Miyakogusa Predicted Gene

Lj2g3v2437090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2437090.1 Non Characterized Hit- tr|A5AZN9|A5AZN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.3,1e-18,seg,NULL,CUFF.38967.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g075400.1 | hypothetical protein | HC | chr5:32055351-3205...   285   3e-77
Medtr3g467150.1 | hypothetical protein | HC | chr3:27680826-2767...   189   2e-48
Medtr5g027970.2 | extra-large GTP-binding protein | HC | chr5:11...    53   4e-07
Medtr5g027970.1 | extra-large GTP-binding protein | HC | chr5:11...    53   4e-07
Medtr5g027970.3 | extra-large GTP-binding protein | HC | chr5:11...    52   6e-07
Medtr5g027970.4 | extra-large GTP-binding protein | HC | chr5:11...    52   6e-07
Medtr5g018510.1 | extra-large GTP-binding protein | HC | chr5:69...    48   8e-06
Medtr5g018510.2 | extra-large GTP-binding protein | HC | chr5:69...    48   9e-06

>Medtr5g075400.1 | hypothetical protein | HC |
           chr5:32055351-32052824 | 20130731
          Length = 314

 Score =  285 bits (729), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 161/313 (51%), Positives = 196/313 (62%), Gaps = 44/313 (14%)

Query: 2   LIDLETLYRGIPDESVNLTFQDLANVKSEE--------------------RTXXXXXXXX 41
           ++ LETLY GIPDESVNLTFQDLA+V + E                    RT        
Sbjct: 6   MLALETLYLGIPDESVNLTFQDLADVNTSENRKQATTNQPVSEVSNNVPIRTNLSPSSSL 65

Query: 42  XXXXXXDFSRGLEATSQNXXXXXXXXDFS------GHRGKHHHN-----------PPFNH 84
                 DFS+GL+A++Q+          +      GHR + +             P F+H
Sbjct: 66  AKIPSLDFSKGLQASNQHNHHHHDIGQGNSPWGQFGHRIEENREHVHVHVHVHDPPQFSH 125

Query: 85  ASGRAQNPRPRIEGGDHSGYSMSYDDMSVAXXXXXXXXXXXXXX--IPHSKICTICSSYA 142
           A+G  ++PR R  G DHS YS+SYDD+S A                IPHSKICTICS+Y 
Sbjct: 126 ANGSTKSPRSRTGGDDHSAYSLSYDDVSTASGRGGGGGSGGRRRPGIPHSKICTICSTYV 185

Query: 143 YVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKVGCCSWRYPG 202
           Y+FRTRCLVCGR YC RCV+IGMGEMVEGRKCI+CLGL+FSQRYI+RAGK+GCC+WRY  
Sbjct: 186 YIFRTRCLVCGRVYCSRCVKIGMGEMVEGRKCIECLGLKFSQRYIERAGKIGCCNWRYSA 245

Query: 203 TIKQAELMCAEKGPKRSRRSYDHHSGMVPTSRPKSPITRTSPSPHAIG-GHEHSYVMSSS 261
           T+KQAELMCAEKGP+RSRRSY   SG V  S  +SPIT    SPHAIG  +EHS+VMS++
Sbjct: 246 TMKQAELMCAEKGPRRSRRSYG-QSG-VANSTSRSPITPR--SPHAIGSNNEHSFVMSNT 301

Query: 262 FVAASPLHHHLPF 274
           F   SP H++LPF
Sbjct: 302 FSPFSPHHNNLPF 314


>Medtr3g467150.1 | hypothetical protein | HC |
           chr3:27680826-27678809 | 20130731
          Length = 272

 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/273 (43%), Positives = 151/273 (55%), Gaps = 18/273 (6%)

Query: 5   LETLYRGIPDESVNLTFQDLANVKSEERTXXXXXXXXXXXXXXDFSRGLEATSQNXXXXX 64
           LE LY+GIPDESVNLTFQDL N                       +R + + S +     
Sbjct: 15  LEELYQGIPDESVNLTFQDLPNWNRNITISEGSAINTP-------TRNIPSPSLSPMSMS 67

Query: 65  XXXDFSGHRGKHHHNPPFNHASGRAQNPRPRIEGGDHSGYSMSYDDMSVAXXXXXX--XX 122
              D      K + N  +N  + R +    +      S +SM YD MS            
Sbjct: 68  PTHDEFKKGFKVYSNHKYNQQNFRHRGVGVQSTPSKASEHSMGYDAMSGESLASGKGGAI 127

Query: 123 XXXXXXIPHSKICTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRF 182
                 IPHSKICTIC+ Y Y FRTRCLVCGR YC +CV+IGMGE+ EGRKCI+CLGLRF
Sbjct: 128 RRRRQGIPHSKICTICNDYVYFFRTRCLVCGRVYCKQCVEIGMGELREGRKCIECLGLRF 187

Query: 183 SQRYIDRAGKVGCCSWRYPGTIKQAELMCAEKGPKRS-RRSYDHHSGMVPTSRPKSPITR 241
           SQRYI+RAG +GC SWRYP T+KQ+EL  AEKGP+R+  + Y H S     + P+SP++ 
Sbjct: 188 SQRYIERAGLLGCLSWRYPSTLKQSELKWAEKGPRRNGDKGYGHQSRPTTPTTPRSPLSI 247

Query: 242 TSPSPHAIGGHEHSYVMSSSFVAASPLHHHLPF 274
            S S       E +Y MS+++   SP HH +P 
Sbjct: 248 ASSS-------EATYAMSAAYSPFSP-HHRVPL 272


>Medtr5g027970.2 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 839

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 133 KICTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGK 192
           ++C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G    +    + GK
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGK 228

Query: 193 VGCCSWRYPGTIKQAELMCAEK 214
                 R    ++  ++M AEK
Sbjct: 229 YSRVLSRLLSPLEVKQIMKAEK 250


>Medtr5g027970.1 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 839

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 133 KICTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGK 192
           ++C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G    +    + GK
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGK 228

Query: 193 VGCCSWRYPGTIKQAELMCAEK 214
                 R    ++  ++M AEK
Sbjct: 229 YSRVLSRLLSPLEVKQIMKAEK 250


>Medtr5g027970.3 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 605

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 133 KICTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGK 192
           ++C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G    +    + GK
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGK 228

Query: 193 VGCCSWRYPGTIKQAELMCAEK 214
                 R    ++  ++M AEK
Sbjct: 229 YSRVLSRLLSPLEVKQIMKAEK 250


>Medtr5g027970.4 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 605

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 133 KICTICSSYAYVFRTRCLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGK 192
           ++C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G    +    + GK
Sbjct: 169 RVCYRCGKGKWETKESCIVCNAKYCSSCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGK 228

Query: 193 VGCCSWRYPGTIKQAELMCAEK 214
                 R    ++  ++M AEK
Sbjct: 229 YSRVLSRLLSPLEVKQIMKAEK 250


>Medtr5g018510.1 | extra-large GTP-binding protein | HC |
           chr5:6910566-6904338 | 20130731
          Length = 907

 Score = 48.1 bits (113), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)

Query: 149 CLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKV--GCCSWRYPGTIKQ 206
           CLVC   YC  CV   MG M EGRKC+ C+G       ID + +V  G CS      + Q
Sbjct: 255 CLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFA-----IDESNRVNLGKCSRMLKRLLNQ 309

Query: 207 AE---LMCAEK 214
            E   +M AE+
Sbjct: 310 LEVRQIMKAER 320


>Medtr5g018510.2 | extra-large GTP-binding protein | HC |
           chr5:6910402-6904444 | 20130731
          Length = 908

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)

Query: 149 CLVCGRAYCWRCVQIGMGEMVEGRKCIDCLGLRFSQRYIDRAGKV--GCCSWRYPGTIKQ 206
           CLVC   YC  CV   MG M EGRKC+ C+G       ID + +V  G CS      + Q
Sbjct: 255 CLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFA-----IDESNRVNLGKCSRMLKRLLNQ 309

Query: 207 AE---LMCAEK 214
            E   +M AE+
Sbjct: 310 LEVRQIMKAER 320