Miyakogusa Predicted Gene
- Lj2g3v2496750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2496750.1 Non Characterized Hit- tr|I1L016|I1L016_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39218
PE,33.91,7e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; A_tha_TIGR01569: p,CUFF.39021.1
(207 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC | chr5:32632... 290 9e-79
Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC | chr3:28945... 266 1e-71
Medtr0160s0040.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 121 4e-28
Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 92 4e-19
Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 91 6e-19
Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 67 9e-12
Medtr0693s0030.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 60 2e-09
Medtr7g083120.1 | plant integral membrane protein | HC | chr7:31... 59 3e-09
Medtr7g011090.1 | casparian strip membrane protein | HC | chr7:2... 57 9e-09
Medtr4g081880.1 | casparian strip membrane protein | HC | chr4:3... 55 4e-08
Medtr2g086740.1 | plant integral membrane protein | HC | chr2:36... 53 2e-07
Medtr5g041900.1 | casparian strip membrane protein | HC | chr5:1... 50 1e-06
Medtr7g108130.1 | plant integral membrane protein | HC | chr7:43... 49 4e-06
Medtr1g058560.1 | casparian strip membrane protein | HC | chr1:2... 48 7e-06
Medtr2g020060.1 | plant integral membrane protein | HC | chr2:66... 48 8e-06
>Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC |
chr5:32632182-32630106 | 20130731
Length = 209
Score = 290 bits (741), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 168/212 (79%), Gaps = 8/212 (3%)
Query: 1 MEKGNVVEATTRSSMRHG----DEEIEGN-TNILRIVETFLRLFPIGLCVTALVIMLKNS 55
M+KG VE TRSS+ G DEE EG ++LRIVETFLRLFPI LCVTAL+IMLKNS
Sbjct: 1 MDKGIGVELATRSSIEMGNSVVDEEFEGKEASLLRIVETFLRLFPICLCVTALIIMLKNS 60
Query: 56 QENEYGTLDYTDLSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRAWTFFVLDQLLTY 115
+ENEYG++ Y+DL AFRYLVHANGICAGYSLFSAVI+A+PRPSTMP+AW FF+LDQ+ TY
Sbjct: 61 EENEYGSVAYSDLGAFRYLVHANGICAGYSLFSAVIVAVPRPSTMPKAWAFFLLDQVQTY 120
Query: 116 IILAAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLIS 175
IILAAGA+ EVLYL E G P A WSSACG FG FCHK AS+ ITF+AV+CY++LSLIS
Sbjct: 121 IILAAGAVLTEVLYLAEYGVPTAGWSSACGSFGSFCHKIKASLVITFIAVVCYILLSLIS 180
Query: 176 SYKLFSKYDAPAPPMXXXXXXXKGIDIAPFHG 207
SY+LFSKYDAPA K I IA F+G
Sbjct: 181 SYRLFSKYDAPAE---FNNNSNKDIGIAAFNG 209
>Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC |
chr3:28945240-28941390 | 20130731
Length = 217
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 154/199 (77%), Gaps = 13/199 (6%)
Query: 1 MEKGN-VVEATTRSSMR----------HGDEEIEGNT-NILRIVETFLRLFPIGLCVTAL 48
MEKGN V + TRS M+ EE+EGNT + LR ETFLRL PIGLCV AL
Sbjct: 2 MEKGNATVVSATRSPMQVMMAPAAAAAATGEELEGNTTSFLRTAETFLRLLPIGLCVAAL 61
Query: 49 VIMLKNSQENEYGTLDYTDLSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRAWTFFV 108
V+MLKNS+EN+YG++ Y DL AFRYLVHANGICAGYSL SAV++A PRP T+ RAWTFF
Sbjct: 62 VLMLKNSEENDYGSVSYNDLGAFRYLVHANGICAGYSLLSAVVVAAPRP-TLLRAWTFFF 120
Query: 109 LDQLLTYIILAAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICY 168
LDQ+LTYIIL+AGA SMEV+YL E GD W+SACG FG FCHK TAS+AITFVA+ CY
Sbjct: 121 LDQVLTYIILSAGASSMEVVYLAENGDSATVWNSACGSFGQFCHKVTASVAITFVALFCY 180
Query: 169 VVLSLISSYKLFSKYDAPA 187
V+LSLISS+KLFS YD PA
Sbjct: 181 VILSLISSFKLFSNYDVPA 199
>Medtr0160s0040.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0160:28011-30206 | 20130731
Length = 187
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 17 HGDEEIEGNTNI--LRIVETFLRLFPIGLCVTALVIMLKNSQEN-EYGTLDYTDLSAFRY 73
H D+ G N+ L+++++ LRL + L + + I + N Q+N YGTL Y+D+S +Y
Sbjct: 5 HIDDNASGENNLPMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGLKY 64
Query: 74 LVHANGICAGYSLFSAVIIALPRPSTMPRAWTFFVLDQLLTYIILAAGALSMEVLYLTEK 133
++ + +CAGY++ +AV + M +AW FF+ DQ++ Y+++ + A +ME+ YL
Sbjct: 65 MIFVSALCAGYAIVAAVCSWVRY--LMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYN 122
Query: 134 GDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKLFSKYDAPA 187
G +WS AC +G FC K ++ + + C+ VL++IS+++ FS +D P+
Sbjct: 123 GAREDSWSQACSSYGKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPPS 176
>Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 181
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 29 LRIVETFLRLFPIGLCVTALVIMLKNSQENEYGTLD----YTDLSAFRYLVHANGICAGY 84
+RI E LR +GL V A+V+++ +SQ E+ T+ +TD+ A +LV AN I AGY
Sbjct: 8 VRITELVLRFVNLGLGVLAVVLIVTDSQVREFFTIQKKAKFTDMKALVFLVVANAIAAGY 67
Query: 85 SLFSAV--IIALPRPSTM---PRAWTFFVLDQLLTYIILAAGALSMEVLYLTEKGDPPAA 139
SL + ++++ + S + P AW F DQ++ YI +AA + + + + G
Sbjct: 68 SLIQGLRCVVSMIKGSVLFNKPLAWAIFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQLQ 127
Query: 140 WSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKLFSKY 183
W C +G FC++ +A F+ + VV+S IS++ LF Y
Sbjct: 128 WMKICNMYGKFCNQVGEGLASAFLVSLSMVVVSCISAFSLFRLY 171
>Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 201
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 29 LRIVETFLRLFPIGLCVTALVIMLKNSQENEYGTLD----YTDLSAFRYLVHANGICAGY 84
+RI E LR +GL V A+V+++ +SQ E+ T+ +TD+ A +LV AN I AGY
Sbjct: 28 VRITELVLRFVNLGLGVLAVVLIVTDSQVREFFTIQKKAKFTDMKALVFLVVANAIAAGY 87
Query: 85 SLFSAV--IIALPRPSTM---PRAWTFFVLDQLLTYIILAAGALSMEVLYLTEKGDPPAA 139
SL + ++++ + S + P AW F DQ++ YI +AA + + + + G
Sbjct: 88 SLIQGLRCVVSMIKGSVLFNKPLAWAIFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQLQ 147
Query: 140 WSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKLFSKY 183
W C +G FC++ +A F+ + VV+S IS++ LF Y
Sbjct: 148 WMKICNMYGKFCNQVGEGLASAFLVSLSMVVVSCISAFSLFRLY 191
>Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0004:83573-81269 | 20130731
Length = 163
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 30 RIVETFLRLFPIGLCVTALVIMLKNSQENEYGTLD----YTDLSAFRYLVHANGICAGYS 85
RI LR ++A+V+M+ + ++ + T+ YT+ AF+Y V AN I Y
Sbjct: 6 RICHLLLRFLAFSATLSAVVVMVSSHEKASFFTVSFEAKYTNSPAFKYFVIANSIVTVYG 65
Query: 86 LFSAVIIALPRPSTMPRAWTFFV-LDQLLTYIILAAGALSMEVLYLTEKGDPPAAWSSAC 144
F ++ LP S + W V +D +LT +++++ + ++ + + + G+ AAW C
Sbjct: 66 FF---VLFLPAESLL---WRLVVAMDMVLTMLLISSISAALAIAQVAKNGNNYAAWLPIC 119
Query: 145 GYFGPFCHKATASIAITFVAVICYVVLSL 173
G FC+ T ++ +F+ VI Y++L L
Sbjct: 120 GSVPKFCNHMTGALVASFIGVIIYLILLL 148
>Medtr0693s0030.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0693:2778-4089 | 20130731
Length = 184
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 65 YTDLSAFRYLVHANGICAGYSLFSAVIIALPRPST---------MPRAWTFFVLDQLLTY 115
Y DL A + L++ AGY++ + ST M AW F+LDQ++ Y
Sbjct: 46 YKDLDALKILLYVTSAAAGYNMLQLCKHSFSACSTIRNFNDSYYMHMAWISFLLDQIVVY 105
Query: 116 IILAAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLIS 175
+ A + E G W C F FC++ +I ++A I ++S IS
Sbjct: 106 LTFATNTSAFEACLFALTGSEAFQWMKVCNKFTRFCYQIGGAILCCYIASILMAMISTIS 165
Query: 176 SYKLFSKYD 184
+YK+ Y
Sbjct: 166 AYKVLRMYS 174
>Medtr7g083120.1 | plant integral membrane protein | HC |
chr7:31937630-31935708 | 20130731
Length = 186
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 8 EATTRSSMRHGDEEIEGNTNILRIVETFLRLFPIGLCVTALVIMLKNSQENEYGTLDYTD 67
+TT +S +H + +V+ LR+ I L ++V+ + N+Q ++ +
Sbjct: 14 SSTTSTSQKHHRTFL--------MVQNILRILVIVLTAVSIVVTVTNNQSVMLFSIRFEA 65
Query: 68 ----LSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRA---WTFFVLDQLLTYIILAA 120
S+F++ V ANG+ S+ + + L R T R + F++D ++T +++A
Sbjct: 66 HFYYTSSFKFFVAANGVVCFMSVLTLIFNLLMRQQTPQRKDYYFLLFLVDLVMTVLLIAG 125
Query: 121 GALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKLF 180
+ + V Y+ + G+ W++ C + FC S+ ++++A + L+++ +YK
Sbjct: 126 CSAATAVGYVGQYGEKHVGWTAICDHVQKFCKTNLISLLLSYLAFFANLGLTILIAYKFT 185
Query: 181 S 181
S
Sbjct: 186 S 186
>Medtr7g011090.1 | casparian strip membrane protein | HC |
chr7:2905231-2907425 | 20130731
Length = 186
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 64 DYTDLSAFRYLVHANGICAGYSLFSAVIIA--LPRPSTMPRAWTFFVLDQLLTYIILAAG 121
+Y DL R+ V A+ I +GY + S + + R S F +LD ++ ++ A
Sbjct: 66 NYDDLPTLRFFVVASAIVSGYLILSLPLSILHIIRSSAGMTRVIFIILDTVMLGLLTAGS 125
Query: 122 ALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKL 179
+ + ++YL KG+ A W + C + FC + + S+ +F+A+ +++L L+S+ L
Sbjct: 126 SAAASIVYLAHKGNRKANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLSALVL 183
>Medtr4g081880.1 | casparian strip membrane protein | HC |
chr4:31869526-31871135 | 20130731
Length = 189
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 1 MEKGNVVEATT--RSSMRHGDEEIEGNTNILRIVETFLRLFPIGLCVTALVIMLKNSQEN 58
+E G + + + R M+ G L I++ LR+F + + + M Q
Sbjct: 6 IESGEISKGASSPRKGMKRG----------LSIMDFILRIFAAMSTLGSALSMGTAKQTM 55
Query: 59 EYGT------LDYTDLSAFRYLVHANGICAGYSLFSAVI--IALPRPSTMPRAWTFFVLD 110
+ T + + DL F + V AN I GY S V+ + R ++ LD
Sbjct: 56 PFATRFVRFKVSFHDLPTFLFFVTANSIVCGYLALSLVLSFFHIVRTISVKSRILLVFLD 115
Query: 111 QLLTYIILAAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVV 170
++ ++ + + + ++Y+ G+P A W C + FC + + S+ +F+AV+ +++
Sbjct: 116 TVMFGLLTSGASAAAAIVYVAHYGNPSANWFPFCQQYNSFCGRISGSLVGSFIAVVIFMI 175
Query: 171 LSLIS 175
L L+S
Sbjct: 176 LILMS 180
>Medtr2g086740.1 | plant integral membrane protein | HC |
chr2:36464677-36466663 | 20130731
Length = 220
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 31 IVETFLRLFPIGLCVTALVIMLKNSQENEYGTL------DYTDLSAFRYLVHANGICAGY 84
I++ LRL IG + A VIM N Q + T + D F++ V ANG AG+
Sbjct: 61 ILDFILRLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFVVANGAAAGF 120
Query: 85 SLFSA--VIIALPRPSTMPRAWTFFVLDQLLTYIILAAGALSMEVLYLTEKGDPPAAWSS 142
+ S I+ + RP + ++D +L +++AA + + V+YL G A W++
Sbjct: 121 LILSLPFSIVCIVRPLAAGPRFLLVIVDLVLMALVVAAASSAAAVVYLAHNGSQDANWNA 180
Query: 143 ACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKL 179
C F FC ++ ++ +FVA + L ++SS L
Sbjct: 181 ICQQFTDFCQGSSLAVVASFVASVFLACLVVVSSVAL 217
>Medtr5g041900.1 | casparian strip membrane protein | HC |
chr5:18399261-18401571 | 20130731
Length = 186
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 64 DYTDLSAFRYLVHANGICAGYSLFSAVIIA--LPRPSTMPRAWTFFVLDQLLTYIILAAG 121
+Y DL +F + V AN I GY S ++ + R + + VLD ++ ++ AA
Sbjct: 66 EYDDLPSFVFFVLANSIVCGYLALSLILSILHIVRSTAVKSRILLIVLDMVMMGLLAAAA 125
Query: 122 ALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISS 176
+ + ++Y+ G+ A W C + FC + + S+ +++AV ++++ L+S
Sbjct: 126 SAAASIVYIAHYGNTQANWFPICQQYNSFCERISGSLIGSYIAVALFIIIILLSQ 180
>Medtr7g108130.1 | plant integral membrane protein | HC |
chr7:43972040-43974109 | 20130731
Length = 191
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 17 HGDEEI-EGNTNILRIVETFLRLFPIGLCVTALVIML--KNSQENEYGTLDYTD------ 67
H D ++ E T +++ LR+ L +TA +I+ K ++ Y +L +
Sbjct: 13 HSDVKVLEMKTKRSNVLDVLLRVLGFLLTLTATIIVGFGKETKVISYASLQFKVTAKWEY 72
Query: 68 LSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRAWTFF-VLDQLLTYIILAAGALSME 126
+SA + + N I Y+ S V+ + R S A +LD ++ ++ +A +
Sbjct: 73 MSAIVFFLVTNAIGCSYAAISMVVSTIARTSGNKTALLMITLLDLVIMALLFSANGAAGA 132
Query: 127 VLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYKL 179
V L +KG+ W C F +C T ++ ++ + +++L S +KL
Sbjct: 133 VGVLGQKGNSHVQWMKVCNVFDAYCRHMTVALVLSIIGSTVFLLLVAHSLFKL 185
>Medtr1g058560.1 | casparian strip membrane protein | HC |
chr1:25810191-25808737 | 20130731
Length = 195
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 65 YTDLSAFRYLVHANGICAGYSLFSA--VIIALPRP-STMPRAWTFFVLDQLLTYIILAAG 121
Y AF++ + A I AGY + S I+A+ RP +T PR + +LD + + A+
Sbjct: 76 YDSFPAFQFFLIAMAIVAGYLVLSLPFSIVAIIRPHATGPRLF-LIILDTVFLTLATASA 134
Query: 122 ALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFV 163
A + ++YL G+ W + C FG FC + + ++ +F+
Sbjct: 135 ASAASIVYLAHNGNQDTNWLAICNQFGDFCAQTSGAVVASFI 176
>Medtr2g020060.1 | plant integral membrane protein | HC |
chr2:6650859-6647324 | 20130731
Length = 189
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 17 HGDEEIEGNTNILRIVE----TFLRLFPIGLCVTALVIMLKNSQENEYG----------- 61
+E++ N I +E LRL + L +TA V+++ + Q
Sbjct: 4 QSTKELKENVVIKSSLEGTCSMVLRLCALVLTLTAAVVLVADKQTTVVPVKISDSLPPLD 63
Query: 62 ---TLDYTDLSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRAWTFFVLDQLLTYIIL 118
T + +SA+ Y V AN I Y+ S VI + +LD ++ ++
Sbjct: 64 VPVTAKWQYVSAYVYFVVANFIAFAYATLSFVIALANGHKSKLLVTLVTLLDAIMVALLF 123
Query: 119 AAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSLISSYK 178
+ + + L EKG+ W+ C F FC++A A+ I+ + I ++ L ++ + +
Sbjct: 124 SGNGAAWAIGVLAEKGNSHVMWNKVCHVFDKFCNQAAAACLISLLGSIVFLSLVMLPALR 183
Query: 179 LFSK 182
L +
Sbjct: 184 LHRR 187