Miyakogusa Predicted Gene
- Lj2g3v2485560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2485560.1 Non Characterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.41,0.00000000000003,AAA_12,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; SUBFAMILY NOT NAMED,NULL;
DN,CUFF.38998.1
(160 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 250 4e-67
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 241 2e-64
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 241 3e-64
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 236 5e-63
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 232 9e-62
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 223 7e-59
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 221 3e-58
Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase super... 183 7e-47
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 169 1e-42
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 154 5e-38
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 152 1e-37
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 96 2e-20
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 96 2e-20
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 92 2e-19
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 92 3e-19
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 89 1e-18
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 87 5e-18
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 86 1e-17
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 82 2e-16
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 82 2e-16
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 76 1e-14
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 76 1e-14
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 76 1e-14
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 76 1e-14
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 76 1e-14
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 76 1e-14
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 72 2e-13
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 52 2e-07
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 250 bits (639), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/160 (78%), Positives = 140/160 (87%), Gaps = 1/160 (0%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
ML+VQYRMHPSISMFPSKEFY+G+L DA VRE+SY+K FLEGKMY SYSFINISKGKEQ
Sbjct: 624 MLDVQYRMHPSISMFPSKEFYDGQLSDANIVREISYNKRFLEGKMYGSYSFINISKGKEQ 683
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
NHD SLKN++EAAAI+EIIG LKK R R K+SIGIISPYKAQV EIQE+VKQ++ V
Sbjct: 684 CNHDHSLKNVIEAAAISEIIGRLKKEFVRARNKVSIGIISPYKAQVHEIQEKVKQYM-VS 742
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
D FSVSVRSVDGFQGGEED+IIISTVRSN +G VGFLSN
Sbjct: 743 DPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKVGFLSN 782
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 241 bits (614), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLNVQYRMHPSIS+FPS+EFYN KL D+ VRE+SY+K FL GKMY SYSFINISKGKEQ
Sbjct: 649 MLNVQYRMHPSISIFPSREFYNKKLSDSQIVREISYNKRFLGGKMYGSYSFINISKGKEQ 708
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
NHD SLKN++EAAAI+EIIG ++K RTR K+SIGIISPYKAQV EIQERVKQ++ V
Sbjct: 709 CNHDHSLKNVIEAAAISEIIGRIQKEFVRTRNKVSIGIISPYKAQVHEIQERVKQYM-VS 767
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
FS++VRSVDGFQGGEEDLIIISTVRSN G VGFLSN
Sbjct: 768 APNFSINVRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSN 807
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/160 (73%), Positives = 137/160 (85%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLNVQYRMHP+ISMFP KEFY+ ++ DAP V++ SY K FLEG+MYASYSFINI+KGKE+
Sbjct: 638 MLNVQYRMHPAISMFPCKEFYDEQISDAPVVKDASYKKSFLEGEMYASYSFINIAKGKEK 697
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
S SLKNMVE A I+E+I NLKK RT+ K+SIGIISPY AQV+EIQE+VKQ+ SV
Sbjct: 698 SGRGHSLKNMVEVAVISEMINNLKKEFKRTQKKVSIGIISPYNAQVYEIQEKVKQYTSVS 757
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
DT FSVSVRS+DGFQGGEED+IIISTVRSN +GNVGFLSN
Sbjct: 758 DTDFSVSVRSIDGFQGGEEDIIIISTVRSNGSGNVGFLSN 797
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 236 bits (603), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/160 (73%), Positives = 136/160 (85%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLNVQYRMHPSIS+FP KEFY+GK+ DA V + Y+KHFLEGKMYASYSFINI+KGKEQ
Sbjct: 627 MLNVQYRMHPSISLFPCKEFYDGKISDAVIVGKEKYNKHFLEGKMYASYSFINIAKGKEQ 686
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
+ SLKNMVE A I++I+ +LK RT+ K+SIGIISPY AQVFEIQE+VKQ+++V
Sbjct: 687 FGRENSLKNMVEVAVISKILESLKHEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVS 746
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
DT FSVSVRSVDGFQGGEED+IIISTVRSN +G VGFLSN
Sbjct: 747 DTDFSVSVRSVDGFQGGEEDIIIISTVRSNESGKVGFLSN 786
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 232 bits (592), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/160 (70%), Positives = 134/160 (83%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
+LN QYRMHPSIS+FP+KEFY +L DAP VRE+SY++ FLEGKMYASYSFINI+KGKEQ
Sbjct: 628 LLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSYNRCFLEGKMYASYSFINIAKGKEQ 687
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
S KNMVEAA I++IIG+LK+ RTR K+SIGIISPY AQV+EIQE++K + S+
Sbjct: 688 RGRGHSSKNMVEAAVISKIIGSLKEEFHRTRKKVSIGIISPYNAQVYEIQEKIKPNNSIS 747
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
D FSVSVRSVDGFQGGEED+IIISTVRSN + +GFLSN
Sbjct: 748 DPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSN 787
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 223 bits (568), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 133/161 (82%), Gaps = 1/161 (0%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLN+QYRMHPSIS+FP KEFY+ KL DAP V+E+SY+K FL G MY+SYSFINI+KGKE+
Sbjct: 604 MLNIQYRMHPSISLFPCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEK 663
Query: 61 SNH-DFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSV 119
H SLKNMVE A I+E+I +L KV RT+ K+SIGIISPY AQV EIQE+VKQ+
Sbjct: 664 LGHCGQSLKNMVEVAVISEMIKSLNKVFMRTKKKVSIGIISPYNAQVNEIQEKVKQYTWD 723
Query: 120 YDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+ FSV+VRSVDGFQGGEED+IIISTVRSN +GNVGFLSN
Sbjct: 724 TTSDFSVNVRSVDGFQGGEEDIIIISTVRSNGSGNVGFLSN 764
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 221 bits (562), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLNVQYRMHPSIS+FP KEFY+GKL DAP V E SY+K FLEG+MY+SYSFINI+KGKEQ
Sbjct: 652 MLNVQYRMHPSISLFPCKEFYDGKLCDAPVVGEESYNKLFLEGEMYSSYSFINIAKGKEQ 711
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
H SLKNMVE A I+EII +L +V +TR K+SIGI+SPY AQV+EIQE ++Q+ V
Sbjct: 712 FGHGQSLKNMVEVAVISEIIKSLYEVFMKTRKKVSIGIVSPYNAQVYEIQEEIEQYTKVA 771
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSN-RNGNVGF 157
++ FSV+VRSVDGFQGGEED+IIISTVRSN R NV
Sbjct: 772 NSKFSVNVRSVDGFQGGEEDIIIISTVRSNGRRTNVAL 809
>Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32648280-32643985 |
20130731
Length = 857
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 116/160 (72%), Gaps = 17/160 (10%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
MLNVQYRMHPSIS+FP KEFY+ K DA V++ SY+K FLEG+MY+SYSFINISKGKE+
Sbjct: 624 MLNVQYRMHPSISLFPCKEFYDEKNLDALAVKDQSYNKSFLEGEMYSSYSFINISKGKEK 683
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
H SLKNMVE A I+EII NL+K RT+ K+SIGIISPY AQV+EIQE+VKQ
Sbjct: 684 FGHGHSLKNMVEVAVISEIIKNLRKEFMRTKKKVSIGIISPYNAQVYEIQEKVKQDTWDS 743
Query: 121 DTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
++ FSV+VRSVD + +GNVGFLSN
Sbjct: 744 NSDFSVNVRSVD-----------------DGSGNVGFLSN 766
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 118/162 (72%), Gaps = 3/162 (1%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
+LNVQYRMHPSIS+FP+ +FY+ +L D+P+V+E +Y+KHFL M+ S+SFI+++ G+++
Sbjct: 706 LLNVQYRMHPSISLFPNMQFYDNQLVDSPSVKEKNYEKHFLSADMFKSFSFIDVAFGEDE 765
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHV--S 118
+ S +NMVE A ++ I+ NL K + +S+G+ISPYKAQV IQ+ + +
Sbjct: 766 LDEGSSRRNMVEVAVVSGIVLNLYKESVSRKQTVSVGVISPYKAQVVAIQDTLDKRFGGD 825
Query: 119 VYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
V D FSV V +VDGFQGGEED+IIISTVR N G VGF+SN
Sbjct: 826 VNDG-FSVKVSTVDGFQGGEEDVIIISTVRHNSMGVVGFISN 866
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 117/162 (72%), Gaps = 4/162 (2%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ 60
+LN Q+RMHP IS+FP+ FY+ K+ D+PNV+ +Y K +L G M+ +YSFIN++ G+E+
Sbjct: 639 LLNTQHRMHPEISLFPNSYFYSNKINDSPNVQR-NYGKKYLPGPMFGTYSFINVAGGREE 697
Query: 61 SNHD-FSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQ-HVS 118
+ D S KN+ E A + I+ NL KV + KLSIGI+SPY QV +IQE++ + S
Sbjct: 698 FDDDGRSYKNIAEVAVVMTILKNLHKVWLAKKEKLSIGIVSPYAGQVLKIQEKLAMMNYS 757
Query: 119 VYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+D F+V+V+S+DGFQGGE+D+II+STVR+N ++ F+S+
Sbjct: 758 SHDG-FNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISS 798
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 112/162 (69%), Gaps = 6/162 (3%)
Query: 2 LNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ- 60
LN+QYRMHP+IS FP+ FY ++ DAPNV +Y K +L G+M+ YSFINI G E+
Sbjct: 619 LNIQYRMHPAISSFPNSCFYLNQILDAPNVISKNYRKQYLPGQMFGPYSFINIIGGTEEF 678
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
+ S KN+VE + +II N + + LSIG++SPY AQVF IQ+ + + Y
Sbjct: 679 DDAGRSQKNIVEMVVVMQIIKNCFRAWRDSNENLSIGVVSPYAAQVFAIQDMLGRR---Y 735
Query: 121 DTY--FSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
D++ FSV V+++DGFQGGE+D+II+STVR++ + ++GF+SN
Sbjct: 736 DSHEGFSVKVKTIDGFQGGEQDIIILSTVRTDCSTSLGFISN 777
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
ML QYRMHP I FPS EFYN L D V+ + ++ + + + +SF +I +GKE
Sbjct: 547 MLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVK-IQTERDWHRYRCFGPFSFFDIHEGKEA 605
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSV 119
+ + S N+ E + + L + ++ + IISPYKAQV Q+R ++ V
Sbjct: 606 RPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYKAQVNLFQQRFEETFGV 665
Query: 120 YDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
V + +VDG QG E+D+ I S VR+++ G +GFL +
Sbjct: 666 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDD 705
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
ML QYRMHP I FPS EFYN L D V+ + ++ + + + +SF +I +GKE
Sbjct: 547 MLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVK-IQTERDWHRYRCFGPFSFFDIHEGKEA 605
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSV 119
+ + S N+ E + + L + ++ + IISPYKAQV Q+R ++ V
Sbjct: 606 RPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYKAQVNLFQQRFEETFGV 665
Query: 120 YDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
V + +VDG QG E+D+ I S VR+++ G +GFL +
Sbjct: 666 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDD 705
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 92.4 bits (228), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
+L+VQYRMHP I FPS+ FY G+L D+ +V +L D+ + + + Y F +I G+E
Sbjct: 557 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLP-DEAYYKDPLLRPYIFYDIRHGRES 615
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKK-VCARTRTKLSIGIISPYKAQVFEIQERVKQHVS 118
S +N+ EA + +++K V + K+S+GII+PYK Q+ +Q ++ ++
Sbjct: 616 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 675
Query: 119 VYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+ + + +VD FQG E D+II+S VR++ +G VGF+++
Sbjct: 676 SEEGK-DIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVAD 715
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 91.7 bits (226), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
+L+VQYRMHP I FPS+ FY G+L D+ +V +L D+ + + + Y F +I G+E
Sbjct: 845 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLP-DEAYYKDPLLRPYIFYDIRHGRES 903
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKK-VCARTRTKLSIGIISPYKAQVFEIQERVKQHVS 118
S +N+ EA + +++K V + K+S+GII+PYK Q+ +Q ++ ++
Sbjct: 904 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 963
Query: 119 VYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+ + + +VD FQG E D+II+S VR++ +G VGF+++
Sbjct: 964 SEEGK-DIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVAD 1003
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 11/165 (6%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
+L+VQYRMHP I FPS+ FY G+L D+ +V +L D+ + + + Y F +I G+E
Sbjct: 1062 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLP-DEAYYKDPLLRPYIFYDIRHGRES 1120
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKK-VCARTRTKLSIGIISPYKAQVFEIQ---ERVKQ 115
S +N+ EA + +++K V + K+S+GII+PYK Q+ +Q E V
Sbjct: 1121 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 1180
Query: 116 HVSVYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
D Y + +VD FQG E D+II+S VR++ +G VGF+++
Sbjct: 1181 SEEGKDIY----INTVDAFQGQERDVIIMSCVRASTHG-VGFVAD 1220
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
ML QYRMHP I FPS EFY+ L D V+ + ++ + + + +SF +I +GKE
Sbjct: 101 MLKTQYRMHPEIRSFPSMEFYDNSLEDGEGVK-IQTERDWHRYRCFGPFSFFDIHEGKEA 159
Query: 60 QSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSV 119
+ + S N+ E + + L + ++ + IISPY QV ++R ++ V
Sbjct: 160 KPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYSGQVNLFKQRFEETFGV 219
Query: 120 YDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
V + +VDG QG E+D+ I S VR+++ G +GF+ +
Sbjct: 220 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFVDD 259
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKE- 59
ML QYRMHP I FPS FY+ KL + + S F E K Y+F +I G+E
Sbjct: 1858 MLTEQYRMHPEICKFPSLHFYDNKLLNGSQMS--SKSAPFHETKGLGPYAFYDIIDGREA 1915
Query: 60 --QSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHV 117
+++ SL N EA A EI+ KK IGII+PYK Q+ ++ R
Sbjct: 1916 HGKNSGAMSLCNEHEADAAIEILRFFKKRYPAEFIGGRIGIITPYKCQLSLLRSRFLNAF 1975
Query: 118 SVYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVG 156
T + +VDGFQG E D++++STVR+ +G
Sbjct: 1976 G-SSTIADIEFNTVDGFQGREVDILLLSTVRAGHSGTAA 2013
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 2 LNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ- 60
L VQYRMHP +S FPS FY G L + V E + F + G+E+
Sbjct: 706 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEI 765
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
S S N EAA + +I+ K IG+I+PY+ Q I + ++ ++
Sbjct: 766 SASGTSYLNRTEAANVEKIVTTFLKSGV---VPSQIGVITPYEGQRAYIVNYMSRNGALR 822
Query: 121 DT-YFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
Y + V SVD FQG E+D II+S VRSN + +GFL++
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 863
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 2 LNVQYRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQ- 60
L VQYRMHP +S FPS FY G L + V E + F + G+E+
Sbjct: 706 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEI 765
Query: 61 SNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVY 120
S S N EAA + +I+ K IG+I+PY+ Q I + ++ ++
Sbjct: 766 SASGTSYLNRTEAANVEKIVTTFLKSGV---VPSQIGVITPYEGQRAYIVNYMSRNGALR 822
Query: 121 DT-YFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
Y + V SVD FQG E+D II+S VRSN + +GFL++
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 863
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 620 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 678
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 679 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 731
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 732 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 773
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 620 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 678
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 679 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 731
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 732 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 773
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 620 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 678
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 679 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 731
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 732 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 773
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 361 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 419
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 420 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 472
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 473 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 514
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 361 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 419
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 420 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 472
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 473 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 514
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 6 YRMHPSISMFPSKEFYNGKLFDAPNVRELSYDKHFLEGKMYASYSFINISKGKEQSNHDF 65
YR HP I PSK FY G+L + FL K + F I E+ ++
Sbjct: 361 YRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEFPVL-FFGIQGCDEREGNNP 419
Query: 66 SLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEIQERVKQHVSVYDTYFS 125
S N +E + + E +G L + R + IGII+PY+ QV +I++ + +++ + D
Sbjct: 420 SWFNRIEVSKVVETVGKLIN-GGKIREE-DIGIITPYRQQVLKIKQTL-ENLEMPD---- 472
Query: 126 VSVRSVDGFQGGEEDLIIISTVRS-------NRNGNVGFLSN 160
V V SV+ FQG E+++II+STVRS +R +GFLSN
Sbjct: 473 VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSN 514
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 1 MLNVQYRMHPSISMFPSKEFYNGK-----------LFDAPNVRELSYDKHFLEGKMYASY 49
ML VQYRMH I + SKE YN K L+D V++ S + L +
Sbjct: 436 MLTVQYRMHQLIMDWSSKELYNSKVKAHACVASHMLYDLEGVKKTSSTEPTL---LLIDT 492
Query: 50 SFINISKGKEQSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQVFEI 109
+ ++ + K++ D +L A+A + K++ IGII+PY AQV +
Sbjct: 493 AGCDMEEKKDE--EDSTLNEGESEVAMA----HAKRLVQSGVLPSDIGIITPYAAQVVLL 546
Query: 110 QERVKQHVSVYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+ + S+ D + + +VDGFQG E++ IIIS VRSN VGFLS+
Sbjct: 547 KMLKNKENSLKD----IEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 593
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 2 LNVQYRMHPSISMFPSKEFYNGKLFDAPNV-RELSYDKHF-------------LEGKM-Y 46
L QYRM+ +I+ + SKE Y G L + V L D F L+ +M Y
Sbjct: 683 LTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPY 742
Query: 47 ASYSFINISKGKEQSNHDFSLKNMVEAAAIAEIIGNLKKVCARTRTKLSIGIISPYKAQV 106
S S I + +Q+ SL N EA + + + +L +I + SPY AQV
Sbjct: 743 GSLS-IGCEEHLDQAGTG-SLYNEGEADIVLQHVFSLIYAGVSPN---AIVVQSPYVAQV 797
Query: 107 FEIQERVKQHVSVYDTYFSVSVRSVDGFQGGEEDLIIISTVRSNRNGNVGFLSN 160
+++ + T V ++D FQG E D +I+S VRSN G VGFL +
Sbjct: 798 QLLRDMLDGVPEAAGT----EVSTIDSFQGREADAVILSMVRSNTLGAVGFLGD 847