Miyakogusa Predicted Gene
- Lj2g3v2510050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2510050.1 tr|G7J7Y9|G7J7Y9_MEDTR MYB transcription factor
MYB174 OS=Medicago truncatula GN=MTR_3g064500 PE=4
S,60.78,0.000002,Myb_DNA-binding,SANT/Myb domain;
Homeodomain-like,Homeodomain-like; OS02G0685200 PROTEIN,NULL;
SWI/S,CUFF.39033.1
(412 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076960.1 | myb transcription factor | HC | chr5:32831868-... 372 e-103
Medtr5g076960.2 | myb transcription factor | HC | chr5:32831868-... 221 9e-58
Medtr3g064500.1 | myb transcription factor | HC | chr3:29064791-... 217 1e-56
Medtr6g477860.1 | myb transcription factor | HC | chr6:28638569-... 125 7e-29
Medtr7g118330.2 | late elongated hypocotyl-like protein | HC | c... 119 6e-27
Medtr7g118330.1 | late elongated hypocotyl-like protein | HC | c... 119 6e-27
Medtr1g067000.2 | myb transcription factor | HC | chr1:28822118-... 96 1e-19
Medtr1g067000.1 | myb transcription factor | HC | chr1:28822118-... 96 1e-19
Medtr8g028655.1 | myb transcription factor | HC | chr8:10999892-... 94 2e-19
Medtr0123s0070.1 | myb transcription factor | HC | scaffold0123:... 94 3e-19
Medtr0123s0070.2 | myb transcription factor | HC | scaffold0123:... 94 3e-19
Medtr1g083180.1 | myb-like DNA-binding domain, shaqkyf class pro... 55 1e-07
Medtr5g075760.1 | myb transcription factor | LC | chr5:32235189-... 50 4e-06
Medtr5g027570.1 | myb-like DNA-binding domain protein | LC | chr... 49 8e-06
Medtr5g088010.1 | MYB-like DNA-binding domain, shaqkyf class pro... 49 9e-06
>Medtr5g076960.1 | myb transcription factor | HC |
chr5:32831868-32828390 | 20130731
Length = 420
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/422 (53%), Positives = 271/422 (64%), Gaps = 46/422 (10%)
Query: 27 GMHLVPCIEKQDDQISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQI 86
GMH V ++K DQ SCGND++LKARKPYTITKQRE+WTD+EH+ FLEALKLYGRAW +I
Sbjct: 9 GMHSVIHVQKLLDQFSCGNDHALKARKPYTITKQREKWTDEEHKKFLEALKLYGRAWRKI 68
Query: 87 EEHVGTKTAVQIRSHAQKVFTKILRETNGNRTTLVASIEIXXXXXXXXXXXXXXXXLVEI 146
EEHVGTKTAVQIRSHAQK F+KI R+T+GN TT+V +IEI LVEI
Sbjct: 69 EEHVGTKTAVQIRSHAQKFFSKINRDTDGNDTTMVETIEIPPPRPKRKPIHPYPRKLVEI 128
Query: 147 PNKEFSITEQPLS-------DFSQENKSPKSALAAAVSETHGSSDSDI------------ 187
P E S EQPL DF QEN SPKS L+A SET G SDSD
Sbjct: 129 PKNEISNLEQPLRSNSLVSLDFGQENNSPKSVLSAVASETLGFSDSDTPAGSLSPVSSIS 188
Query: 188 ---TSSFPLVDPKTSSEEDRSS-PLDGVNGGSAYNMQPLVELEHLSKENVCXXXXXXXXX 243
TS FPL++ K+SS E+ S +D +NGGS +++QPL++LE KE V
Sbjct: 189 AVHTSRFPLLESKSSSSEEDLSQQIDELNGGSTHDVQPLMKLELFPKECVATNEVAAEES 248
Query: 244 XXCTFKLFGTTLLVADICKHSSPTLETIKPIPAMYLMQLQSGCSDI--ATIVPWWTLSSK 301
T KLFGTTLLV D CK S + + +PIPA QLQ GCSDI AT+VPWWT+S
Sbjct: 249 PCRTLKLFGTTLLVKDTCKSSLTSTDASEPIPAT--QQLQRGCSDISLATVVPWWTISDN 306
Query: 302 --------EPEEKYPYPNLTECEDKEVPKEG-SWTGS-STSSVHDEENNERSDDQTRS-Q 350
EPE K+ + N ECEDKE+ KEG S GS STSS+ DEE+NER DDQ +S
Sbjct: 307 SAFKPLHTEPEGKHLHSNHGECEDKEIQKEGSSCVGSNSTSSISDEESNERLDDQAKSDN 366
Query: 351 VHNLVGHTTPSETSAAISDLRVRSKTCGKGFVPYKRCVAKRDNQCSAITDEESEEQCIRL 410
V+ VGHTT +ET VR +T GKGFVPYKRC+A+R+ QCS +TDE E Q +RL
Sbjct: 367 VNYFVGHTTLNET--------VRLRTFGKGFVPYKRCMAERERQCSTVTDERREHQRMRL 418
Query: 411 FL 412
L
Sbjct: 419 SL 420
>Medtr5g076960.2 | myb transcription factor | HC |
chr5:32831868-32828410 | 20130731
Length = 319
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 152/306 (49%), Positives = 183/306 (59%), Gaps = 46/306 (15%)
Query: 143 LVEIPNKEFSITEQPLS-------DFSQENKSPKSALAAAVSETHGSSDSDI-------- 187
LVEIP E S EQPL DF QEN SPKS L+A SET G SDSD
Sbjct: 24 LVEIPKNEISNLEQPLRSNSLVSLDFGQENNSPKSVLSAVASETLGFSDSDTPAGSLSPV 83
Query: 188 -------TSSFPLVDPKTSSEEDRSSP-LDGVNGGSAYNMQPLVELEHLSKENVCXXXXX 239
TS FPL++ K+SS E+ S +D +NGGS +++QPL++LE KE V
Sbjct: 84 SSISAVHTSRFPLLESKSSSSEEDLSQQIDELNGGSTHDVQPLMKLELFPKECVATNEVA 143
Query: 240 XXXXXXCTFKLFGTTLLVADICKHSSPTLETIKPIPAMYLMQLQSGCSDI--ATIVPWWT 297
T KLFGTTLLV D CK S + + +PIPA QLQ GCSDI AT+VPWWT
Sbjct: 144 AEESPCRTLKLFGTTLLVKDTCKSSLTSTDASEPIPAT--QQLQRGCSDISLATVVPWWT 201
Query: 298 LSSK--------EPEEKYPYPNLTECEDKEVPKEG-SWTGS-STSSVHDEENNERSDDQT 347
+S EPE K+ + N ECEDKE+ KEG S GS STSS+ DEE+NER DDQ
Sbjct: 202 ISDNSAFKPLHTEPEGKHLHSNHGECEDKEIQKEGSSCVGSNSTSSISDEESNERLDDQA 261
Query: 348 RS-QVHNLVGHTTPSETSAAISDLRVRSKTCGKGFVPYKRCVAKRDNQCSAITDEESEEQ 406
+S V+ VGHTT +ET VR +T GKGFVPYKRC+A+R+ QCS +TDE E Q
Sbjct: 262 KSDNVNYFVGHTTLNET--------VRLRTFGKGFVPYKRCMAERERQCSTVTDERREHQ 313
Query: 407 CIRLFL 412
+RL L
Sbjct: 314 RMRLSL 319
>Medtr3g064500.1 | myb transcription factor | HC |
chr3:29064791-29066449 | 20130731
Length = 353
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 163/273 (59%), Gaps = 29/273 (10%)
Query: 26 SGMHLVPCIEKQDDQISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQ 85
+G H V I+ DQ+SC ND +LKARKPYTI+KQRERWTD+EH+ FLEALKLYGRAW
Sbjct: 23 AGSHPVTHIQ-LSDQLSCANDYALKARKPYTISKQRERWTDEEHKKFLEALKLYGRAWRS 81
Query: 86 IEEHVGTKTAVQIRSHAQKVFTKILRETNGNRTTLVASIEIXXXXXXXXXXXXXXXXLVE 145
IEEHVG+KTA+QIRSHAQK F+KILR+T+ + T SIEI LVE
Sbjct: 82 IEEHVGSKTAIQIRSHAQKFFSKILRDTSASITNTKESIEIPPPRPKRKPMHPYPRKLVE 141
Query: 146 -IPNKEFSITEQPL-------SDFSQENKSPKSALAAAVSETHGSSDSDI---------- 187
+ KE SI ++ + SDF Q N+SPKS L+ SE+ GSSDSD
Sbjct: 142 TVGTKEISILKKAINSNSLKTSDFDQANQSPKSVLSTLGSESLGSSDSDTPNGSLSPISS 201
Query: 188 -----TSSFPLVDPKTSSEEDRSSPLDGVNGGSAYNMQPLVELEHLSKENVCXXXXXXXX 242
S F + KT SEE+ ++ SA + +PL++LE LS E+V
Sbjct: 202 ISCVRASVFRPAEFKTPSEEEAR-----LDADSAPDEKPLLKLEILSDESVSAKESIAEE 256
Query: 243 XXXCTFKLFGTTLLVADICKHSSPTLETIKPIP 275
T KLFGTTL+V D CK SSPT+E KPIP
Sbjct: 257 SSRPTLKLFGTTLIVKDFCKPSSPTIEACKPIP 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 3/51 (5%)
Query: 354 LVGHTTPSETSAAISDLRVRSK--TCGKGFVPYKRCVAKRDNQCSAITDEE 402
L+G +T ETSA IS LRVR + TCGKGFVPYKRC++K +NQ S+ T +E
Sbjct: 303 LLGKSTLCETSA-ISQLRVRVRRETCGKGFVPYKRCMSKNENQSSSATADE 352
>Medtr6g477860.1 | myb transcription factor | HC |
chr6:28638569-28642957 | 20130731
Length = 467
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%)
Query: 36 KQDDQISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTA 95
K D S GN+ + K RKPYTITKQRE+WTD+EH+ FLEALKLYGR W QIEEH+G+KTA
Sbjct: 32 KSQDIPSVGNNLAPKVRKPYTITKQREKWTDEEHQKFLEALKLYGRGWRQIEEHIGSKTA 91
Query: 96 VQIRSHAQKVFTKILRETNGN 116
+QIRSHAQK F+K++RE +G+
Sbjct: 92 IQIRSHAQKFFSKVVREPDGS 112
>Medtr7g118330.2 | late elongated hypocotyl-like protein | HC |
chr7:49115628-49123834 | 20130731
Length = 754
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%)
Query: 42 SCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRSH 101
S G D LK RKPYTITKQRERWT+ EH FLEALKLYGRAW +IEEH+GTKTAVQIRSH
Sbjct: 7 SSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH 66
Query: 102 AQKVFTKILRETNGNRTTLVASIEI 126
AQK F+K+ +E L +++I
Sbjct: 67 AQKFFSKLEKEALVKGAALGQALDI 91
>Medtr7g118330.1 | late elongated hypocotyl-like protein | HC |
chr7:49115628-49123834 | 20130731
Length = 754
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%)
Query: 42 SCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRSH 101
S G D LK RKPYTITKQRERWT+ EH FLEALKLYGRAW +IEEH+GTKTAVQIRSH
Sbjct: 7 SSGEDVVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH 66
Query: 102 AQKVFTKILRETNGNRTTLVASIEI 126
AQK F+K+ +E L +++I
Sbjct: 67 AQKFFSKLEKEALVKGAALGQALDI 91
>Medtr1g067000.2 | myb transcription factor | HC |
chr1:28822118-28815959 | 20130731
Length = 298
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%)
Query: 42 SCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRSH 101
S G+ + K RKPYTITK RE W+D+EH+ FLEAL+L+ R W +IE+ VG+KT +QIRSH
Sbjct: 28 SGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSH 87
Query: 102 AQKVFTKILR 111
AQK F K+ +
Sbjct: 88 AQKYFLKVQK 97
>Medtr1g067000.1 | myb transcription factor | HC |
chr1:28822118-28815959 | 20130731
Length = 298
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%)
Query: 42 SCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRSH 101
S G+ + K RKPYTITK RE W+D+EH+ FLEAL+L+ R W +IE+ VG+KT +QIRSH
Sbjct: 28 SGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSH 87
Query: 102 AQKVFTKILR 111
AQK F K+ +
Sbjct: 88 AQKYFLKVQK 97
>Medtr8g028655.1 | myb transcription factor | HC |
chr8:10999892-11006608 | 20130731
Length = 333
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 46 DNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRSHAQKV 105
D + K RKPYTITK RE WTD+EH+ FLEAL+L+ R W +IE VG+KT +QIRSHAQK
Sbjct: 49 DPNKKIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKY 108
Query: 106 FTKI 109
F K+
Sbjct: 109 FLKV 112
>Medtr0123s0070.1 | myb transcription factor | HC |
scaffold0123:45193-37242 | 20130731
Length = 307
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 41 ISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRS 100
++ D S K RKPYTITK RE WT+ EH+ FLEAL+L+ R W +IE VG+KT +QIRS
Sbjct: 30 VNSSEDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRS 89
Query: 101 HAQKVFTKI 109
HAQK F K+
Sbjct: 90 HAQKYFLKV 98
>Medtr0123s0070.2 | myb transcription factor | HC |
scaffold0123:45193-37193 | 20130731
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 41 ISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRAWPQIEEHVGTKTAVQIRS 100
++ D S K RKPYTITK RE WT+ EH+ FLEAL+L+ R W +IE VG+KT +QIRS
Sbjct: 30 VNSSEDASKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRS 89
Query: 101 HAQKVFTKI 109
HAQK F K+
Sbjct: 90 HAQKYFLKV 98
>Medtr1g083180.1 | myb-like DNA-binding domain, shaqkyf class
protein | LC | chr1:37028310-37027562 | 20130731
Length = 186
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 57 ITKQRERWTDKEHENFLEALKLYGRA-WPQIEEHVGTKTAVQIRSHAQKVFTKI 109
I K + W +++H FLE + YG+ W +I +HVGTKT Q+ SHAQK F +I
Sbjct: 56 INKGQYHWDEEQHRLFLEGFEKYGKGKWIKIAQHVGTKTTTQVASHAQKHFIRI 109
>Medtr5g075760.1 | myb transcription factor | LC |
chr5:32235189-32236380 | 20130731
Length = 216
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 62 ERWTDKEHENFLEALKLYGRA-WPQIEEHVGTKTAVQIRSHAQKVF 106
+ WT++EH FLE ++++G+ W I +HV T+TA Q+ SHAQK F
Sbjct: 105 KHWTEEEHRLFLEGIEIHGKGKWKLISQHVRTRTASQVASHAQKHF 150
>Medtr5g027570.1 | myb-like DNA-binding domain protein | LC |
chr5:11490573-11491685 | 20130731
Length = 233
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 59 KQRERWTDKEHENFLEALKLYGRA-WPQI-EEHVGTKTAVQIRSHAQKVF 106
++R WT+ EH+ FLE ++ YG+ W I +E V TKT +QI SHAQK F
Sbjct: 89 RERVHWTEGEHKLFLEGIEKYGKGRWKDISKEFVVTKTPIQIASHAQKYF 138
>Medtr5g088010.1 | MYB-like DNA-binding domain, shaqkyf class
protein | LC | chr5:38166107-38167102 | 20130731
Length = 249
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 24 LNSGMHLVPCIEKQDDQISCGNDNSLKARKPYTITKQRERWTDKEHENFLEALKLYGRA- 82
LNS + V + ++ + ++ P + ++ WTD EH+ FL+ LK +G+
Sbjct: 22 LNSNDNNVATLNSDENNLIQAESGPEESHPPGRVQRKSIHWTDDEHKLFLKGLKKHGKGR 81
Query: 83 WPQI-EEHVGTKTAVQIRSHAQKVF 106
W I +E V TKT QI SHAQK F
Sbjct: 82 WKDISKEFVVTKTPTQIASHAQKYF 106