Miyakogusa Predicted Gene

Lj2g3v2365720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2365720.1 tr|G7K5S4|G7K5S4_MEDTR Cation proton exchanger
OS=Medicago truncatula GN=MTR_5g074320 PE=4 SV=1,66,0.0000000005,
,CUFF.38881.1
         (56 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g074320.1 | cation/H+ exchanger 3 | LC | chr5:31565061-315...    69   1e-12
Medtr5g074380.1 | cation/H+ exchanger 2 | LC | chr5:31607538-316...    68   2e-12
Medtr5g074360.1 | cation/H+ exchanger 2 | LC | chr5:31596719-315...    63   8e-11
Medtr5g074340.1 | cation/H+ exchanger 2 | LC | chr5:31582617-315...    60   4e-10
Medtr8g093780.1 | cation/H+ exchanger 3 | HC | chr8:39238741-392...    54   5e-08

>Medtr5g074320.1 | cation/H+ exchanger 3 | LC |
           chr5:31565061-31562450 | 20130731
          Length = 751

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 39/50 (78%)

Query: 6   SMYPLFHTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           S+    H++ENTPSI+NLLE+SNP+ E PICFYVLHL  L  RS PLFID
Sbjct: 398 SLMACIHSQENTPSIINLLEMSNPSLENPICFYVLHLIQLRGRSTPLFID 447


>Medtr5g074380.1 | cation/H+ exchanger 2 | LC |
           chr5:31607538-31603607 | 20130731
          Length = 859

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 37/44 (84%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           H++ENTPSI+NLLE+SNP+ E PICFYVLHL  L  RS PLF+D
Sbjct: 520 HSQENTPSIINLLEMSNPSLENPICFYVLHLIQLRGRSAPLFVD 563


>Medtr5g074360.1 | cation/H+ exchanger 2 | LC |
           chr5:31596719-31593337 | 20130731
          Length = 820

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 35/44 (79%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           H +EN PS++NLLE+SNP+  +PICFYVLHL  L  RS PLFID
Sbjct: 475 HDQENIPSMINLLEMSNPSLRSPICFYVLHLIQLAGRSTPLFID 518


>Medtr5g074340.1 | cation/H+ exchanger 2 | LC |
           chr5:31582617-31577804 | 20130731
          Length = 823

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 36/44 (81%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFID 55
           H++ENTPSI+NLLE+S+P+ + PICFYVLHL  L  R  P+FID
Sbjct: 476 HSQENTPSIINLLEMSSPSLKNPICFYVLHLIQLRGRVTPVFID 519


>Medtr8g093780.1 | cation/H+ exchanger 3 | HC |
           chr8:39238741-39236001 | 20130731
          Length = 831

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query: 12  HTEENTPSILNLLEISNPTRETPICFYVLHLNLLIVRSGPLFI 54
           HT  N P+++NLLE SNPT+++PIC YV+HL  L  R+  L I
Sbjct: 460 HTPRNVPTMINLLEASNPTKKSPICIYVVHLVELTGRTSALLI 502