Miyakogusa Predicted Gene

Lj2g3v2507940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2507940.1 CUFF.39018.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g076600.1 | hypothetical protein | HC | chr5:32682517-3268...   106   4e-24

>Medtr5g076600.1 | hypothetical protein | HC |
          chr5:32682517-32683147 | 20130731
          Length = 60

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 57/60 (95%), Gaps = 1/60 (1%)

Query: 1  MRIFGKHVFPRQIILFASGLLVLSATTYDVHRSIKNNQTPPSEEQLKALQDYIKS-RRSP 59
          MRIFGK VFPRQIILFASGLL L++TTYDVHRSIKNN+TPPSEEQLKAL++YIKS RRSP
Sbjct: 1  MRIFGKPVFPRQIILFASGLLFLASTTYDVHRSIKNNETPPSEEQLKALEEYIKSVRRSP 60