Miyakogusa Predicted Gene

Lj2g3v2459310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2459310.1 Non Characterized Hit- tr|D7LZX4|D7LZX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.19,4e-17,seg,NULL,CUFF.38989.1
         (731 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g076140.1 | hypothetical protein | HC | chr5:32425329-3242...   344   2e-94
Medtr3g063210.1 | hypothetical protein | HC | chr3:28604148-2860...   216   9e-56

>Medtr5g076140.1 | hypothetical protein | HC |
           chr5:32425329-32428370 | 20130731
          Length = 651

 Score =  344 bits (883), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 217/435 (49%), Positives = 245/435 (56%), Gaps = 72/435 (16%)

Query: 285 PGKLVSVPATVSSLVMEKSNNGSGGGEIKRVAVKRNXXXXXXXXXXXXXXXXXXXXXXXN 344
           PGK+V+VPATV+SLVM+KSNNG G G +KRV VKRN                        
Sbjct: 281 PGKMVTVPATVTSLVMDKSNNGGGEG-VKRVNVKRNVASPRSMSPARGNVNGLNQQ---- 335

Query: 345 GRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNPLSEVDPNS 404
            RS SPAR NG      V+ +N         PSLSRNNSARK E SPYRRNPLSEVDPNS
Sbjct: 336 -RSMSPARGNG-----NVVNQNQQ-------PSLSRNNSARKTEVSPYRRNPLSEVDPNS 382

Query: 405 LAYPQSNTN---GKVQNKPKKEIEPEANQKSNIDMNDNTRNRTSNRVALEKGVGGNCKAK 461
           LAYPQSN N    KVQNK KKEIE E  QK  ++M DNTRNRT+NRV +EKGV  NC  K
Sbjct: 383 LAYPQSNANNGGSKVQNKGKKEIEVETIQKPTVEMRDNTRNRTNNRVGMEKGV--NCHTK 440

Query: 462 EHHQEEEIKVLPDNAVVKTVIVPSGVDNHKPQTLTXXXXXXXXXXDLDI-NPEALLNPPL 520
           E  Q+EEIKV+ DN +VK V++PSG+                   D D  NPE L NPP 
Sbjct: 441 E-QQQEEIKVMSDNTIVKNVVMPSGI---------TRSRSSRRSRDFDTANPEPLTNPPQ 490

Query: 521 T-YTSLLLEDIHNFHQKNTQQQPSVSLPACLTKACSILEAVADLXXXXXXXXXXXXHQGK 579
           T YTSLLLEDI NFHQKNT  QPSVSLPACL KACSILEAVADL            +   
Sbjct: 491 TSYTSLLLEDIQNFHQKNT-TQPSVSLPACLNKACSILEAVADLNSTTSSTFSRNEYNN- 548

Query: 580 RVADTKDPFXXXXXXXXXXXMEPSLHKYVTVKRGGSIDMDDQEXXXXXXXXXXXAQQHWG 639
            VA  +  F           MEPSLHKYVTVKRGGS+  +DQE            QQ W 
Sbjct: 549 -VAVPESSFVESELVVSDDVMEPSLHKYVTVKRGGSL-CEDQESSGSNSFTVSSGQQQWN 606

Query: 640 VXXXXXXXXXXXXTDCWTSRLNNSRDECQKCPXXXXXXXXXXDMVEARKKKTLNSERRDC 699
           +            +DCW+SRL NS++E  K                          RR+C
Sbjct: 607 I------CSSGDSSDCWSSRL-NSKEESLK--------------------------RREC 633

Query: 700 DHQHSGGIGRGRLGS 714
           DHQHSGGIGRGRL +
Sbjct: 634 DHQHSGGIGRGRLAT 648



 Score =  134 bits (337), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/227 (42%), Positives = 115/227 (50%), Gaps = 38/227 (16%)

Query: 1   MGACLXXXXXXXX---------XXXXXTAPPQPKNSEN----VVTVTMSKPEVVSPKNKK 47
           MGACL                      T P Q K+S+N        T+    VV  + K+
Sbjct: 1   MGACLSKKKASSSTSSSHPLSSTKSLSTPPTQQKHSDNNNVTETETTLKNNNVV--QEKQ 58

Query: 48  LDTEIAKEDEGQVKKEIFIIKHRKSHDE-RERN-CKIPPYSPQKNLQAKSGDGL-SSSEA 104
            D E+ +E     KKEIFIIKHRKSHDE RE+N  KI P++ Q N+ ++  DGL SSSE 
Sbjct: 59  QDPEVVEEP----KKEIFIIKHRKSHDEKREKNSIKITPFTVQHNVPSQQNDGLVSSSET 114

Query: 105 ESMGXXXXXXXXXXXXXPSTPNMAVTGVRTSSCTKEEVDAILIQCXXXXXXXXXXXXXXX 164
           ES+                    +V GVRTSSCTKEEVDAILIQC               
Sbjct: 115 ESLNSNNKVG-------------SVVGVRTSSCTKEEVDAILIQCGRLSRSSSGKAATSS 161

Query: 165 XXXXXXXXXXXFDFDHCD-NDAVSAEDETKR--ANGSDNSEEYDAAA 208
                      FDFDHCD ND++SAEDE KR  A+GSDNSEEYD  A
Sbjct: 162 SARKYSGSKRSFDFDHCDNNDSISAEDEQKRVHAHGSDNSEEYDGVA 208


>Medtr3g063210.1 | hypothetical protein | HC |
           chr3:28604148-28606752 | 20130731
          Length = 681

 Score =  216 bits (549), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 186/495 (37%), Positives = 236/495 (47%), Gaps = 104/495 (21%)

Query: 285 PGKLVSVPATVSSLVMEKSNN-GSGGGE-------IKRVAVKRNXXXXXXXXXXXXXXXX 336
           P K+VSVPATV+SLVM+KSNN G  GGE       +KR+ V+RN                
Sbjct: 243 PRKMVSVPATVTSLVMDKSNNNGCEGGESAAGTIGVKRITVRRNVGSP------------ 290

Query: 337 XXXXXXXNGRSQSPARANGIAANGKVLGENXXXXXXXXXPSLSRNNSARKAEHSPYRRNP 396
                    RSQSPARANG A +                      +S+RKAE SPYRRNP
Sbjct: 291 ---------RSQSPARANGNATSQSS----------------LSRSSSRKAEESPYRRNP 325

Query: 397 LSEVDPNSLAYPQS---NTNGKVQNKPKKEIEPEANQKSNIDMNDNTRNRTSNRVALEKG 453
           L+E++ NSLA P S   N N + Q++PKKEIE EAN+  N           S+R+AL+K 
Sbjct: 326 LNELEQNSLANPHSTVNNNNSRAQSRPKKEIETEANKIPN-----------SSRIALDKV 374

Query: 454 VGGNCKAKEHHQEEEIKVLPDNAVVKTVIVPSGV---DNHKPQTLTXXXXXXXXXX-DLD 509
              +CK K   Q+E++K++        V         +N KP  LT           +LD
Sbjct: 375 EDVSCKTK--LQDEDVKMMSSVTDNVVVKTVVVPPVVENLKPWRLTRSRSSRRSRDLELD 432

Query: 510 INPEALLNPPLTYTSLLLEDIHNFHQKNT---QQQPSVSLPACLTKACSILEAVADLXXX 566
            NPE LL PP +YTSLLL+DI NFHQKNT      P VSLPAC+ +ACSI+EAVA+    
Sbjct: 433 HNPEDLLIPPQSYTSLLLQDIQNFHQKNTPPPPSPPPVSLPACVARACSIVEAVANFNSN 492

Query: 567 XXXXXX-----------------------XXXHQGKRVADTKDPFXXXXXXXXXXXMEPS 603
                                             GKRVAD KD             +EPS
Sbjct: 493 SSSNLSGVEDRRNPPGFQSNRNEYDVLPGTSNSYGKRVADNKDRDVEYELIVYDDMVEPS 552

Query: 604 LHKYVTVKRGGSIDMDDQEXXXXXXXXXXXAQQHWGVXXXXXXXXXXXXT-DCWTSRLNN 662
           LHK+ T+ RG S +M++QE           A+    +            + DCWT+RLNN
Sbjct: 553 LHKFETMNRGSS-NMEEQESSGSNSLTVSSAKHRRNISSSSSWEPSSSDSKDCWTARLNN 611

Query: 663 SRDECQKCPXXXXXXXXXXDMVEARK------KKTLNSERRDCDHQHSGGIGRGRLGSNK 716
            ++E +K P              AR+      K  LNS+RR+ DHQH    GRGRLG+N 
Sbjct: 612 CKEEDKKSPLGMERRVSSV----ARRANIDGAKMKLNSKRRESDHQHDNETGRGRLGANN 667

Query: 717 GLHNTLPVVTAAAST 731
             H    VVTA AST
Sbjct: 668 VPH-MKQVVTAVAST 681



 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 78/183 (42%), Gaps = 57/183 (31%)

Query: 33  VTMSKPEVVSPKNKKLDTEIAKEDE-------GQVKKEIFIIKHRKSHDERERNCKIPPY 85
           +TMSKP+V +    KL   + K D+       GQVKKEIFIIKHRKSHD+ E+N  I   
Sbjct: 46  ITMSKPKVETQPQVKLKKALEKHDDDSVEKHKGQVKKEIFIIKHRKSHDDSEKNSSI--- 102

Query: 86  SPQKNLQAKSGDGLSSSEAESMGXXXXXXXXXXXXXPSTPNMAVTGVRTSSCTKEEVDAI 145
                      +G     AE M                       G+RTS+CTKE+VDAI
Sbjct: 103 -----------EG-----AELM-----------------------GMRTSNCTKEDVDAI 123

Query: 146 LIQC---XXXXXXXXXXXXXXXXXXXXXXXXXXFDFDHCDNDAVSAEDETKRANGSDNSE 202
           LI C                              DFDHCDND + + ++     G  NS+
Sbjct: 124 LIHCGRLSRNSSGKASSFREHRRRLSGSNRTRSNDFDHCDNDTIFSSEK-----GQKNSD 178

Query: 203 EYD 205
            Y+
Sbjct: 179 LYE 181