Miyakogusa Predicted Gene

Lj2g3v2414570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2414570.1 Non Characterized Hit- tr|C5YVU5|C5YVU5_SORBI
Putative uncharacterized protein Sb09g013380 OS=Sorghu,48.57,5e-19,
,CUFF.38933.1
         (207 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g075190.1 | hypothetical protein | HC | chr5:31938146-3193...   233   1e-61

>Medtr5g075190.1 | hypothetical protein | HC |
           chr5:31938146-31937179 | 20130731
          Length = 182

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 134/181 (74%), Gaps = 3/181 (1%)

Query: 1   MKVKALGVFKSKIFKPCKKILHFFRFKPKKPVLIRALKSRSHKSKFQKPMSS--LLSVFR 58
           MKVKAL +FKSK  KPCKK++ FF+ KPKK + IRA +                LLSVF 
Sbjct: 1   MKVKALSIFKSKFLKPCKKLIFFFKLKPKKLIFIRAFRKAKSPKPSSPSKPMSSLLSVFC 60

Query: 59  SPKKSKDLGMLQGLKSPSNMLETPLFPSPLTPAFV-KASGGTEKREGSSQEVEDACRSFE 117
           SPKKS+D  MLQ  KSPSNM ETP+FPSPLTPA V K      K E SS+EVEDACRSFE
Sbjct: 61  SPKKSRDYNMLQSFKSPSNMQETPIFPSPLTPACVRKNQTEGSKSEASSEEVEDACRSFE 120

Query: 118 NYLVEMIVEEGKTRDLMDVEEFLYCWKNLKCPVFIDLVCRFYGELCKDLFSTDSEESEGL 177
           NYL EMIV EGKT+DLMDVEE LYCWKNLKCPVF+DLV RFYGELCKDLFS D+EE + L
Sbjct: 121 NYLAEMIVAEGKTKDLMDVEELLYCWKNLKCPVFVDLVSRFYGELCKDLFSPDNEEYDKL 180

Query: 178 R 178
           +
Sbjct: 181 K 181