Miyakogusa Predicted Gene
- Lj2g3v2448180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2448180.1 Non Characterized Hit- tr|I3T4M5|I3T4M5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.59,0,Eukaryotic type KH-domain (KH-domain type I),NULL;
RNA-BINDING PROTEIN RELATED,NULL; K homology RNA-,CUFF.38980.1
(284 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g075710.1 | RNA-binding KH domain protein | HC | chr5:3222... 444 e-125
Medtr5g075710.3 | RNA-binding KH domain protein | HC | chr5:3222... 396 e-110
Medtr3g062640.1 | RNA-binding KH domain protein | HC | chr3:2830... 394 e-110
Medtr7g074100.1 | RNA-binding KH domain protein | HC | chr7:2767... 389 e-108
Medtr5g075710.2 | RNA-binding KH domain protein | HC | chr5:3222... 386 e-107
Medtr8g006605.1 | RNA-binding KH domain protein | HC | chr8:7443... 364 e-101
Medtr8g006580.1 | RNA-binding KH domain protein | HC | chr8:7074... 364 e-101
Medtr8g005550.1 | RNA-binding KH domain protein | HC | chr8:2306... 364 e-101
Medtr8g005430.1 | RNA-binding KH domain protein | HC | chr8:8684... 358 4e-99
Medtr3g010220.1 | RNA-binding KH domain protein | HC | chr3:2351... 267 1e-71
Medtr2g005590.2 | RNA-binding KH domain protein | HC | chr2:2238... 233 1e-61
Medtr2g005590.3 | RNA-binding KH domain protein | HC | chr2:2237... 229 3e-60
Medtr2g005590.1 | RNA-binding KH domain protein | HC | chr2:2237... 229 3e-60
Medtr4g036415.1 | splicing factor-like protein | HC | chr4:13104... 99 4e-21
Medtr3g078050.1 | hypothetical protein | LC | chr3:35166985-3516... 90 3e-18
Medtr4g088135.1 | transmembrane protein, putative | LC | chr4:34... 78 1e-14
Medtr3g054280.1 | transmembrane protein, putative | LC | chr3:21... 78 1e-14
>Medtr5g075710.1 | RNA-binding KH domain protein | HC |
chr5:32222823-32219192 | 20130731
Length = 281
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/288 (76%), Positives = 251/288 (87%), Gaps = 11/288 (3%)
Query: 1 MSNMYN-QISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLN 59
MS +YN QISSP + RANSPNINMRSNFDVDSQYL E +AE+QKL PFMQ+LP C+RLLN
Sbjct: 1 MSGLYNNQISSPGTARANSPNINMRSNFDVDSQYLTELVAEYQKLGPFMQVLPLCTRLLN 60
Query: 60 QEILRASGKNGMLQNQGFSDFDRLQVLS--PGHMTSSELTPNFSGWNSLSHEQRLAGAQG 117
QEILRASGK+G++QNQGFSD+DR+Q S P M S + T +F+GWNSLSHE G
Sbjct: 61 QEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSLDTTSSFTGWNSLSHE-------G 113
Query: 118 LNMDWQAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYI 177
LN+DWQ PA+ +SHIVKK+LRLDIP +++ NFVGRLLGPRGNSLKRVEATTGCRV+I
Sbjct: 114 LNVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFI 173
Query: 178 RGKGSIKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVD 237
RGKGSIKD DKE+LLRGRPG+EHL+EPLHILIEAELP N+VD+RLRQAQEIIEE+LKPVD
Sbjct: 174 RGKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPVNVVDLRLRQAQEIIEELLKPVD 233
Query: 238 ESQDFYKRQQLRERAMLNSNFREESPQLSGSVSPFTSNE-IKRAKTDQ 284
ESQD YKRQQLRE AMLNS+FREESPQLSGS+SPFTSNE IKRAKTDQ
Sbjct: 234 ESQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSNEMIKRAKTDQ 281
>Medtr5g075710.3 | RNA-binding KH domain protein | HC |
chr5:32222391-32219192 | 20130731
Length = 266
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/257 (76%), Positives = 224/257 (87%), Gaps = 10/257 (3%)
Query: 31 SQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEILRASGKNGMLQNQGFSDFDRLQVLS--P 88
SQYL E +AE+QKL PFMQ+LP C+RLLNQEILRASGK+G++QNQGFSD+DR+Q S P
Sbjct: 17 SQYLTELVAEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKP 76
Query: 89 GHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDWQAPPAVPSSHIVKKILRLDIPMESYS 148
M S + T +F+GWNSLSHE GLN+DWQ PA+ +SHIVKK+LRLDIP +++
Sbjct: 77 SLMPSLDTTSSFTGWNSLSHE-------GLNVDWQRAPAISNSHIVKKMLRLDIPHDNHP 129
Query: 149 NLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGRPGYEHLSEPLHIL 208
NFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKD DKE+LLRGRPG+EHL+EPLHIL
Sbjct: 130 TFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNEPLHIL 189
Query: 209 IEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNSNFREESPQLSGS 268
IEAELP N+VD+RLRQAQEIIEE+LKPVDESQD YKRQQLRE AMLNS+FREESPQLSGS
Sbjct: 190 IEAELPVNVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRELAMLNSSFREESPQLSGS 249
Query: 269 VSPFTSNE-IKRAKTDQ 284
+SPFTSNE IKRAKTDQ
Sbjct: 250 LSPFTSNEMIKRAKTDQ 266
>Medtr3g062640.1 | RNA-binding KH domain protein | HC |
chr3:28307380-28305002 | 20130731
Length = 237
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/234 (81%), Positives = 208/234 (88%), Gaps = 2/234 (0%)
Query: 4 MYNQISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEIL 63
MYNQISSPSSQR NSPNINMRSNFD +SQYL E L+EHQKL PFMQ+LP CSRLLNQEIL
Sbjct: 1 MYNQISSPSSQRTNSPNINMRSNFDAESQYLMELLSEHQKLGPFMQVLPLCSRLLNQEIL 60
Query: 64 RASGKNGMLQN-QGFSDFDRLQVLSPGHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDW 122
R SGKNG+LQN QGF+DFDR+Q ++ HM SS+L PNF+GWNSLSH+ LA +GLNMDW
Sbjct: 61 RVSGKNGLLQNHQGFNDFDRMQFMNQSHMASSDLKPNFTGWNSLSHDM-LAEVKGLNMDW 119
Query: 123 QAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 182
Q P VP+SHIVKKILRLDIP + Y N NFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 120 QTAPVVPNSHIVKKILRLDIPKDGYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 179
Query: 183 IKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPV 236
IKDLDKE+LLRGRPGYEHLS+ LHILIEAELPANIVDVRLR AQEIIEE+LKPV
Sbjct: 180 IKDLDKEELLRGRPGYEHLSDELHILIEAELPANIVDVRLRHAQEIIEELLKPV 233
>Medtr7g074100.1 | RNA-binding KH domain protein | HC |
chr7:27677743-27671597 | 20130731
Length = 281
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/286 (72%), Positives = 230/286 (80%), Gaps = 13/286 (4%)
Query: 1 MSNMYNQISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQ 60
MS +YNQ + S RA SP I R + +VDSQYL+E LAEHQKL PF+Q+LP CSRLLNQ
Sbjct: 1 MSGLYNQ--NFSHARAASPQI--RPSSEVDSQYLSELLAEHQKLGPFLQVLPICSRLLNQ 56
Query: 61 EILRASGKNGMLQNQGFSDFDRLQVLSPGHMTSSELTPNFSG-----WNSLSHEQRLAGA 115
EILR SG ML NQGF DFDRLQ SP M SS L N SG WNSL E RL G
Sbjct: 57 EILRVSG---MLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMGAWNSLQQE-RLCGP 112
Query: 116 QGLNMDWQAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRV 175
G+NMDWQ+ PA PSS VK+ILRL+IP++++ N NFVGRLLGPRGNSLKRVEATTGCRV
Sbjct: 113 PGMNMDWQSAPASPSSFTVKRILRLEIPVDTFPNFNFVGRLLGPRGNSLKRVEATTGCRV 172
Query: 176 YIRGKGSIKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKP 235
YIRGKGSIKD +KED LRGRPGYEHL+E LHILIEA+LPAN+VD+RLRQAQEIIEE+LKP
Sbjct: 173 YIRGKGSIKDPEKEDKLRGRPGYEHLNENLHILIEADLPANVVDIRLRQAQEIIEELLKP 232
Query: 236 VDESQDFYKRQQLRERAMLNSNFREESPQLSGSVSPFTSNEIKRAK 281
VDESQDF KRQQLRE A+LNSNFREESP SGSVSPF S+ +KRAK
Sbjct: 233 VDESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAK 278
>Medtr5g075710.2 | RNA-binding KH domain protein | HC |
chr5:32222712-32219192 | 20130731
Length = 244
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/250 (76%), Positives = 218/250 (87%), Gaps = 10/250 (4%)
Query: 38 LAEHQKLRPFMQLLPSCSRLLNQEILRASGKNGMLQNQGFSDFDRLQVLS--PGHMTSSE 95
L E+QKL PFMQ+LP C+RLLNQEILRASGK+G++QNQGFSD+DR+Q S P M S +
Sbjct: 2 LIEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSLD 61
Query: 96 LTPNFSGWNSLSHEQRLAGAQGLNMDWQAPPAVPSSHIVKKILRLDIPMESYSNLNFVGR 155
T +F+GWNSLSHE GLN+DWQ PA+ +SHIVKK+LRLDIP +++ NFVGR
Sbjct: 62 TTSSFTGWNSLSHE-------GLNVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGR 114
Query: 156 LLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGRPGYEHLSEPLHILIEAELPA 215
LLGPRGNSLKRVEATTGCRV+IRGKGSIKD DKE+LLRGRPG+EHL+EPLHILIEAELP
Sbjct: 115 LLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPV 174
Query: 216 NIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNSNFREESPQLSGSVSPFTSN 275
N+VD+RLRQAQEIIEE+LKPVDESQD YKRQQLRE AMLNS+FREESPQLSGS+SPFTSN
Sbjct: 175 NVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSN 234
Query: 276 E-IKRAKTDQ 284
E IKRAKTDQ
Sbjct: 235 EMIKRAKTDQ 244
>Medtr8g006605.1 | RNA-binding KH domain protein | HC |
chr8:744315-740918 | 20130731
Length = 276
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/280 (70%), Positives = 229/280 (81%), Gaps = 12/280 (4%)
Query: 4 MYN-QISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEI 62
+YN SSP RA SP I S+ +DSQYL+E LAE+QKL PF+++LP+ SRLLNQEI
Sbjct: 6 LYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEI 62
Query: 63 LRASGKNGMLQNQGFSDFDRLQVLSPGHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDW 122
LR SG ML NQGF+DFDRL+ SP ++SS LT GWN+L HE RL G G+ MDW
Sbjct: 63 LRVSG---MLSNQGFADFDRLRHRSPSPLSSSNLT----GWNNLQHE-RLCGTPGMTMDW 114
Query: 123 QAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 182
Q PA PSS+ VK+ILRL+IP+++Y N NFVGRLLGPRGNSLKRVEATTGCRV+IRGKGS
Sbjct: 115 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGS 174
Query: 183 IKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDF 242
IKD DKE+ LRGRPGYEHL+EPLHILIEA+LPAN+VD+RLRQAQEIIEE+LKPVDES+DF
Sbjct: 175 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDF 234
Query: 243 YKRQQLRERAMLNSNFREESPQLSGSVSPFTSNEIKRAKT 282
KRQQLRE A+LNSN REESP SGSVSPF S+ +KRAKT
Sbjct: 235 IKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr8g006580.1 | RNA-binding KH domain protein | HC |
chr8:707473-703207 | 20130731
Length = 276
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/280 (70%), Positives = 229/280 (81%), Gaps = 12/280 (4%)
Query: 4 MYN-QISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEI 62
+YN SSP RA SP I S+ +DSQYL+E LAE+QKL PF+++LP+ SRLLNQEI
Sbjct: 6 LYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEI 62
Query: 63 LRASGKNGMLQNQGFSDFDRLQVLSPGHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDW 122
LR SG ML NQGF+DFDRL+ SP ++SS LT GWN+L HE RL G G+ MDW
Sbjct: 63 LRVSG---MLSNQGFADFDRLRHRSPSPLSSSNLT----GWNNLQHE-RLCGTPGMTMDW 114
Query: 123 QAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 182
Q PA PSS+ VK+ILRL+IP+++Y N NFVGRLLGPRGNSLKRVEATTGCRV+IRGKGS
Sbjct: 115 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGS 174
Query: 183 IKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDF 242
IKD DKE+ LRGRPGYEHL+EPLHILIEA+LPAN+VD+RLRQAQEIIEE+LKPVDES+DF
Sbjct: 175 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDF 234
Query: 243 YKRQQLRERAMLNSNFREESPQLSGSVSPFTSNEIKRAKT 282
KRQQLRE A+LNSN REESP SGSVSPF S+ +KRAKT
Sbjct: 235 IKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr8g005550.1 | RNA-binding KH domain protein | HC |
chr8:230618-227384 | 20130731
Length = 276
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/280 (70%), Positives = 229/280 (81%), Gaps = 12/280 (4%)
Query: 4 MYN-QISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEI 62
+YN SSP RA SP I S+ +DSQYL+E LAE+QKL PF+++LP+ SRLLNQEI
Sbjct: 6 LYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEI 62
Query: 63 LRASGKNGMLQNQGFSDFDRLQVLSPGHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDW 122
LR SG ML NQGF+DFDRL+ SP ++SS LT GWN+L HE RL G G+ MDW
Sbjct: 63 LRVSG---MLSNQGFADFDRLRHRSPSPLSSSNLT----GWNNLQHE-RLCGTPGMTMDW 114
Query: 123 QAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 182
Q PA PSS+ VK+ILRL+IP+++Y N NFVGRLLGPRGNSLKRVEATTGCRV+IRGKGS
Sbjct: 115 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGS 174
Query: 183 IKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDF 242
IKD DKE+ LRGRPGYEHL+EPLHILIEA+LPAN+VD+RLRQAQEIIEE+LKPVDES+DF
Sbjct: 175 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDF 234
Query: 243 YKRQQLRERAMLNSNFREESPQLSGSVSPFTSNEIKRAKT 282
KRQQLRE A+LNSN REESP SGSVSPF S+ +KRAKT
Sbjct: 235 IKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr8g005430.1 | RNA-binding KH domain protein | HC |
chr8:868473-864902 | 20130731
Length = 275
Score = 358 bits (918), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/280 (70%), Positives = 228/280 (81%), Gaps = 13/280 (4%)
Query: 4 MYN-QISSPSSQRANSPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEI 62
+YN SSP RA SP I S+ +DSQYL+E LAE+QKL PF+++LP+ SRLLNQEI
Sbjct: 6 LYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEI 62
Query: 63 LRASGKNGMLQNQGFSDFDRLQVLSPGHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDW 122
LR SG ML NQGF+DFDRL+ SP ++SS LT GWN+L HE RL G G+ MDW
Sbjct: 63 LRVSG---MLSNQGFADFDRLRHRSPSPLSSSNLT----GWNNLQHE-RLCGTPGMTMDW 114
Query: 123 QAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 182
Q PA PSS+ VK+ILRL+IP+++Y N NFVGRLLGPRGNSLKRVEATTGCRV+IRGKGS
Sbjct: 115 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGS 174
Query: 183 IKDLDKEDLLRGRPGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDF 242
IKD D+E L RGRPGYEHL+EPLHILIEA+LPAN+VD+RLRQAQEIIEE+LKPVDES+DF
Sbjct: 175 IKDPDQEKL-RGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDF 233
Query: 243 YKRQQLRERAMLNSNFREESPQLSGSVSPFTSNEIKRAKT 282
KRQQLRE A+LNSN REESP SGSVSPF S+ +KRAKT
Sbjct: 234 IKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 273
>Medtr3g010220.1 | RNA-binding KH domain protein | HC |
chr3:2351169-2345557 | 20130731
Length = 293
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 183/268 (68%), Gaps = 8/268 (2%)
Query: 18 SPNINMRSNFDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEILRASGKNGMLQNQGF 77
SP ++ S D QYL+E L E QK+ PFM +LP C RLLNQEILR + G G
Sbjct: 29 SPASSVISEHD---QYLSELLGERQKISPFMAVLPHCYRLLNQEILRVTTILGNASVLGQ 85
Query: 78 SDFDRLQVLSPGHMTS-SELTPNFSGWNSLSHEQRLAGAQGL-NMDWQAPPAVPSSHIVK 135
S + L+ G M S L PN GW S + + Q W +P S +VK
Sbjct: 86 SGLEHGSPLAAGGMFSKGGLDPN--GWVSRFQSEMPSLIQSSPTPSWLSPQGSSSGLLVK 143
Query: 136 KILRLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGR 195
K +R+DIP++S+ N NFVGRLLGPRGNSLKRVEA T CRV IRG+GSIKD +E+++RG+
Sbjct: 144 KTIRVDIPVDSFPNFNFVGRLLGPRGNSLKRVEANTECRVLIRGRGSIKDTAREEMMRGK 203
Query: 196 PGYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLN 255
PGYEHL+EPLHIL+EAELPA I+D RL QA+EI+E++L+PV+ES DFYK+QQLRE AM+N
Sbjct: 204 PGYEHLNEPLHILVEAELPAEIIDARLMQAREILEDLLRPVEESHDFYKKQQLRELAMIN 263
Query: 256 SNFREESPQLSGSVSPF-TSNEIKRAKT 282
REE +SGSVSPF S +KRAKT
Sbjct: 264 GTLREEGSPMSGSVSPFHNSLGMKRAKT 291
>Medtr2g005590.2 | RNA-binding KH domain protein | HC |
chr2:223815-220572 | 20130731
Length = 311
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/263 (49%), Positives = 172/263 (65%), Gaps = 7/263 (2%)
Query: 27 FDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEILR-ASGKNGMLQNQGFSDFDRLQV 85
F +YLAE LAE QKL PF+Q+LP +RLL QEI R +S +G + D
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 LSP--GHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDWQAPPAVPSSHIVKKILRLDIP 143
P H + + ++ + QR+ Q + W P +P++ IVK+++RLD+P
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVP 166
Query: 144 MESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGRPGYEHLSE 203
++ Y N NFVGR+LGPRGNSLKRVEA T CRVYIRG GS+KD KE+ L+ +PGYEHL E
Sbjct: 167 VDKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLKE 226
Query: 204 PLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNSNFREE-- 261
PLH+L+EAE P +I++ RL A ++E +LKPVDES D YK+QQLRE AM+N REE
Sbjct: 227 PLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLREESP 286
Query: 262 --SPQLSGSVSPFTSNEIKRAKT 282
SP +S S+SPF SN +KRAKT
Sbjct: 287 SMSPSMSPSMSPFNSNGMKRAKT 309
>Medtr2g005590.3 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 172/264 (65%), Gaps = 8/264 (3%)
Query: 27 FDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEILR-ASGKNGMLQNQGFSDFDRLQV 85
F +YLAE LAE QKL PF+Q+LP +RLL QEI R +S +G + D
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 LSP--GHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDWQAPPAVPSSHIVKKILRLDIP 143
P H + + ++ + QR+ Q + W P +P++ IVK+++RLD+P
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVP 166
Query: 144 MESYSN-LNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGRPGYEHLS 202
++ Y N NFVGR+LGPRGNSLKRVEA T CRVYIRG GS+KD KE+ L+ +PGYEHL
Sbjct: 167 VDKYPNQYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLK 226
Query: 203 EPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNSNFREE- 261
EPLH+L+EAE P +I++ RL A ++E +LKPVDES D YK+QQLRE AM+N REE
Sbjct: 227 EPLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLREES 286
Query: 262 ---SPQLSGSVSPFTSNEIKRAKT 282
SP +S S+SPF SN +KRAKT
Sbjct: 287 PSMSPSMSPSMSPFNSNGMKRAKT 310
>Medtr2g005590.1 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 172/264 (65%), Gaps = 8/264 (3%)
Query: 27 FDVDSQYLAEPLAEHQKLRPFMQLLPSCSRLLNQEILR-ASGKNGMLQNQGFSDFDRLQV 85
F +YLAE LAE QKL PF+Q+LP +RLL QEI R +S +G + D
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 LSP--GHMTSSELTPNFSGWNSLSHEQRLAGAQGLNMDWQAPPAVPSSHIVKKILRLDIP 143
P H + + ++ + QR+ Q + W P +P++ IVK+++RLD+P
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVP 166
Query: 144 MESYSN-LNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEDLLRGRPGYEHLS 202
++ Y N NFVGR+LGPRGNSLKRVEA T CRVYIRG GS+KD KE+ L+ +PGYEHL
Sbjct: 167 VDKYPNQYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLK 226
Query: 203 EPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNSNFREE- 261
EPLH+L+EAE P +I++ RL A ++E +LKPVDES D YK+QQLRE AM+N REE
Sbjct: 227 EPLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLREES 286
Query: 262 ---SPQLSGSVSPFTSNEIKRAKT 282
SP +S S+SPF SN +KRAKT
Sbjct: 287 PSMSPSMSPSMSPFNSNGMKRAKT 310
>Medtr4g036415.1 | splicing factor-like protein | HC |
chr4:13104578-13109685 | 20130731
Length = 767
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 10/125 (8%)
Query: 139 RLDIPMESYSNLNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKD--LDKEDLLRGRP 196
+L IPM+ Y NF+G ++GPRGN+ KR+E TG ++ IRGKGS+K+ L ++ L+ P
Sbjct: 217 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 276
Query: 197 GYEHLSEPLHILIEAELPANIVDVRLRQAQEIIEEILKPVDESQDFYKRQQLRERAMLNS 256
+E LH+L+EA+ D L A ++E++L+PVDE + +KRQQLRE A LN
Sbjct: 277 ---SENEDLHVLVEAD----TADA-LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNG 328
Query: 257 NFREE 261
R+E
Sbjct: 329 TIRDE 333
>Medtr3g078050.1 | hypothetical protein | LC |
chr3:35166985-35168852 | 20130731
Length = 234
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 20/127 (15%)
Query: 57 LLNQEILRASGKNGMLQNQGFSDFDRLQV--LSPGHMTSSELTPNFSGWNSLSHEQRLAG 114
L +Q+++++ ++ +NQGFSD+DR+Q + P M S + T +F+GWNSLSHE
Sbjct: 118 LYDQQLMKSYEEH---RNQGFSDYDRVQFGSVQPSLMPSLDTTSSFTGWNSLSHE----- 169
Query: 115 AQGLNMDWQAPPAVPSSHIVKKILRLDIPMESYSNLNFVGRLLGPRGNSLKRV----EAT 170
GLN+DWQ P V +SHIVKK+LRLDIP +++ GR L N+L + AT
Sbjct: 170 --GLNVDWQRAPTVSNSHIVKKMLRLDIPHDNHP----TGRYLKHYINALSIIRNHRRAT 223
Query: 171 TGCRVYI 177
C + I
Sbjct: 224 QTCGISI 230
>Medtr4g088135.1 | transmembrane protein, putative | LC |
chr4:34743214-34745096 | 20130731
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 51/165 (30%)
Query: 57 LLNQEILRASGKNGMLQNQGFSDFDRLQV--LSPGHMTSSELTPNFSGWNSLSHE----- 109
L +Q+++++ ++ +NQGFSD+DR+ + P M S + T +F+GWNSLSHE
Sbjct: 118 LYDQQLMKSYEEH---RNQGFSDYDRVHFGSVQPSLMPSLDTTSSFTGWNSLSHERSYTM 174
Query: 110 -------------------------------QRLAGA--QGLNMDWQAPPAVPSSHIVKK 136
+RL+ QGLN+DWQ P V +SHIVKK
Sbjct: 175 CYFYHVPIFPSITFSFFNLYFYLYPLTIKFAKRLSQILHQGLNVDWQRAPTVSNSHIVKK 234
Query: 137 ILRLDIPMESYSNLNFVGRLLGPRGNSLKRV----EATTGCRVYI 177
+LRLDIP +++ GR L N+L + AT C + I
Sbjct: 235 MLRLDIPHDNHP----TGRYLKHYINALSIIRNHRRATQTCGISI 275
>Medtr3g054280.1 | transmembrane protein, putative | LC |
chr3:21531025-21532907 | 20130731
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 51/165 (30%)
Query: 57 LLNQEILRASGKNGMLQNQGFSDFDRLQV--LSPGHMTSSELTPNFSGWNSLSHE----- 109
L +Q+++++ ++ +NQGFSD+DR+ + P M S + T +F+GWNSLSHE
Sbjct: 118 LYDQQLMKSYEEH---RNQGFSDYDRVHFGSVQPSLMPSLDTTSSFTGWNSLSHERSYTM 174
Query: 110 -------------------------------QRLAGA--QGLNMDWQAPPAVPSSHIVKK 136
+RL+ QGLN+DWQ P V +SHIVKK
Sbjct: 175 CYFYHVPIFPSITFSFFNLYFYLYPLTIKFAKRLSQILHQGLNVDWQRAPTVSNSHIVKK 234
Query: 137 ILRLDIPMESYSNLNFVGRLLGPRGNSLKRV----EATTGCRVYI 177
+LRLDIP +++ GR L N+L + AT C + I
Sbjct: 235 MLRLDIPHDNHP----TGRYLKHYINALSIIRNHRRATQTCGISI 275