Miyakogusa Predicted Gene

Lj2g3v2365920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2365920.1 Non Characterized Hit- tr|G7KFJ0|G7KFJ0_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,57.83,1e-18,
,gene.g43306.t1.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g074550.1 | tubby C 2 protein | HC | chr5:31690066-3168745...    98   2e-21
Medtr5g074560.1 | tubby C 2 protein | HC | chr5:31696200-3169375...    76   6e-15

>Medtr5g074550.1 | tubby C 2 protein | HC | chr5:31690066-31687451
          | 20130731
          Length = 196

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 5/83 (6%)

Query: 3  LETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRN----- 57
          +ETS+  Y G+   HIPIDLFGSKKHAG PRG+LAF DA GNI+F V+R PP+ N     
Sbjct: 1  METSDLEYTGTEDQHIPIDLFGSKKHAGVPRGILAFTDASGNIVFKVHRQPPDPNSSSSL 60

Query: 58 YKKKLLLDASGNIIFSIYRHESG 80
             KLLLD++ N +FSI+RH +G
Sbjct: 61 KDTKLLLDSNDNPLFSIHRHHNG 83


>Medtr5g074560.1 | tubby C 2 protein | HC | chr5:31696200-31693753
          | 20130731
          Length = 189

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 5/81 (6%)

Query: 1  MELETSES-SYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK 59
          ME+ETSE   Y G+   HIPIDLF SK+ A  PRG L F +A GN++F V   PPN    
Sbjct: 1  MEMETSEDWEYTGTEDEHIPIDLFCSKEDARVPRGTLEFTNASGNMVFKVQHQPPN---- 56

Query: 60 KKLLLDASGNIIFSIYRHESG 80
           KLLLD++ N +FSI+   +G
Sbjct: 57 PKLLLDSNDNPLFSIHHRHNG 77