Miyakogusa Predicted Gene

Lj2g3v2543810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2543810.1 Non Characterized Hit- tr|G7KG24|G7KG24_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,90.97,0,ThiF,UBA/THIF-type NAD/FAD binding fold;
MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN,NULL;
UBIQUITIN-ACT,CUFF.39068.1
         (288 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077840.1 | rossmann-fold NAD(P)-binding domain protein | ...   555   e-158

>Medtr5g077840.1 | rossmann-fold NAD(P)-binding domain protein | HC
           | chr5:33233829-33243349 | 20130731
          Length = 459

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/288 (90%), Positives = 273/288 (94%)

Query: 1   MLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRI 60
           MLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRI
Sbjct: 172 MLYDSSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRI 231

Query: 61  ADLRESTNDPLSRSVRHRLRKDHGIEGGIPVVFSLEKPKIKLLPFKGPSGEEENPSDYQV 120
           ADLRESTNDPLSRSVRHRLRKDHGI+GGIPVVFSLEKPK+KLLPFKG SGEEENPSDYQ+
Sbjct: 232 ADLRESTNDPLSRSVRHRLRKDHGIDGGIPVVFSLEKPKVKLLPFKGSSGEEENPSDYQI 291

Query: 121 VPGFRVRIIPVLGTIPAIFGQVMASYVLTNLAGLHVQNEPIVNFDMDHYHTLHQRLIEHE 180
           VPGFRVRIIPVLGTIPAIFGQVMASYVLT+LAGLHVQ EP+VNFDMDHYH LHQRLIEHE
Sbjct: 292 VPGFRVRIIPVLGTIPAIFGQVMASYVLTDLAGLHVQTEPVVNFDMDHYHILHQRLIEHE 351

Query: 181 ETLYSTSMQVQVDVEEVMYIVKELWHGRSAREQLVKDVGRGMWRSINELMLIRWDCTKPA 240
           ETLY TSM VQVD EEV YI KELWHGRSAREQ+ KDVGR MWRS+NELML+RWD TKPA
Sbjct: 352 ETLYGTSMHVQVDAEEVKYIAKELWHGRSAREQVAKDVGRAMWRSVNELMLVRWDSTKPA 411

Query: 241 SISNLILLKFKEVDEHESQTLDDIKEKEPEFYNRVTTVLKRAELDFGL 288
           SISNLILLKF EVDEHES+TLDD+KEKEPEFY+RV  VLKRAE DFGL
Sbjct: 412 SISNLILLKFNEVDEHESRTLDDVKEKEPEFYSRVIAVLKRAENDFGL 459