Miyakogusa Predicted Gene

Lj2g3v2533290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2533290.1 tr|B9I1A8|B9I1A8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_771495 PE=3
SV=1,46.3,4e-19,seg,NULL; Lectin_legB,Legume lectin domain; no
description,Concanavalin A-like lectin/glucanase, sub,CUFF.39046.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077100.1 | L-type lectin-domain receptor kinase | HC | ch...   139   7e-34
Medtr5g068770.1 | lectin-like receptor kinase, putative | HC | c...    48   3e-06

>Medtr5g077100.1 | L-type lectin-domain receptor kinase | HC |
           chr5:32902568-32899709 | 20130731
          Length = 700

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 75/103 (72%)

Query: 22  AVEFDFXXXXXXXXXXXXDAHLTNGTVSLTRDLAVPFSGAGQALYSRPVRFRQPGTNIPA 81
           + EFDF            DAHL NGTV+LTRDL VPFSGAGQALYSRP+RFRQPGT  PA
Sbjct: 28  STEFDFGTLTLTSLKLLGDAHLNNGTVTLTRDLTVPFSGAGQALYSRPIRFRQPGTTTPA 87

Query: 82  XXXXXXXXXXXNLNPSSIGGGLAFVITPDDETVGDAGGYLGLA 124
                      NLNPSSIGGGLAF+I+PDDE++GDAGGYLGLA
Sbjct: 88  SFTTFFSFSVTNLNPSSIGGGLAFIISPDDESLGDAGGYLGLA 130


>Medtr5g068770.1 | lectin-like receptor kinase, putative | HC |
           chr5:29132699-29130239 | 20130731
          Length = 672

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 61  AGQALYSRPVRFRQPGTNIPAXXXXXXXXXXXNLNPSSI------GGGLAFVITPDDETV 114
           AG+ LYS P+R   P T  PA           NL  +S       G GL F+I PD+ TV
Sbjct: 80  AGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNLTTASDISDYGGGSGLTFIIVPDEFTV 139

Query: 115 GDAGGYLGL 123
           G  G +LG+
Sbjct: 140 GRPGPWLGM 148