Miyakogusa Predicted Gene

Lj2g3v2448200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2448200.1 Non Characterized Hit- tr|I1MZN4|I1MZN4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20583 PE,82.89,0,60S
RIBOSOMAL PROTEIN L10,NULL; Ribosomal protein L16p/L10e,Ribosomal
protein L10e/L16; RIBOSOMAL_L1,CUFF.38976.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094230.1 | 60S ribosomal protein L10-2 | HC | chr3:430683...   423   e-118
Medtr2g090910.1 | 60S ribosomal protein L10-2 | HC | chr2:390367...   421   e-118
Medtr3g062600.1 | 60S ribosomal protein L10-2 | HC | chr3:282922...   418   e-117

>Medtr3g094230.1 | 60S ribosomal protein L10-2 | HC |
           chr3:43068367-43071164 | 20130731
          Length = 224

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/219 (91%), Positives = 212/219 (96%)

Query: 40  LGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           +GRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVSIGQVLLSVRCKDGNAVHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSRSD 219
           KPQG CARV+IGQVLLSVRCKD N+ HAQEALRRAKFKFPGRQKIIVSRKWGFTK++R+D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 220 YLRLKSENRIVADGVNCKVLGCHGPLANRAPGRAFLQAA 258
           YL+LKSENRI+ DGVN K+LGCHGPLANR PGRAFL A+
Sbjct: 181 YLKLKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLTAS 219


>Medtr2g090910.1 | 60S ribosomal protein L10-2 | HC |
           chr2:39036729-39034243 | 20130731
          Length = 223

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/219 (91%), Positives = 212/219 (96%)

Query: 40  LGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           +GRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVSIGQVLLSVRCKDGNAVHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSRSD 219
           KPQG CARV+IGQVLLSVRCKD N+ HAQEALRRAKFKFPGRQKIIVSRKWGFTK++R++
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAE 180

Query: 220 YLRLKSENRIVADGVNCKVLGCHGPLANRAPGRAFLQAA 258
           YL+LKSENRI+ DGVN K+LGCHGPLANR PGRAFL A+
Sbjct: 181 YLKLKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLNAS 219


>Medtr3g062600.1 | 60S ribosomal protein L10-2 | HC |
           chr3:28292218-28293552 | 20130731
          Length = 218

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/218 (92%), Positives = 207/218 (94%)

Query: 40  LGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           +GRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVG KKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGAKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM+KFAGKD FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDTFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVSIGQVLLSVRCKDGNAVHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSRSD 219
           KP GTCARVSIGQVLLSVRCK GN  HAQEALRRAKFKFPGRQKIIVSRKWGFTKLS ++
Sbjct: 121 KPLGTCARVSIGQVLLSVRCKSGNGDHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSHAE 180

Query: 220 YLRLKSENRIVADGVNCKVLGCHGPLANRAPGRAFLQA 257
           YL+LKSENRIV DGVN KVLGCHGPLANR PGRAFL A
Sbjct: 181 YLKLKSENRIVPDGVNAKVLGCHGPLANRQPGRAFLPA 218