Miyakogusa Predicted Gene

Lj2g3v2522130.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2522130.2 Non Characterized Hit- tr|I3S8P0|I3S8P0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; ANDROGEN INDUCED INHIBITOR OF PROLIFERATION
(AS3) / PDS5-RELATED,CUFF.39039.2
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC ...   186   7e-48
Medtr1g014300.1 | nucleic acid-binding protein, putative | HC | ...   174   3e-44
Medtr3g106100.1 | nucleic acid-binding protein, putative | HC | ...   169   1e-42
Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | ...   108   2e-24
Medtr4g030130.1 | sister chromatid cohesion PDS5-like protein, p...    97   7e-21
Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | ...    95   4e-20
Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | ...    95   4e-20
Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | ...    94   6e-20
Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | ...    94   7e-20
Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | ...    94   7e-20
Medtr1g037280.2 | sister chromatid cohesion PDS5-like protein | ...    83   1e-16
Medtr1g037280.1 | sister chromatid cohesion PDS5-like protein | ...    83   1e-16
Medtr1g037280.3 | sister chromatid cohesion PDS5-like protein | ...    83   1e-16

>Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC |
           chr1:3029508-3039200 | 20130731
          Length = 930

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 118/162 (72%), Gaps = 2/162 (1%)

Query: 8   DKELRMEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKAL 67
           DKEL  E+ELL AG+KL DPPSSVD LL++L ++E C+S VEQS  E ML ALSP LKAL
Sbjct: 5   DKEL--EEELLGAGNKLLDPPSSVDNLLDILIQIESCLSRVEQSPPESMLNALSPSLKAL 62

Query: 68  TADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRS 127
            ADKL++HSD  V+V++ASC SE+ RITAPD PY+D QMKEVF LIVS+ ENLHD SSR 
Sbjct: 63  IADKLIKHSDADVKVALASCFSEITRITAPDAPYDDGQMKEVFRLIVSSFENLHDKSSRW 122

Query: 128 YAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           Y+KR  IL  +AKVRS              EMFQHF K IRE
Sbjct: 123 YSKRTLILETVAKVRSCVVMLDLECDALILEMFQHFLKTIRE 164


>Medtr1g014300.1 | nucleic acid-binding protein, putative | HC |
           chr1:3015402-3017934 | 20130731
          Length = 246

 Score =  174 bits (442), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 93/159 (58%), Positives = 114/159 (71%)

Query: 12  RMEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADK 71
           ++EKELLEAG+KL +PPSSVD LL LL +V   +S VEQS ++ +  ALSP LKAL +DK
Sbjct: 19  KLEKELLEAGNKLLNPPSSVDNLLRLLGQVGKSLSKVEQSPSKSIQKALSPSLKALISDK 78

Query: 72  LMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKR 131
           L++HSD GV+V++ASC+SEL RITAPD PY D QMKEV  LIVS+ ENLHDMSSR Y  R
Sbjct: 79  LIKHSDVGVKVALASCLSELTRITAPDGPYNDHQMKEVLRLIVSSFENLHDMSSRWYETR 138

Query: 132 INILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIREF 170
           I+IL  +AKVR               EMF+ F K IRE+
Sbjct: 139 ISILETVAKVRLCVVMLDLECDALILEMFRLFLKTIREY 177


>Medtr3g106100.1 | nucleic acid-binding protein, putative | HC |
           chr3:48971316-48964581 | 20130731
          Length = 802

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/157 (53%), Positives = 112/157 (71%)

Query: 13  MEKELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKL 72
           +E++L++AG+KLADPPSSVDELL+LL+R+E  ++ VEQ+    M  AL+P +K L  +KL
Sbjct: 8   LEEQLIQAGNKLADPPSSVDELLSLLNRLESYLAKVEQAPRTSMRTALAPCMKELVGNKL 67

Query: 73  MRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRI 132
           +RH D  V+ ++A+CISE+ RI+APD PY+DDQMKE+F LIVS+ ENLHD  SRSY  R 
Sbjct: 68  LRHPDPDVKAALAACISEITRISAPDTPYDDDQMKEIFQLIVSSFENLHDKLSRSYENRR 127

Query: 133 NILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
            +L  +AKVRS              EMFQHF K IR+
Sbjct: 128 IVLETVAKVRSCVVMLDLDCDALILEMFQHFLKTIRD 164


>Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr2:9853017-9871224 | 20130731
          Length = 1683

 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 90/154 (58%)

Query: 16  ELLEAGSKLADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLMRH 75
           +L + GSKL   PSS++ L+ +L +   C++ ++QS +   L ++ P L A+   +L++H
Sbjct: 8   QLKDLGSKLQIIPSSIEVLIQILKQAATCLTDMDQSPSASALESMKPFLNAIVKSELLKH 67

Query: 76  SDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINIL 135
            D  V++ +A+C+ E+ RITAP+ PY DD +K++F LIVS    L D+SS S+   + +L
Sbjct: 68  QDRDVKLLVATCVCEITRITAPEAPYSDDVLKDIFQLIVSTFSGLSDISSPSFGMEVAML 127

Query: 136 YLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
             LAK RS              E+F  FF  +R+
Sbjct: 128 DTLAKYRSCVVMLDLECDDLVNEIFNTFFAVVRD 161


>Medtr4g030130.1 | sister chromatid cohesion PDS5-like protein,
           putative | HC | chr4:10453009-10454253 | 20130731
          Length = 152

 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 81/119 (68%), Gaps = 1/119 (0%)

Query: 15  KELLEAGSKLA-DPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLM 73
           ++L + G KL+ +  SSVD+LL +LD++E  +S+++Q   +P+  +L   +K L +D+L+
Sbjct: 18  QKLRDVGRKLSKNLASSVDKLLEILDKLELVLSNLDQDPAKPIQESLVLPMKTLISDELL 77

Query: 74  RHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRI 132
           RH+D+ V++S+ +C++E+ RITAP+ PY D+ MKE   L+  A E L  +S R Y K I
Sbjct: 78  RHTDDDVKISVTACLTEIARITAPNAPYNDEHMKEYLKLMADAFEKLSGVSGRGYEKAI 136


>Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:842728-848441 | 20130731
          Length = 761

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 77/122 (63%)

Query: 47  SVEQSHTEPMLIALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQM 106
           +++Q+  EP+  +L   +K L +D+L++H+DE V++S+ +C++E+ RITAP+ PY+D+ M
Sbjct: 7   NLDQNPPEPIQESLVLPMKTLISDELLKHTDEDVKISVTACLTEIARITAPNDPYDDENM 66

Query: 107 KEVFHLIVSAVENLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKE 166
           KE F L V+A ENL  +S R Y K + IL  ++K++               EMFQ F + 
Sbjct: 67  KEFFKLTVAAFENLSHVSGRRYEKALTILEKISKIKIFLIMLDLECDDLVIEMFQQFLRI 126

Query: 167 IR 168
           IR
Sbjct: 127 IR 128


>Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:842674-848397 | 20130731
          Length = 799

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 77/122 (63%)

Query: 47  SVEQSHTEPMLIALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQM 106
           +++Q+  EP+  +L   +K L +D+L++H+DE V++S+ +C++E+ RITAP+ PY+D+ M
Sbjct: 45  NLDQNPPEPIQESLVLPMKTLISDELLKHTDEDVKISVTACLTEIARITAPNDPYDDENM 104

Query: 107 KEVFHLIVSAVENLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKE 166
           KE F L V+A ENL  +S R Y K + IL  ++K++               EMFQ F + 
Sbjct: 105 KEFFKLTVAAFENLSHVSGRRYEKALTILEKISKIKIFLIMLDLECDDLVIEMFQQFLRI 164

Query: 167 IR 168
           IR
Sbjct: 165 IR 166


>Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119398-56132067 | 20130731
          Length = 1657

 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)

Query: 17  LLEAGSKL-ADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLMRH 75
           L E GSK     P+S D L+ LL +    ++ ++QS       +++P   A+   +L++H
Sbjct: 17  LKELGSKFDIIVPTSKDSLIKLLKQATTYLAELDQSPLTTTRDSMNPFFNAIVKPELLKH 76

Query: 76  SDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINIL 135
            D+ V++ +A+CI E+ RITAP+ PY D+ +K+ F LIVS    L D S  S+ +R+ IL
Sbjct: 77  QDKDVKLLVATCICEITRITAPEAPYNDEILKDTFRLIVSTFSGLSDTSGPSFGRRVVIL 136

Query: 136 YLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
             LAK RS              EMF  F    R+
Sbjct: 137 ETLAKYRSCVVMLDLECDDLVNEMFSTFVAVARD 170


>Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119240-56132121 | 20130731
          Length = 1660

 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)

Query: 17  LLEAGSKL-ADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLMRH 75
           L E GSK     P+S D L+ LL +    ++ ++QS       +++P   A+   +L++H
Sbjct: 17  LKELGSKFDIIVPTSKDSLIKLLKQATTYLAELDQSPLTTTRDSMNPFFNAIVKPELLKH 76

Query: 76  SDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINIL 135
            D+ V++ +A+CI E+ RITAP+ PY D+ +K+ F LIVS    L D S  S+ +R+ IL
Sbjct: 77  QDKDVKLLVATCICEITRITAPEAPYNDEILKDTFRLIVSTFSGLSDTSGPSFGRRVVIL 136

Query: 136 YLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
             LAK RS              EMF  F    R+
Sbjct: 137 ETLAKYRSCVVMLDLECDDLVNEMFSTFVAVARD 170


>Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:56119254-56132113 | 20130731
          Length = 1667

 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)

Query: 17  LLEAGSKL-ADPPSSVDELLNLLDRVECCVSSVEQSHTEPMLIALSPLLKALTADKLMRH 75
           L E GSK     P+S D L+ LL +    ++ ++QS       +++P   A+   +L++H
Sbjct: 17  LKELGSKFDIIVPTSKDSLIKLLKQATTYLAELDQSPLTTTRDSMNPFFNAIVKPELLKH 76

Query: 76  SDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVENLHDMSSRSYAKRINIL 135
            D+ V++ +A+CI E+ RITAP+ PY D+ +K+ F LIVS    L D S  S+ +R+ IL
Sbjct: 77  QDKDVKLLVATCICEITRITAPEAPYNDEILKDTFRLIVSTFSGLSDTSGPSFGRRVVIL 136

Query: 136 YLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
             LAK RS              EMF  F    R+
Sbjct: 137 ETLAKYRSCVVMLDLECDDLVNEMFSTFVAVARD 170


>Medtr1g037280.2 | sister chromatid cohesion PDS5-like protein | HC
           | chr1:13708601-13728159 | 20130731
          Length = 1414

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 65/111 (58%)

Query: 59  ALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVE 118
           AL PL+ A+    L++H D+ V++ +A C++EL RI AP+PP+ED  +++VF LI+    
Sbjct: 62  ALKPLIDAVVCGGLLQHGDKDVKLLVALCVTELFRIKAPEPPFEDKHLRDVFKLIIGLFA 121

Query: 119 NLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           +L D  +  ++KR+ +L  +A+++               EMF  FF  +R+
Sbjct: 122 DLADTKNSLFSKRVKVLDTVAQLKCCLLMLEIDCIDLVLEMFNVFFSAVRD 172


>Medtr1g037280.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr1:13708601-13728159 | 20130731
          Length = 1415

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 65/111 (58%)

Query: 59  ALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVE 118
           AL PL+ A+    L++H D+ V++ +A C++EL RI AP+PP+ED  +++VF LI+    
Sbjct: 62  ALKPLIDAVVCGGLLQHGDKDVKLLVALCVTELFRIKAPEPPFEDKHLRDVFKLIIGLFA 121

Query: 119 NLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           +L D  +  ++KR+ +L  +A+++               EMF  FF  +R+
Sbjct: 122 DLADTKNSLFSKRVKVLDTVAQLKCCLLMLEIDCIDLVLEMFNVFFSAVRD 172


>Medtr1g037280.3 | sister chromatid cohesion PDS5-like protein | HC
           | chr1:13708489-13733416 | 20130731
          Length = 1435

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 65/111 (58%)

Query: 59  ALSPLLKALTADKLMRHSDEGVRVSIASCISELIRITAPDPPYEDDQMKEVFHLIVSAVE 118
           AL PL+ A+    L++H D+ V++ +A C++EL RI AP+PP+ED  +++VF LI+    
Sbjct: 62  ALKPLIDAVVCGGLLQHGDKDVKLLVALCVTELFRIKAPEPPFEDKHLRDVFKLIIGLFA 121

Query: 119 NLHDMSSRSYAKRINILYLLAKVRSXXXXXXXXXXXXXXEMFQHFFKEIRE 169
           +L D  +  ++KR+ +L  +A+++               EMF  FF  +R+
Sbjct: 122 DLADTKNSLFSKRVKVLDTVAQLKCCLLMLEIDCIDLVLEMFNVFFSAVRD 172