Miyakogusa Predicted Gene

Lj2g3v2509010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2509010.1 Non Characterized Hit- tr|I3ST41|I3ST41_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.14,0,seg,NULL;
APG5,Autophagy-related protein 5; SUBFAMILY NOT NAMED,NULL; AUTOPHAGY
PROTEIN 5,Autophagy-,CUFF.39032.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g076920.1 | autophagy protein Apg5 | HC | chr5:32813118-32...   558   e-159
Medtr5g076920.2 | autophagy protein Apg5 | HC | chr5:32813083-32...   337   1e-92

>Medtr5g076920.1 | autophagy protein Apg5 | HC |
           chr5:32813118-32806624 | 20130731
          Length = 361

 Score =  558 bits (1439), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/361 (77%), Positives = 304/361 (84%), Gaps = 12/361 (3%)

Query: 1   MSEAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLISLLKPHFSSTLPP 60
           M+E Q+YVW G+IPLQIHLHESE               R+GYLPLLISLLKPHF +TLPP
Sbjct: 1   MNEGQEYVWMGSIPLQIHLHESEVTTLPPPPPALVLAPRMGYLPLLISLLKPHFCTTLPP 60

Query: 61  GQDTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPSNLLLPCEGEDSVKW 120
           G DTIWFEYKGLPLKWYIPTGVLFDLLC+EPERPWNLTVHFRGYPSNLLLPC+GEDSVKW
Sbjct: 61  GVDTIWFEYKGLPLKWYIPTGVLFDLLCMEPERPWNLTVHFRGYPSNLLLPCDGEDSVKW 120

Query: 121 SFINSLKEAAYVINGNCKNVMNMSQPDQVELWGSVLNGNLESYRRVSSKLKL-------- 172
           SFINSLKEAAYVINGNCKNVMNMSQ DQVELWGSVLNGNLESYRRVSSKLKL        
Sbjct: 121 SFINSLKEAAYVINGNCKNVMNMSQTDQVELWGSVLNGNLESYRRVSSKLKLETIEDFVP 180

Query: 173 --GTFEDKHTENINSVLPKSE-STGDTDAAGQVKSGRIPVRLYVWTVNEEFDDFEDAPQV 229
              T ED+HTENI+SV  KSE STGD +AAGQVK+ RIPVRLY+WTVN +FDDFEDAP +
Sbjct: 181 KKETIEDEHTENIDSVSNKSEQSTGDAEAAGQVKTSRIPVRLYLWTVNNDFDDFEDAPNI 240

Query: 230 DDWDKVSYINRPVEIHNEDGKFFSLNDAVRRLLPEFFQGSSFDNEGDTNINRTTEEGENS 289
           D+WDKVSYINRPVEI+ ED K+FSLNDAV+RLLPE+F  SSF NE D NIN++TEEGENS
Sbjct: 241 DNWDKVSYINRPVEIYKEDDKYFSLNDAVKRLLPEYFPESSFVNEEDANINQSTEEGENS 300

Query: 290 GDPGSSFDAHEIAEIKLVRIQGIEPI-LEIPFSWVVNNLMNPEYFLHMCVCLKISEASAV 348
            DP SS    EIAEIK VRIQGI  + LEIPFSWVV+NLMNPEYFLHMCVCLK+SEA+ V
Sbjct: 301 SDPASSSHPLEIAEIKCVRIQGISDLPLEIPFSWVVHNLMNPEYFLHMCVCLKVSEANPV 360

Query: 349 Q 349
           Q
Sbjct: 361 Q 361


>Medtr5g076920.2 | autophagy protein Apg5 | HC |
           chr5:32813083-32806624 | 20130731
          Length = 263

 Score =  337 bits (863), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/215 (78%), Positives = 179/215 (83%), Gaps = 11/215 (5%)

Query: 1   MSEAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLISLLKPHFSSTLPP 60
           M+E Q+YVW G+IPLQIHLHESE               R+GYLPLLISLLKPHF +TLPP
Sbjct: 1   MNEGQEYVWMGSIPLQIHLHESEVTTLPPPPPALVLAPRMGYLPLLISLLKPHFCTTLPP 60

Query: 61  GQDTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPSNLLLPCEGEDSVKW 120
           G DTIWFEYKGLPLKWYIPTGVLFDLLC+EPERPWNLTVHFRGYPSNLLLPC+GEDSVKW
Sbjct: 61  GVDTIWFEYKGLPLKWYIPTGVLFDLLCMEPERPWNLTVHFRGYPSNLLLPCDGEDSVKW 120

Query: 121 SFINSLKEAAYVINGNCKNVMNMSQPDQVELWGSVLNGNLESYRRVSSKLKL-------- 172
           SFINSLKEAAYVINGNCKNVMNMSQ DQVELWGSVLNGNLESYRRVSSKLKL        
Sbjct: 121 SFINSLKEAAYVINGNCKNVMNMSQTDQVELWGSVLNGNLESYRRVSSKLKLETIEDFVP 180

Query: 173 --GTFEDKHTENINSVLPKSE-STGDTDAAGQVKS 204
              T ED+HTENI+SV  KSE STGD +AAGQVK+
Sbjct: 181 KKETIEDEHTENIDSVSNKSEQSTGDAEAAGQVKT 215