Miyakogusa Predicted Gene

Lj2g3v2475540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2475540.1 tr|G7J7W0|G7J7W0_MEDTR Intracellular protease
OS=Medicago truncatula GN=MTR_3g064140 PE=4 SV=1,86.02,0,Class I
glutamine amidotransferase-like,NULL; PUTATIVE THIJ FAMILY
INTRACELLULAR PROTEASE/AMIDASE,NU,CUFF.38994.1
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064140.1 | class I glutamine amidotransferase superfamily...   338   1e-93
Medtr3g064093.1 | DJ-1/PfpI family protein | HC | chr3:28828715-...    59   3e-09
Medtr3g064115.1 | DJ-1/PfpI family protein | LC | chr3:28838053-...    55   3e-08

>Medtr3g064140.1 | class I glutamine amidotransferase superfamily
           protein | HC | chr3:28843633-28840043 | 20130731
          Length = 387

 Score =  338 bits (868), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 160/186 (86%), Positives = 170/186 (91%)

Query: 7   IFQLQDYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYD 66
           +F   DYMEDYEV VPFQSLQALGCHVDAVCP KKAGDTCPTA+HDFEGDQTYSEKPG++
Sbjct: 200 LFICGDYMEDYEVKVPFQSLQALGCHVDAVCPSKKAGDTCPTAVHDFEGDQTYSEKPGHN 259

Query: 67  FTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILA 126
           F L A +D + PS YDALVIPGGRSP YL+LN++VIALVKHFME+KKPVASICHGQQILA
Sbjct: 260 FALTATFDDVDPSGYDALVIPGGRSPEYLSLNEAVIALVKHFMENKKPVASICHGQQILA 319

Query: 127 AAGVLKGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMV 186
           AAGVLKGRKCTAYPAVKLNVVLS ATWLEPDPI RCFTDGNLVTGAAWPGHPEFI QLM 
Sbjct: 320 AAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFIAQLMA 379

Query: 187 LLGIQV 192
           LLGIQV
Sbjct: 380 LLGIQV 385



 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/181 (53%), Positives = 126/181 (69%)

Query: 12  DYMEDYEVTVPFQSLQALGCHVDAVCPKKKAGDTCPTAIHDFEGDQTYSEKPGYDFTLNA 71
           D+MEDYE  VPFQ+LQA G  VDAVCP KK+GD C TA+H   G QTY+E  G++FTLNA
Sbjct: 12  DFMEDYEGMVPFQALQAFGVSVDAVCPGKKSGDVCRTAVHILSGGQTYTETVGHNFTLNA 71

Query: 72  DYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAGVL 131
            +D +  +SYD L +PGGR+P YLA   SV+ LV  F++S K +A ICHG  ILAAAGV+
Sbjct: 72  TFDEVDHTSYDGLWLPGGRAPEYLAHIPSVVELVTKFVKSGKEIACICHGHLILAAAGVV 131

Query: 132 KGRKCTAYPAVKLNVVLSRATWLEPDPIERCFTDGNLVTGAAWPGHPEFIPQLMVLLGIQ 191
           +GRKCTA+P VK  +V + A W+EPD +     DGNL+T   + GHPE +   +  LG +
Sbjct: 132 EGRKCTAFPPVKPVLVAAGAHWVEPDTMSTTVVDGNLITAPTYEGHPELLRHFLKALGGK 191

Query: 192 V 192
           +
Sbjct: 192 I 192


>Medtr3g064093.1 | DJ-1/PfpI family protein | HC |
           chr3:28828715-28828203 | 20130731
          Length = 92

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 22/99 (22%)

Query: 57  QTYSEKPGYDFTLNADYDGLKPSSYDALVIPGGRSPAYLALNQSVIALVKHFMESKKPVA 116
           QTY E  G+ FTLN  +D +  ++   +++  G+                      + +A
Sbjct: 7   QTYIETVGHKFTLNRTFDEIDHTNLVDMLVNSGQ----------------------EIIA 44

Query: 117 SICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSRATWLE 155
            ICHG  I AAA +L+G KCTA+P +KL ++ + A W E
Sbjct: 45  CICHGHMIQAAANLLEGPKCTAFPPLKLVLIAAGAFWFE 83


>Medtr3g064115.1 | DJ-1/PfpI family protein | LC |
           chr3:28838053-28837425 | 20130731
          Length = 94

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 9/63 (14%)

Query: 72  DYDGLKPSSYDALVIPGGR--SPAYLALNQSVIALVKHFMESKKPVASICHGQQILAAAG 129
           D+  LKP     L+  G       YLAL    IALVK FME+KKPVASICH Q ILAAAG
Sbjct: 38  DFPPLKP----VLIAAGAHWVEHLYLAL---FIALVKPFMENKKPVASICHSQHILAAAG 90

Query: 130 VLK 132
           VLK
Sbjct: 91  VLK 93