Miyakogusa Predicted Gene

Lj2g3v2365800.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2365800.2 tr|B3GAU5|B3GAU5_WHEAT WRKY14 transcription
factor OS=Triticum aestivum PE=2 SV=1,44.58,7e-19,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.38900.2
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g074400.1 | WRKY transcription factor | HC | chr5:31617311...   117   6e-27
Medtr3g031220.1 | WRKY transcription factor | HC | chr3:26968677...    76   3e-14
Medtr3g031220.2 | WRKY transcription factor | HC | chr3:26968677...    75   4e-14

>Medtr5g074400.1 | WRKY transcription factor | HC |
           chr5:31617311-31613388 | 20130731
          Length = 581

 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/199 (46%), Positives = 106/199 (53%), Gaps = 17/199 (8%)

Query: 23  HPFMTTSFSDLLASPISEDKPRGGLSDRIAERTGSGVXXXXXXXXXXXXXXXXXXXXXXG 82
           HPFM+T+FSDLLASP S        + R   +  S                        G
Sbjct: 33  HPFMSTTFSDLLASPASASASDDNNNSRGVPKFKS-TPPPSLPLSPPPVSPSSYFSIPPG 91

Query: 83  LSPAELLDSPVLLNSSNILPSPTTGAFAAQS-FNWKSSSGGNQQVVKEEDKSFSNFSFXX 141
           LSPAE LDSPV+LNSSNILPSPTTGAFAAQS +NW ++S GNQQ+ KE      NFSF  
Sbjct: 92  LSPAEFLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKE------NFSFQT 145

Query: 142 XXXXXXXXXXXXXXXXXNVASXXXXXXPWSYQEATKQDS------MMMKTE-NSSSMQSF 194
                                       WSY E T Q++      M+  TE N+SSMQSF
Sbjct: 146 QQQGPVVSASTTTFQSS-TVGGVQQQQQWSYIENTNQNAFSSEKNMIQTTENNNSSMQSF 204

Query: 195 SPEIASVQTNH-NNGFQSD 212
           SPEIASVQTN+ NNGFQSD
Sbjct: 205 SPEIASVQTNNTNNGFQSD 223


>Medtr3g031220.1 | WRKY transcription factor | HC |
           chr3:26968677-26964090 | 20130731
          Length = 508

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 27/129 (20%)

Query: 82  GLSPAELLDSPVLLNSSNILPSPTTGAFA-AQSFNWKSSSGGNQQVVKEEDKSF-SNFSF 139
           G S +ELLDSPVLLNSS+ILPSPTTG+FA  Q FNWK++    Q+ VK E+++  S+FSF
Sbjct: 68  GFSLSELLDSPVLLNSSHILPSPTTGSFANNQGFNWKNNYEEKQENVKAEEETISSSFSF 127

Query: 140 XXXXXXXXXXXXXXXXXXXNVASXXXXXXPWSYQEATKQDSMMMKTENSSSMQSFSPEIA 199
                                +S       WS          M+K ENSSSMQSF+PE  
Sbjct: 128 QAQPAGFQ-------------SSNAIVQNGWS----------MVKAENSSSMQSFTPESN 164

Query: 200 SV--QTNHN 206
           S   Q N+N
Sbjct: 165 STSEQNNYN 173


>Medtr3g031220.2 | WRKY transcription factor | HC |
           chr3:26968677-26965824 | 20130731
          Length = 385

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 27/129 (20%)

Query: 82  GLSPAELLDSPVLLNSSNILPSPTTGAFA-AQSFNWKSSSGGNQQVVKEEDKSF-SNFSF 139
           G S +ELLDSPVLLNSS+ILPSPTTG+FA  Q FNWK++    Q+ VK E+++  S+FSF
Sbjct: 68  GFSLSELLDSPVLLNSSHILPSPTTGSFANNQGFNWKNNYEEKQENVKAEEETISSSFSF 127

Query: 140 XXXXXXXXXXXXXXXXXXXNVASXXXXXXPWSYQEATKQDSMMMKTENSSSMQSFSPEIA 199
                                +S       WS          M+K ENSSSMQSF+PE  
Sbjct: 128 QAQPAGFQ-------------SSNAIVQNGWS----------MVKAENSSSMQSFTPESN 164

Query: 200 SV--QTNHN 206
           S   Q N+N
Sbjct: 165 STSEQNNYN 173