLEWXXXXXXXXXXXXXXXXTRFAKWVGLQPPCIWCSRVDHVLHQGKSSNLFSREL 80
           L +   EW                 +FA +  LQ PC+ CSR+DH+L   K    F   L
Sbjct: 24  LTFVACEWFLIFLLLVDSLLSYLVKKFASYCKLQLPCLLCSRLDHILDGEKPE--FYHSL 81

Query: 81  LCETHAAEISKLGYCSNHQTLAEAHNMCEDCFAS 114
           LC  H +EIS +  C  H  LA+ H MC+DC  S
Sbjct: 82  LCSDHKSEISSMMLCHTHGKLADGHRMCDDCLLS 115